You are here

Home

M747DRAFT_328460-T1, M747DRAFT_328460-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_328460-T1
Unique NameM747DRAFT_328460-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:324175..325768+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_328460-T1 ID=M747DRAFT_328460-T1|Name=M747DRAFT_328460-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1594bp|location=Sequence derived from alignment at KZ851902.1:324175..325768+ (Aspergillus niger ATCC 13496)
CCGGGAGAAGTTTATCTCCCTCCCTCTCTCTCTCTCTTTTCTTTTGCTTC
TCCTTATCTAGCTTTTGTGATATTCTTCATACCCACTCCGCTAAACTACT
GCCAACATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCAC
CTTCATCATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTATGCT
CAGCAGCGCCCGGATAATGATGAGCAGATCGCTAAATTTCTCCATTTCAA
CAGGTCAAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCAT
GACTCGCTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACG
TCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGA
TTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACA
CTTTGAGCGCTTCCTGCTTGGTGCTGGTATGAGCTATCAATATATCAGTC
TACTGAGAATGAGCCAGGCTAATTTGTATCTCATCTTCTAGACCCCAGAG
ATACCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGC
AGAAAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTG
GGACCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCG
GCGCTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCT
TCGGCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGG
CCCTGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCA
AGCAGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTAC
ATGTCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGC
GGAAGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACT
TCGACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACC
ACCGGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGG
CCGTAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGA
CGGAGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTT
GTTCCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACC
CAATACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACTG
TTGAGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAG
GGATACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCT
AAACCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCAC
CCCAAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGA
GCAGTATTTCGACGAAAATCTTGACGGTTTTTCTAGAAGATGCTTGATGG
CATATTTCCTATCTGTGACGAGATTAGCATTTTACTTACTACGC
back to top

Coding sequence (CDS) from alignment at KZ851902.1:324175..325768+

>M747DRAFT_328460-T1 ID=M747DRAFT_328460-T1|Name=M747DRAFT_328460-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3807bp|location=Sequence derived from alignment at KZ851902.1:324175..325768+ (Aspergillus niger ATCC 13496)
ATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCAT
CATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTCAAAGGAGGTC
ACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAA
TACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTG
CGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCG
GTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTG
CTTGGTGCTGACCCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCG
GGGATCGATGTTCTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAG
TGATTGATTTGGCTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCC
GTTTACAAGCTCATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTG
CACTGGACCCCAGCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCA
AGGTCGCTCTTCCCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAG
AACGTCGACTACCTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCC
TCTGCGGGTCGACTGCTACATGTCCCTGAACGTTCCATACACAATTGAGC
TGGTCAAGCGTTGTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAA
TGCTTGACCCCGGATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCA
CCCCACTGTCAAGTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTT
TCCGAAAGCTCGTGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTC
ATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAG
TGCCTACGACCTCCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACC
ACTTTGTGGTTTCGCAACCCAATACACCCTTCCAGGAATACCTCGCCAAC
TCTGCAGATGGACACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAA
CGAGCCGATCCCTACTAAGGGATACCTGGATGTATCGATCCTGGACAAGC
CGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCT
TCAATTCTCACTCCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAA
CCAGCAGGAGTCTACTTGAATGGGTTCTACCGGACAATTTCCCCGCATCA
AAGAGATCCGCACCTTCATCATTGATGGTGTGGGATCCGGAGGTGATTAT
CATAATGTCAAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCC
CATGACTCGCTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTA
ACGTCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAG
GGATTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCA
ACACTTTGAGCGCTTCCTGCTTGGTGCTGACCCCAGAGATACCAATGACC
TGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAAGGTCTC
CCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCTTCTGGG
CAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTACCCGTT
CGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCCAAGGCC
ATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGACGAGGG
TACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGCGGGAAT
CAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCCCTGAAC
GTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGGAATCAA
CATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACGGTCATG
CGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGAGAGCAC
GAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAACTTGGA
CATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGTTGCTCA
AGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCTCACGCA
TCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATACACCCTT
CCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGCCCGTCT
TCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATACCTGGAT
GTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCCTGCTGC
GTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAAAGGCAC
TGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGAATGGGTTCTACC
GGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCATCATTGATGGTGT
GGGATCCGGAGGTGATTATCATAATGTCAAAGGAGGTCACTGGTTGATTG
ACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAATACCGTGGCTCT
CGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTGCGTCGAGATTGA
AGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCGGTGGTCCCCCAG
CTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTGCTTGGTGCTGAC
CCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTT
CTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGG
CTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTC
ATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCA
GCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTC
CCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTAC
CTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGA
CTGCTACATGTCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTT
GTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCCCG
GATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAA
GTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCG
TGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGT
GGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCT
CCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGTTT
CGCAACCCAATACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGA
CACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCC
TACTAAGGGATACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCC
TCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACT
CCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTC
TACTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050032L-rhamnonate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_328460M747DRAFT_328460Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328460-T1M747DRAFT_328460-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328460-T1.utr5p1M747DRAFT_328460-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328460-T1.exon1M747DRAFT_328460-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_328460-T1.exon2M747DRAFT_328460-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_328460-T1.exon3M747DRAFT_328460-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328460-T1.cdsM747DRAFT_328460-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328460-T1.utr3p1M747DRAFT_328460-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023444
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Productenolase C-terminal domain-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:324175..325768 +
Powered by Drupal