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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851902.1:921318..922519+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_328601-T1 ID=M747DRAFT_328601-T1|Name=M747DRAFT_328601-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1202bp|location=Sequence derived from alignment at KZ851902.1:921318..922519+ (Aspergillus niger ATCC 13496)
ATCACCTCCCACTGTGCCACCACCATGCAGATATTCAAACGCATCTGGCC
TCAACTATTCCCTGCCAAACCCACCCTCACGGCAGACAGTCTGCCTCCCC
AAACTGGCCGCGTTGTGATCATCACCGGTGCCACCTCCGGTCTGGGGCTA
GAATTGGCTCGCATCCTCTACCATGCTGGAGCAACCGTTTACATCGCCGC
CCGCAACGAAACCAAGGCCCACAATGTCATAAACACCATCACCGCCACCA
CTTCCCCCAATCCCACAACTCAGCCAGGCGAACTCATCTACCTCCCCATT
GATCTCGCCGACCTTCGCACTATCCCTATCTTCGTGGACGCATTCCTCGC
CCGCTCAAACAGACTAGACCTCCTCTTCAACAACGCCGCCGTGGCGTGTC
TCCCCCCAACCCAGGTCACAGCCCAAGGCTACGAACCTCACATCGGCATC
AACTGCGCAGCTCCCTACCTCCTGACCTCCCTCCTCTCTCCTATTTTGAC
TTCTACAGCCCAAAGCCCATCTACACCACCCAACTCCGTCCGTGTCATCT
TCACCTCCAGCATGGTCGTCGACTTCCTCGCTCCGACGGGCGGTGTTCCG
TCCTCGGCCCTCACTTCTTCCCCGGATCCAAACTCAGACCCTAATACCAA
CTACGCCATCAGCAAAACCGGTAACTGGTTCCTGGCGGCGCATTTTGCCT
CTAACCTTGGGTCAAATGGTGTAGTCAGCATTACTCAGAATCCGGGGAAC
ATTGATACCCCCATTTATGATAATGCGCCGAGATTGAGTGTGTGGGTTAG
CAAACCGGTGTTCTATACTCCGGGGGTTGGTGTGAGTACCCTCCTTTGGG
CGGGGTTTGAGGAGGGGATTACCGTGGATGATGGGGGCAGGTATGTGATA
CCATTTGGGAGGTGGCATCCTGGTCCGAGGGAGGATTTGTTGGGGGCGAT
GAGGGAGGGAGGATCGGGGGAGATGGGGAGGTTCGTGGAATGGTGTGAGA
GGGTTACAAAGGAGTTTCGGTAGGAGGCCTTAAGCAGATATGTGTATGGT
CGTATACATACTTGTGTAGAACACTACTACTTAGTGTAATTGAGCATGTT
CAGTTATGTGAACTCTTGACATCCATGCAAAATAGTAACCCATTGACCAC
AGTTTTCATTTCTCTGCCAGCTAGTCAGAAGCAGCCCTATCTCGTCATTT
AA back to topCoding sequence (CDS) from alignment at KZ851902.1:921318..922519+ >M747DRAFT_328601-T1 ID=M747DRAFT_328601-T1|Name=M747DRAFT_328601-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1866bp|location=Sequence derived from alignment at KZ851902.1:921318..922519+ (Aspergillus niger ATCC 13496)
ATGCAGATATTCAAACGCATCTGGCCTCAACTATTCCCTGCCAAACCCAC
CCTCACGGCAGACAGTCTGCCTCCCCAAACTGGCCGCGTTGTGATCATCA
CCGGTGCCACCTCCGGTCTGGGGCTAGAATTGGCTCGCATCCTCTACCAT
GCTGGAGCAACCGTTTACATCGCCGCCCGCAACGAAACCAAGGCCCACAA
TGTCATAAACACCATCACCGCCACCACTTCCCCCAATCCCACAACTCAGC
CAGGCGAACTCATCTACCTCCCCATTGATCTCGCCGACCTTCGCACTATC
CCTATCTTCGTGGACGCATTCCTCGCCCGCTCAAACAGACTAGACCTCCT
CTTCAACAACGCCGCCGTGGCGTGTCTCCCCCCAACCCAGGTCACAGCCC
AAGGCTACGAACCTCACATCGGCATCAACTGCGCAGCTCCCTACCTCCTG
ACCTCCCTCCTCTCTCCTATTTTGACTTCTACAGCCCAAAGCCCATCTAC
ACCACCCAACTCCGTCCGTGTCATCTTCACCTCCAGCATGGTCGTCGACT
TCCTCGCTCCGACGGGCGGTGTTCCGTCCTCGGCCCTCACTTCTTCCCCG
GATCCAAACTCAGACCCTAATACCAACTACGCCATCAGCAAAACCGGTAA
CTGGTTCCTGGCGGCGCATTTTGCCTCTAACCTTGGGTCAAATGGTGTAG
TCAGCATTACTCAGAATCCGGGGAACATTGATACCCCCATTTATGATAAT
GCGCCGAGATTGAGTGTGTGGGTTAGCAAACCGGTGTTCTATACTCCGGG
GGTTGGTGTGAGTACCCTCCTTTGGGCGGGGTTTGAGGAGGGGATTACCG
TGGATGATGGGGGCAGTAACCCATTGACCACAGTTTTCATTTCTCTGCCA
GCTAGTCAGAAGCAGCCCTATCTCGTCATTTAAATGCAGATATTCAAACG
CATCTGGCCTCAACTATTCCCTGCCAAACCCACCCTCACGGCAGACAGTC
TGCCTCCCCAAACTGGCCGCGTTGTGATCATCACCGGTGCCACCTCCGGT
CTGGGGCTAGAATTGGCTCGCATCCTCTACCATGCTGGAGCAACCGTTTA
CATCGCCGCCCGCAACGAAACCAAGGCCCACAATGTCATAAACACCATCA
CCGCCACCACTTCCCCCAATCCCACAACTCAGCCAGGCGAACTCATCTAC
CTCCCCATTGATCTCGCCGACCTTCGCACTATCCCTATCTTCGTGGACGC
ATTCCTCGCCCGCTCAAACAGACTAGACCTCCTCTTCAACAACGCCGCCG
TGGCGTGTCTCCCCCCAACCCAGGTCACAGCCCAAGGCTACGAACCTCAC
ATCGGCATCAACTGCGCAGCTCCCTACCTCCTGACCTCCCTCCTCTCTCC
TATTTTGACTTCTACAGCCCAAAGCCCATCTACACCACCCAACTCCGTCC
GTGTCATCTTCACCTCCAGCATGGTCGTCGACTTCCTCGCTCCGACGGGC
GGTGTTCCGTCCTCGGCCCTCACTTCTTCCCCGGATCCAAACTCAGACCC
TAATACCAACTACGCCATCAGCAAAACCGGTAACTGGTTCCTGGCGGCGC
ATTTTGCCTCTAACCTTGGGTCAAATGGTGTAGTCAGCATTACTCAGAAT
CCGGGGAACATTGATACCCCCATTTATGATAATGCGCCGAGATTGAGTGT
GTGGGTTAGCAAACCGGTGTTCTATACTCCGGGGGTTGGTGTGAGTACCC
TCCTTTGGGCGGGGTTTGAGGAGGGGATTACCGTGGATGATGGGGGCAGT
AACCCATTGACCACAGTTTTCATTTCTCTGCCAGCTAGTCAGAAGCAGCC
CTATCTCGTCATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short-chain dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851902.1 | supercontig | KZ851902.1:921318..922519 + |
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