You are here

M747DRAFT_328601-T1, M747DRAFT_328601-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_328601-T1
Unique NameM747DRAFT_328601-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:921318..922519+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_328601-T1 ID=M747DRAFT_328601-T1|Name=M747DRAFT_328601-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1202bp|location=Sequence derived from alignment at KZ851902.1:921318..922519+ (Aspergillus niger ATCC 13496)
ATCACCTCCCACTGTGCCACCACCATGCAGATATTCAAACGCATCTGGCC TCAACTATTCCCTGCCAAACCCACCCTCACGGCAGACAGTCTGCCTCCCC AAACTGGCCGCGTTGTGATCATCACCGGTGCCACCTCCGGTCTGGGGCTA GAATTGGCTCGCATCCTCTACCATGCTGGAGCAACCGTTTACATCGCCGC CCGCAACGAAACCAAGGCCCACAATGTCATAAACACCATCACCGCCACCA CTTCCCCCAATCCCACAACTCAGCCAGGCGAACTCATCTACCTCCCCATT GATCTCGCCGACCTTCGCACTATCCCTATCTTCGTGGACGCATTCCTCGC CCGCTCAAACAGACTAGACCTCCTCTTCAACAACGCCGCCGTGGCGTGTC TCCCCCCAACCCAGGTCACAGCCCAAGGCTACGAACCTCACATCGGCATC AACTGCGCAGCTCCCTACCTCCTGACCTCCCTCCTCTCTCCTATTTTGAC TTCTACAGCCCAAAGCCCATCTACACCACCCAACTCCGTCCGTGTCATCT TCACCTCCAGCATGGTCGTCGACTTCCTCGCTCCGACGGGCGGTGTTCCG TCCTCGGCCCTCACTTCTTCCCCGGATCCAAACTCAGACCCTAATACCAA CTACGCCATCAGCAAAACCGGTAACTGGTTCCTGGCGGCGCATTTTGCCT CTAACCTTGGGTCAAATGGTGTAGTCAGCATTACTCAGAATCCGGGGAAC ATTGATACCCCCATTTATGATAATGCGCCGAGATTGAGTGTGTGGGTTAG CAAACCGGTGTTCTATACTCCGGGGGTTGGTGTGAGTACCCTCCTTTGGG CGGGGTTTGAGGAGGGGATTACCGTGGATGATGGGGGCAGGTATGTGATA CCATTTGGGAGGTGGCATCCTGGTCCGAGGGAGGATTTGTTGGGGGCGAT GAGGGAGGGAGGATCGGGGGAGATGGGGAGGTTCGTGGAATGGTGTGAGA GGGTTACAAAGGAGTTTCGGTAGGAGGCCTTAAGCAGATATGTGTATGGT CGTATACATACTTGTGTAGAACACTACTACTTAGTGTAATTGAGCATGTT CAGTTATGTGAACTCTTGACATCCATGCAAAATAGTAACCCATTGACCAC AGTTTTCATTTCTCTGCCAGCTAGTCAGAAGCAGCCCTATCTCGTCATTT AA
back to top

Coding sequence (CDS) from alignment at KZ851902.1:921318..922519+

>M747DRAFT_328601-T1 ID=M747DRAFT_328601-T1|Name=M747DRAFT_328601-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1866bp|location=Sequence derived from alignment at KZ851902.1:921318..922519+ (Aspergillus niger ATCC 13496)
ATGCAGATATTCAAACGCATCTGGCCTCAACTATTCCCTGCCAAACCCAC
CCTCACGGCAGACAGTCTGCCTCCCCAAACTGGCCGCGTTGTGATCATCA
CCGGTGCCACCTCCGGTCTGGGGCTAGAATTGGCTCGCATCCTCTACCAT
GCTGGAGCAACCGTTTACATCGCCGCCCGCAACGAAACCAAGGCCCACAA
TGTCATAAACACCATCACCGCCACCACTTCCCCCAATCCCACAACTCAGC
CAGGCGAACTCATCTACCTCCCCATTGATCTCGCCGACCTTCGCACTATC
CCTATCTTCGTGGACGCATTCCTCGCCCGCTCAAACAGACTAGACCTCCT
CTTCAACAACGCCGCCGTGGCGTGTCTCCCCCCAACCCAGGTCACAGCCC
AAGGCTACGAACCTCACATCGGCATCAACTGCGCAGCTCCCTACCTCCTG
ACCTCCCTCCTCTCTCCTATTTTGACTTCTACAGCCCAAAGCCCATCTAC
ACCACCCAACTCCGTCCGTGTCATCTTCACCTCCAGCATGGTCGTCGACT
TCCTCGCTCCGACGGGCGGTGTTCCGTCCTCGGCCCTCACTTCTTCCCCG
GATCCAAACTCAGACCCTAATACCAACTACGCCATCAGCAAAACCGGTAA
CTGGTTCCTGGCGGCGCATTTTGCCTCTAACCTTGGGTCAAATGGTGTAG
TCAGCATTACTCAGAATCCGGGGAACATTGATACCCCCATTTATGATAAT
GCGCCGAGATTGAGTGTGTGGGTTAGCAAACCGGTGTTCTATACTCCGGG
GGTTGGTGTGAGTACCCTCCTTTGGGCGGGGTTTGAGGAGGGGATTACCG
TGGATGATGGGGGCAGTAACCCATTGACCACAGTTTTCATTTCTCTGCCA
GCTAGTCAGAAGCAGCCCTATCTCGTCATTTAAATGCAGATATTCAAACG
CATCTGGCCTCAACTATTCCCTGCCAAACCCACCCTCACGGCAGACAGTC
TGCCTCCCCAAACTGGCCGCGTTGTGATCATCACCGGTGCCACCTCCGGT
CTGGGGCTAGAATTGGCTCGCATCCTCTACCATGCTGGAGCAACCGTTTA
CATCGCCGCCCGCAACGAAACCAAGGCCCACAATGTCATAAACACCATCA
CCGCCACCACTTCCCCCAATCCCACAACTCAGCCAGGCGAACTCATCTAC
CTCCCCATTGATCTCGCCGACCTTCGCACTATCCCTATCTTCGTGGACGC
ATTCCTCGCCCGCTCAAACAGACTAGACCTCCTCTTCAACAACGCCGCCG
TGGCGTGTCTCCCCCCAACCCAGGTCACAGCCCAAGGCTACGAACCTCAC
ATCGGCATCAACTGCGCAGCTCCCTACCTCCTGACCTCCCTCCTCTCTCC
TATTTTGACTTCTACAGCCCAAAGCCCATCTACACCACCCAACTCCGTCC
GTGTCATCTTCACCTCCAGCATGGTCGTCGACTTCCTCGCTCCGACGGGC
GGTGTTCCGTCCTCGGCCCTCACTTCTTCCCCGGATCCAAACTCAGACCC
TAATACCAACTACGCCATCAGCAAAACCGGTAACTGGTTCCTGGCGGCGC
ATTTTGCCTCTAACCTTGGGTCAAATGGTGTAGTCAGCATTACTCAGAAT
CCGGGGAACATTGATACCCCCATTTATGATAATGCGCCGAGATTGAGTGT
GTGGGTTAGCAAACCGGTGTTCTATACTCCGGGGGTTGGTGTGAGTACCC
TCCTTTGGGCGGGGTTTGAGGAGGGGATTACCGTGGATGATGGGGGCAGT
AACCCATTGACCACAGTTTTCATTTCTCTGCCAGCTAGTCAGAAGCAGCC
CTATCTCGTCATTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_328601M747DRAFT_328601Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328601-T1.utr5p1M747DRAFT_328601-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328601-T1.exon1M747DRAFT_328601-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_328601-T1.exon2M747DRAFT_328601-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328601-T1.cdsM747DRAFT_328601-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328601-T1M747DRAFT_328601-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort-chain dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:921318..922519 +