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M747DRAFT_328684-T1, M747DRAFT_328684-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_328684-T1
Unique NameM747DRAFT_328684-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:92508..93901+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_328684-T1 ID=M747DRAFT_328684-T1|Name=M747DRAFT_328684-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1394bp|location=Sequence derived from alignment at KZ851903.1:92508..93901+ (Aspergillus niger ATCC 13496)
ATTCCGCGCCGAAAAGTCAAACTCCGCAACCAATTCCCCTCTTCTCCGCC
CATTGCTCGCCGTCGACTATAATCTGAGCCTGCATACTGTGTCGCTTCGT
GCCTGTACTCGAATTAAACTCTCCGATACGGCTTTAATAACTCTTCGACA
AAATTTGACAGCGCATGGTGCGGGGAACCACGCCAAAACTTCCTCCATCT
TAATTTCGGCATACCGATTGAAGCACCTCCCAGATCACAATGCCTCTCGA
CACATCCACAACATATCCCCTCACCAAGCTTCGCCTTGATGGCCGTCGCT
GGAATGAGCTTCGACTGCTCCAGGCCCAGATCTCCACGAACCCCGCCAGT
TCGGGCTCATCCTACTTGGCCATGGGCAACACCGCGATCCTGTGCTCCGT
CCACGGTCCCGCAGAAGGACGTCGCGGTGATGCCACGGGTGGTGCTGCTG
GATCAGCAGGTGCGGTAGTAGAGGTGGATGTCAACGTTGCAGGATTTGCT
GGGGTGGATCGCAAGCGCAGAGCCGGCGGAAGTGATAAGTACGTTGCTCT
AGACTATCGTCATGTCTGATGTTTCTGCTGTGTCTGGTACTGACTATAAC
CTTGAATAGACAATCTTCGCGCGTCGCAACGATACTACGCTCTGCTTTCC
AGTCGCATCTCCATACCCACCTCTACCCTCACAGTACGATCAGCATCCAC
GTCTCAGTTTTGTCGTCAGACGGATCGCTTCTCGCGGCGGCAGTCAATGC
CTGTACGCTGGCGCTTGTGGATGCCGGTATTCCTATGCCAGGACTCCTCT
GTGGGTGTACGTCAGGAATGAGCGGCAGTGCGTCCACACCGCGGGACCCG
AATAATGACACATTGGATCCGCTGCTGGACTTGTCTCTGCCAGAGGAGCA
GGAGCTTCCGTTCCTTACGGTGGGGACTACGACGGCTGTACCGGTGGGCG
AGGCGGCTATGATTAATGAAGATGAGGACGAGATGAAGGTAGCAATGCTG
ACGATGGACTCCAAGGTGCATTGCACATACGTTGAAACAATGCTGGCGGT
GGGAATTGACGGGTGCAAGCAGATTCGGGAGATCTTGGAAGGCGTGATTA
AGAAGTCGGCACGCCGGTGATGACTTGGATTTGGATTCTGTTTCTTTATA
TCTGCTATCTGGGATCTTGTACAGGGCAGCGCGATAGGGCGAGTTCTGTT
TATACCCAGTGATTGCCATGGGAGGTGTTGGGCGCGGCGGGATGGATCGT
TTCAGTGTGATATTTGACTATTCCAGCGAATACAGACTCGGTTGCTAATC
CATATGCCTACTGTAGTATGTCTTATTCACTACATTTTCTGGGCCCATTG
GTCGAGGAGCTACCTGACTAATGTGCTCAAATCCTCGCAAAGAC
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Coding sequence (CDS) from alignment at KZ851903.1:92508..93901+

>M747DRAFT_328684-T1 ID=M747DRAFT_328684-T1|Name=M747DRAFT_328684-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1620bp|location=Sequence derived from alignment at KZ851903.1:92508..93901+ (Aspergillus niger ATCC 13496)
ATGCCTCTCGACACATCCACAACATATCCCCTCACCAAGCTTCGCCTTGA
TGGCCGTCGCTGGAATGAGCTTCGACTGCTCCAGGCCCAGATCTCCACGA
ACCCCGCCAGTTCGGGCTCATCCTACTTGGCCATGGGCAACACCGCGATC
CTGTGCTCCGTCCACGGTCCCGCAGAAGGACGTCGCGGTGATGCCACGGG
TGGTGCTGCTGGATCAGCAGGTGCGGTAGTAGAGGTGGATGTCAACGTTG
CAGGATTTGCTGGGGTGGATCGCAAGCGCAGAGCCGGCGGAAGTGATAAA
CAATCTTCGCGCGTCGCAACGATACTACGCTCTGCTTTCCAGTCGCATCT
CCATACCCACCTCTACCCTCACAGTACGATCAGCATCCACGTCTCAGTTT
TGTCGTCAGACGGATCGCTTCTCGCGGCGGCAGTCAATGCCTGTACGCTG
GCGCTTGTGGATGCCGGTATTCCTATGCCAGGACTCCTCTGTGGGTGTAC
GTCAGGAATGAGCGGCAGTGCGTCCACACCGCGGGACCCGAATAATGACA
CATTGGATCCGCTGCTGGACTTGTCTCTGCCAGAGGAGCAGGAGCTTCCG
TTCCTTACGGTGGGGACTACGACGGCTGTACCGGTGGGCGAGGCGGCTAT
GATTAATGAAGATGAGGACGAGATGAAGGTAGCAATGCTGACGATGGACT
CCAAGGTGCATTGCACATACGTTGAAACAATGCTGGCGGTGGGAATTGAC
GGGTGCAAGCAGATTCGGGAGATCTTGGAAGGCGTGATTAAGAAGTCGGC
ACGCCGGTGAATGCCTCTCGACACATCCACAACATATCCCCTCACCAAGC
TTCGCCTTGATGGCCGTCGCTGGAATGAGCTTCGACTGCTCCAGGCCCAG
ATCTCCACGAACCCCGCCAGTTCGGGCTCATCCTACTTGGCCATGGGCAA
CACCGCGATCCTGTGCTCCGTCCACGGTCCCGCAGAAGGACGTCGCGGTG
ATGCCACGGGTGGTGCTGCTGGATCAGCAGGTGCGGTAGTAGAGGTGGAT
GTCAACGTTGCAGGATTTGCTGGGGTGGATCGCAAGCGCAGAGCCGGCGG
AAGTGATAAACAATCTTCGCGCGTCGCAACGATACTACGCTCTGCTTTCC
AGTCGCATCTCCATACCCACCTCTACCCTCACAGTACGATCAGCATCCAC
GTCTCAGTTTTGTCGTCAGACGGATCGCTTCTCGCGGCGGCAGTCAATGC
CTGTACGCTGGCGCTTGTGGATGCCGGTATTCCTATGCCAGGACTCCTCT
GTGGGTGTACGTCAGGAATGAGCGGCAGTGCGTCCACACCGCGGGACCCG
AATAATGACACATTGGATCCGCTGCTGGACTTGTCTCTGCCAGAGGAGCA
GGAGCTTCCGTTCCTTACGGTGGGGACTACGACGGCTGTACCGGTGGGCG
AGGCGGCTATGATTAATGAAGATGAGGACGAGATGAAGGTAGCAATGCTG
ACGATGGACTCCAAGGTGCATTGCACATACGTTGAAACAATGCTGGCGGT
GGGAATTGACGGGTGCAAGCAGATTCGGGAGATCTTGGAAGGCGTGATTA
AGAAGTCGGCACGCCGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_328684M747DRAFT_328684Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328684-T1.utr5p1M747DRAFT_328684-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328684-T1.exon1M747DRAFT_328684-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_328684-T1.exon2M747DRAFT_328684-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328684-T1.cdsM747DRAFT_328684-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328684-T1.utr3p1M747DRAFT_328684-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_328684-T1M747DRAFT_328684-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926407T
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR036345
DBxrefInterPro:IPR027408
DBxrefInterPro:IPR001247
DBxrefPFAM:PF01138
Productexosome complex endonuclease 1/ribosomal RNA processing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:92508..93901 +
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