You are here

Home

M747DRAFT_329208-T1, M747DRAFT_329208-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_329208-T1
Unique NameM747DRAFT_329208-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:992088..993410+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_329208-T1 ID=M747DRAFT_329208-T1|Name=M747DRAFT_329208-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1323bp|location=Sequence derived from alignment at KZ851904.1:992088..993410+ (Aspergillus niger ATCC 13496)
TTCATCTCAGATAATACCACCCACCCCTCTTTCATCATGCCTCCCAAGAA
GACTTCCACCACCGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCT
ACCGTGGTATGTTTTGACTGATCTTCCACCACCAACCCATCGCGTAGAAT
TGAAATTAATATCGTTTTTGTCGCGAATGACTGCTGATTCCATGAATATA
GATATGATCAAGGATGCTATCCTGAATGTGAGTTAATCACGCTGTTCCCG
GTGCGCGTTGGGATGAACGGGCGCTGGGCGGGATCTCCGACCGTGACACG
TCTACACGGTGCTTAATTGTCCCAACGCCCCATCGGGCTCCTGCTTGTTT
CACCTCCCAAATGGGTCGCTGACTTCTTTCGCAACAGCTGAAAGAGCGCA
ATGGTAGCAGGTAAGTTGTTTGGTGCTTCTTCTCCCCCGCCCGATGCAGG
GTCCCGTTCGCTGGCGACGTGGCAACCTATCACCCTGTCCAGGTCGCGAT
CTCGGCTGACTCGTCTTGTTTCTCCTCGACTGTAGCCGCCAGTCGATCAA
GAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTCCACCAACGCCT
TCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAG
TTCCTTCAGCCCAAGGGTAAGTCAATCCGTCGCGCGCATTTTTTGCCTTC
TCATGTCGCAACGGCATTCGATACTCCTGACATGGAAGGATGTGTCTTGA
CTGCCGTCGTTCGCGTCTTTCATTTTTCGGTCTTGTTTTTTTTTGATGGG
GCGTGTCAACTGACGCGTCGTCAACCAGGCCCCTCCGGACCCGTGAAGCT
TGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGGTAAGTCTTTATC
AATGACATTTCGAACTGATAGAGAACTATTACTAACACTGTCCATAGAAG
ACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGA
GAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGG
CCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCC
AAGCCTCGCAAGTCCTCCACTACTGTAAGTTGTAGACTCCTGCCTTCTCA
CCCCCGGCGGACAGGGTATACTAATCTTGAAGCAGGCTCCCGCCGTTGTC
GACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGAC
GACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTG
CTGCAAAGGAGACTGCTGCTTAA
back to top

Coding sequence (CDS) from alignment at KZ851904.1:992088..993410+

>M747DRAFT_329208-T1 ID=M747DRAFT_329208-T1|Name=M747DRAFT_329208-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4368bp|location=Sequence derived from alignment at KZ851904.1:992088..993410+ (Aspergillus niger ATCC 13496)
ATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTC
GAGCCACGCCTCCTACCGTGATATGATCAAGGATGCTATCCTGAATCTGA
AAGAGCGCAATGGTAGCAGCCGCCAGTCGATCAAGAAATATGTTCAGGCG
AACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCAA
CAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAGG
GCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCT
GCTGCTAAGAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGC
CAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGA
CCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAG
GCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCTCCCGCCGTTGT
CGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGA
CGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCT
GCTGCAAAGGAGACTGCTGCTTAAATGCCTCCCAAGAAGACTTCCACCAC
CGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGATATGA
TCAAGGATGCTATCCTGAATCTGAAAGAGCGCAATGGTAGCAGCCGCCAG
TCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTCCAC
CAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTGAGA
AGGGCGAGTTCCTTCAGCCCAAGGGCCCCTCCGGACCCGTGAAGCTTGCC
AAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGAAGACTGCCACCAAGGC
TGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAGG
CCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGCT
AAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGTC
CTCCACTACTGCTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCA
CCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCC
ACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAT
GCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTCGA
GCCACGCCTCCTACCGTGATATGATCAAGGATGCTATCCTGAATCTGAAA
GAGCGCAATGGTAGCAGCCGCCAGTCGATCAAGAAATATGTTCAGGCGAA
CAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCAACA
AGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAGGGC
CCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGC
TGCTAAGAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGCCA
AGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGACC
ACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAGGC
TAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCTCCCGCCGTTGTCG
ACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACG
ACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGC
TGCAAAGGAGACTGCTGCTTAAATGCCTCCCAAGAAGACTTCCACCACCG
GCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGATATGATC
AAGGATGCTATCCTGAATCTGAAAGAGCGCAATGGTAGCAGCCGCCAGTC
GATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTCCACCA
ACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTGAGAAG
GGCGAGTTCCTTCAGCCCAAGGGCCCCTCCGGACCCGTGAAGCTTGCCAA
GAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGAAGACTGCCACCAAGGCTG
CTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAGGCC
GAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGCTAA
GAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGTCCT
CCACTACTGCTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACC
AAGAGTGGCCGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCAC
CAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAATGC
CTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTCGAGC
CACGCCTCCTACCGTGATATGATCAAGGATGCTATCCTGAATCTGAAAGA
GCGCAATGGTAGCAGCCGCCAGTCGATCAAGAAATATGTTCAGGCGAACA
ATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCAACAAG
GCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAGGGCCC
CTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTG
CTAAGAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGCCAAG
AAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGACCAC
CAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAGGCTA
ACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCTCCCGCCGTTGTCGAC
AAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGAC
GGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTG
CAAAGGAGACTGCTGCTTAAATGCCTCCCAAGAAGACTTCCACCACCGGC
ACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGATATGATCAA
GGATGCTATCCTGAATCTGAAAGAGCGCAATGGTAGCAGCCGCCAGTCGA
TCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTCCACCAAC
GCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTGAGAAGGG
CGAGTTCCTTCAGCCCAAGGGCCCCTCCGGACCCGTGAAGCTTGCCAAGA
AGGAAGCTGCCCCCAAGCCTGCTGCTAAGAAGACTGCCACCAAGGCTGCT
ACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAGGCCGA
GAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGCTAAGA
AGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGTCCTCC
ACTACTGCTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAA
GAGTGGCCGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCA
AGAAGACCACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAATGCCT
CCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTCGAGCCA
CGCCTCCTACCGTGATATGATCAAGGATGCTATCCTGAATCTGAAAGAGC
GCAATGGTAGCAGCCGCCAGTCGATCAAGAAATATGTTCAGGCGAACAAT
AAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCAACAAGGC
CATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAGGGCCCCT
CCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCT
AAGAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGCCAAGAA
GACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGACCACCA
AGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAGGCTAAC
ACGGCCAAGCCTCGCAAGTCCTCCACTACTGCTCCCGCCGTTGTCGACAA
GCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGG
CTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCA
AAGGAGACTGCTGCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_329208M747DRAFT_329208Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329208-T1M747DRAFT_329208-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329208-T1.utr5p1M747DRAFT_329208-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329208-T1.exon1M747DRAFT_329208-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_329208-T1.exon2M747DRAFT_329208-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_329208-T1.exon3M747DRAFT_329208-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_329208-T1.exon4M747DRAFT_329208-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_329208-T1.exon5M747DRAFT_329208-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_329208-T1.exon6M747DRAFT_329208-T1.exon6Aspergillus niger ATCC 13496exon
M747DRAFT_329208-T1.exon7M747DRAFT_329208-T1.exon7Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329208-T1.cdsM747DRAFT_329208-T1.cdsAspergillus niger ATCC 13496CDS


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR005818
DBxrefInterPro:IPR005819
DBxrefPFAM:PF00538
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:992088..993410 +
Powered by Drupal