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M747DRAFT_328542-T1, M747DRAFT_328542-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_328542-T1
Unique NameM747DRAFT_328542-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:638237..640017-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_328542-T1 ID=M747DRAFT_328542-T1|Name=M747DRAFT_328542-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1781bp|location=Sequence derived from alignment at KZ851902.1:638237..640017- (Aspergillus niger ATCC 13496)
GACAGCCCCAGTGAGTTACTTGATCTTGTCCTTTGCTAACATATGGCTCT
GCTGTGTCCCTTTCAGCACTCTACGTCCGAGACTGACAGCCCAATTATAG
GCCGATCGGCATTTCGATAGATTCGCTTCTCGATCGCAACTGGCTTGTCG
AATAATTTATAGTGAGGGAAACGGAAAAGATGACAGTACCCGTTACTGAG
CGAGCATTGCAAGTATGCCTGACCTGCAAATTGAGAAAGAAGGCATGCGA
CAAGACACTGCCAACCTGTGGGTACTGCACCAAACGGAACCTGCCATGTC
GATACCAAGCTCCTCCGGCGGCTGAAGAAACGGGCACAGAAGCGACTACT
CAGATAGAAATAAATGCGATCTTGCTACAGATGGTTTCCCTGTTTGGCCC
ACCATCGGGAAATGTGTCCACAGCACCCAGAAGGACATGGTACCAAGTAT
GCCGCATCATCCAATTGGCAGACCTCTCGTTGCAGGAAATCAGTCGCCGG
TATTTCAGCAACTTCCACAAATGGCTTCCAGTAGTATCGTACGAAATCTT
TCAAGGAACTTTGGCCCAGTACAATAGCCCGTCTTGCCCACCACCGGTGG
ACTATTCTGTCCTTGTGCTGGCTATGTGCCTGGTGACCCTGCAGCCGTCG
AGACTCAATACACACTTAACACCACATAGCCTATATGCCACTATGAAGAT
GCTATTCGCGGAAGCTCAAGCCATAATATGTGCCTCAACAAATTTACTTC
AGGCTGGACTGCTCATCGCTGCATATGAGTATGCCAACGGTCGGCCTGAG
GCAGCGAACATTACGATGGGGACTCTAGCCAGAACCGCTTTTGCAATTGG
GTTAGCAAATCCCAGCTCCTGGCAGACAAACGAAGCTAGTAATATCTCAC
TTGAAAGACTGGAGCGCCTAAATTTGTGGTGGGGTGTAATCATTCTCGAA
AGGTAGGTCAATTACAAGAAGATTTTGCACACATAGGCTCACCCAGCCTA
GGCTTATTCTATGCGAGATCAAAGACAAGACACAACGACCTACAACAGAA
TGTCCATCTTCTAAGTTTCCTCTGCCGAGTGACCTCCAGCCTATCCAAGC
TAGCCATCAATCAGTAGGAAGCTCCTCACATGAAAATCTGCCTTCGAACC
AGGACAGGAAACCCTGTGTTTTTGGCCATCAGGCACGAGCTGTGCTCCTC
CTTGATCGGGTGTTGGCAGTGCGAAGGCTCCCCCAAGCCGATAGTGGTAG
AACGGTAGAGATTCGGCAACTCGACGAGCAACTGCAAAGCTTTCTTTCAG
AACGGATAAATACAGCTACCGCGGAAATTGGCCATGATTGCAGTCCTATA
GCATCTGCCGTGAGGTATGTCAGCCGTAATCTCCCTGCCTTGTGACCCGA
AAGGGAATGGATATCCCTAGTCTGAAGGACCGCGCCACTCGGCTGCAGCT
AACTGATTCTGCCAGGGCGCTTTGCCTATTACATCAGGAAGTCATAGAGT
CTCCTTCCAACACCGTTGACTTGCAGAGTCTGCAATACTCACAGGCGGCT
CTAGGAATGGTATCTAATGTAGTGGTGGATGTCGCGCGCCACCACAAAGC
GCAAATTGCGTGCCAAAATTCCCATGCCGATCTACTACCCCTGAGCTGCT
CGTACACTCTGCACATGGCAATGAGACATATTCGGGATTGCAGGAAGCTA
GTCTGCCCATACAGCCGCTCTAGCGACCTGAACTCTCTAGTGCAGCTGGA
TCAAGAATTTTCCGACAGATGGAAAGCCTGA
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Coding sequence (CDS) from alignment at KZ851902.1:638237..640017-

>M747DRAFT_328542-T1 ID=M747DRAFT_328542-T1|Name=M747DRAFT_328542-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4356bp|location=Sequence derived from alignment at KZ851902.1:638237..640017- (Aspergillus niger ATCC 13496)
GGCGCTTTGCCTATTACATCAGGAAGTCATAGAGTCTCCTTCCAACACCG
TTGACTTGCAGAGTCTGCAATACTCACAGGCGGCTCTAGGAATGGTATCT
AATGTAGTGGTGGATGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCA
AAATTCCCATGCCGATCTACTACCCCTGAGCTGCTCGTACACTCTGCACA
TGGCAATGAGACATATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGC
CGCTCTAGCGACCTGAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGA
CAGATGGAAAGCCTGAGCTTATTCTATGCGAGATCAAAGACAAGACACAA
CGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGAGTGACCT
CCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCACATGAAA
ATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCATCAGGCA
CGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGCTCCCCCA
AGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAGCAACTGC
AAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAATTGGCCAT
GATTGCAGTCCTATAGCATCTGCCGTGAGATGACAGTACCCGTTACTGAG
CGAGCATTGCAAGTATGCCTGACCTGCAAATTGAGAAAGAAGGCATGCGA
CAAGACACTGCCAACCTGTGGGTACTGCACCAAACGGAACCTGCCATGTC
GATACCAAGCTCCTCCGGCGGCTGAAGAAACGGGCACAGAAGCGACTACT
CAGATAGAAATAAATGCGATCTTGCTACAGATGGTTTCCCTGTTTGGCCC
ACCATCGGGAAATGTGTCCACAGCACCCAGAAGGACATGGTACCAAGTAT
GCCGCATCATCCAATTGGCAGACCTCTCGTTGCAGGAAATCAGTCGCCGG
TATTTCAGCAACTTCCACAAATGGCTTCCAGTAGTATCGTACGAAATCTT
TCAAGGAACTTTGGCCCAGTACAATAGCCCGTCTTGCCCACCACCGGTGG
ACTATTCTGTCCTTGTGCTGGCTATGTGCCTGGTGACCCTGCAGCCGTCG
AGACTCAATACACACTTAACACCACATAGCCTATATGCCACTATGAAGAT
GCTATTCGCGGAAGCTCAAGCCATAATATGTGCCTCAACAAATTTACTTC
AGGCTGGACTGCTCATCGCTGCATATGAGTATGCCAACGGTCGGCCTGAG
GCAGCGAACATTACGATGGGGACTCTAGCCAGAACCGCTTTTGCAATTGG
GTTAGCAAATCCCAGCTCCTGGCAGACAAACGAAGCTAGTAATATCTCAC
TTGAAAGACTGGAGCGCCTAAATTTGTGGTGGGGTGTAATCATTCTCGAA
AGGGCGCTTTGCCTATTACATCAGGAAGTCATAGAGTCTCCTTCCAACAC
CGTTGACTTGCAGAGTCTGCAATACTCACAGGCGGCTCTAGGAATGGTAT
CTAATGTAGTGGTGGATGTCGCGCGCCACCACAAAGCGCAAATTGCGTGC
CAAAATTCCCATGCCGATCTACTACCCCTGAGCTGCTCGTACACTCTGCA
CATGGCAATGAGACATATTCGGGATTGCAGGAAGCTAGTCTGCCCATACA
GCCGCTCTAGCGACCTGAACTCTCTAGTGCAGCTGGATCAAGAATTTTCC
GACAGATGGAAAGCCTGAGCTTATTCTATGCGAGATCAAAGACAAGACAC
AACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGAGTGAC
CTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCACATGA
AAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCATCAGG
CACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGCTCCCC
CAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAGCAACT
GCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAATTGGCC
ATGATTGCAGTCCTATAGCATCTGCCGTGAGATGACAGTACCCGTTACTG
AGCGAGCATTGCAAGTATGCCTGACCTGCAAATTGAGAAAGAAGGCATGC
GACAAGACACTGCCAACCTGTGGGTACTGCACCAAACGGAACCTGCCATG
TCGATACCAAGCTCCTCCGGCGGCTGAAGAAACGGGCACAGAAGCGACTA
CTCAGATAGAAATAAATGCGATCTTGCTACAGATGGTTTCCCTGTTTGGC
CCACCATCGGGAAATGTGTCCACAGCACCCAGAAGGACATGGTACCAAGT
ATGCCGCATCATCCAATTGGCAGACCTCTCGTTGCAGGAAATCAGTCGCC
GGTATTTCAGCAACTTCCACAAATGGCTTCCAGTAGTATCGTACGAAATC
TTTCAAGGAACTTTGGCCCAGTACAATAGCCCGTCTTGCCCACCACCGGT
GGACTATTCTGTCCTTGTGCTGGCTATGTGCCTGGTGACCCTGCAGCCGT
CGAGACTCAATACACACTTAACACCACATAGCCTATATGCCACTATGAAG
ATGCTATTCGCGGAAGCTCAAGCCATAATATGTGCCTCAACAAATTTACT
TCAGGCTGGACTGCTCATCGCTGCATATGAGTATGCCAACGGTCGGCCTG
AGGCAGCGAACATTACGATGGGGACTCTAGCCAGAACCGCTTTTGCAATT
GGGTTAGCAAATCCCAGCTCCTGGCAGACAAACGAAGCTAGTAATATCTC
ACTTGAAAGACTGGAGCGCCTAAATTTGTGGTGGGGTGTAATCATTCTCG
AAAGGGCGCTTTGCCTATTACATCAGGAAGTCATAGAGTCTCCTTCCAAC
ACCGTTGACTTGCAGAGTCTGCAATACTCACAGGCGGCTCTAGGAATGGT
ATCTAATGTAGTGGTGGATGTCGCGCGCCACCACAAAGCGCAAATTGCGT
GCCAAAATTCCCATGCCGATCTACTACCCCTGAGCTGCTCGTACACTCTG
CACATGGCAATGAGACATATTCGGGATTGCAGGAAGCTAGTCTGCCCATA
CAGCCGCTCTAGCGACCTGAACTCTCTAGTGCAGCTGGATCAAGAATTTT
CCGACAGATGGAAAGCCTGAGCTTATTCTATGCGAGATCAAAGACAAGAC
ACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGAGTG
ACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCACAT
GAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCATCA
GGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGCTCC
CCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAGCAA
CTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAATTGG
CCATGATTGCAGTCCTATAGCATCTGCCGTGAGATGACAGTACCCGTTAC
TGAGCGAGCATTGCAAGTATGCCTGACCTGCAAATTGAGAAAGAAGGCAT
GCGACAAGACACTGCCAACCTGTGGGTACTGCACCAAACGGAACCTGCCA
TGTCGATACCAAGCTCCTCCGGCGGCTGAAGAAACGGGCACAGAAGCGAC
TACTCAGATAGAAATAAATGCGATCTTGCTACAGATGGTTTCCCTGTTTG
GCCCACCATCGGGAAATGTGTCCACAGCACCCAGAAGGACATGGTACCAA
GTATGCCGCATCATCCAATTGGCAGACCTCTCGTTGCAGGAAATCAGTCG
CCGGTATTTCAGCAACTTCCACAAATGGCTTCCAGTAGTATCGTACGAAA
TCTTTCAAGGAACTTTGGCCCAGTACAATAGCCCGTCTTGCCCACCACCG
GTGGACTATTCTGTCCTTGTGCTGGCTATGTGCCTGGTGACCCTGCAGCC
GTCGAGACTCAATACACACTTAACACCACATAGCCTATATGCCACTATGA
AGATGCTATTCGCGGAAGCTCAAGCCATAATATGTGCCTCAACAAATTTA
CTTCAGGCTGGACTGCTCATCGCTGCATATGAGTATGCCAACGGTCGGCC
TGAGGCAGCGAACATTACGATGGGGACTCTAGCCAGAACCGCTTTTGCAA
TTGGGTTAGCAAATCCCAGCTCCTGGCAGACAAACGAAGCTAGTAATATC
TCACTTGAAAGACTGGAGCGCCTAAATTTGTGGTGGGGTGTAATCATTCT
CGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_328542M747DRAFT_328542Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328542-T1M747DRAFT_328542-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328542-T1.cdsM747DRAFT_328542-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328542-T1.exon4M747DRAFT_328542-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_328542-T1.exon3M747DRAFT_328542-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_328542-T1.exon2M747DRAFT_328542-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_328542-T1.exon1M747DRAFT_328542-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328542-T1.utr5p2M747DRAFT_328542-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_328542-T1.utr5p1M747DRAFT_328542-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:638237..640017 -
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