You are here

Home

M747DRAFT_329508-T1, M747DRAFT_329508-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_329508-T1
Unique NameM747DRAFT_329508-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851906.1:41662..42729+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_329508-T1 ID=M747DRAFT_329508-T1|Name=M747DRAFT_329508-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1068bp|location=Sequence derived from alignment at KZ851906.1:41662..42729+ (Aspergillus niger ATCC 13496)
AGTCACCATATTTGAGAAATCACTCACCACGCTCATCATGCATACATTCT
CAGGACCAAACCCCATTCCTACCGAGGTCATCATCAACATATTCGGGGAA
CTTGGTCTCCCGGATGCGCTCCACTTGGCCGCGACTTGCCGTCGGCTGCG
CCAGGTCTTGAGTGAACATACGCCTACCATTTACAAACGCCTACGCAGAA
AGATCCCATGTGAGCGCTATGCAAGAGTCCTACTAGCAGATCAAGGAGGC
CTGGCACTTTATTCTTCTTCAGTGACTATTCGGGATCTTTTACGATTGAG
ACGCAACTCTCGTATGGTGGAGAAAGCAATCGAGGTGTTTGATCGTGATA
TTACCCCAAACATTCGGAGTCAGTAGACAGATCAGTAAGCAGTCACATAA
ATAGATATTTGCTAAATTATATATTATACAGTCCCTCTCACGAGCATCGA
TGACGAATTCTACGGAGGAAAACCACGTCCGTTGCATTTACTTCCGTCAG
AACGTCATCGGTTCACTCGAAGCTACTACCAATTTTGGAGTCTTTCACTT
CTCGATCGACCATCTCGACAACAGCGATATCAGAGGATGTTGCTCAAGCA
CCTATACATGGTATATGAAATGGTTGATCTGAACCAGCCAATTGGCGACG
AATTGGTATCTTTCTTTGCTGATGAGAAACGATGCGAACTCTCTCAAGAA
CTGACCGACTATCTCCATTATCTCTACCATGACATTCATGGAGTTGACTA
CATCGATTTCTCGGGGCACAGCATTTCTATGCGTACGCGAGGTCATGCAG
CTATATGGGATCATTGCCAGCCTGATTTCAAGAAAATCGTTTGCTACCAG
TGGCGAGATCCAGAGAAGAAACCTGTCAAGGAGGAAGAGGTGTGGGAGCA
TACAACTGATGAGGAATGAATTCATGTTTCGATTGTTCGGATGGTTGCCA
ATCTAGGAGCTGTTAGAGGTACCTAGGACTTTCAACAATTTAGCCGCACT
TCCTAGCCTAGCTCGTATGTTCCTCAAAGGCTATTACATAGTTAGTCGGG
AATTAGCTCATATCTTCC
back to top

Coding sequence (CDS) from alignment at KZ851906.1:41662..42729+

>M747DRAFT_329508-T1 ID=M747DRAFT_329508-T1|Name=M747DRAFT_329508-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1638bp|location=Sequence derived from alignment at KZ851906.1:41662..42729+ (Aspergillus niger ATCC 13496)
ATGCATACATTCTCAGGACCAAACCCCATTCCTACCGAGGTCATCATCAA
CATATTCGGGGAACTTGGTCTCCCGGATGCGCTCCACTTGGCCGCGACTT
GCCGTCGGCTGCGCCAGGTCTTGAGTGAACATACGCCTACCATTTACAAA
CGCCTACGCAGAAAGATCCCATGTGAGCGCTATGCAAGAGTCCTACTAGC
AGATCAAGGAGGCCTGGCACTTTATTCTTCTTCAGTGACTATTCGGGATC
TTTTACGATTGAGACGCAACTCTCGTATGGTGGAGAAAGCAATCGAGGTG
TTTGATCGTGATATTACCCCAAACATTCGGATCCCTCTCACGAGCATCGA
TGACGAATTCTACGGAGGAAAACCACGTCCGTTGCATTTACTTCCGTCAG
AACGTCATCGGTTCACTCGAAGCTACTACCAATTTTGGAGTCTTTCACTT
CTCGATCGACCATCTCGACAACAGCGATATCAGAGGATGTTGCTCAAGCA
CCTATACATGGTATATGAAATGGTTGATCTGAACCAGCCAATTGGCGACG
AATTGGTATCTTTCTTTGCTGATGAGAAACGATGCGAACTCTCTCAAGAA
CTGACCGACTATCTCCATTATCTCTACCATGACATTCATGGAGTTGACTA
CATCGATTTCTCGGGGCACAGCATTTCTATGCGTACGCGAGGTCATGCAG
CTATATGGGATCATTGCCAGCCTGATTTCAAGAAAATCGTTTGCTACCAG
TGGCGAGATCCAGAGAAGAAACCTGTCAAGGAGGAAGAGGTGTGGGAGCA
TACAACTGATGAGGAATGAATGCATACATTCTCAGGACCAAACCCCATTC
CTACCGAGGTCATCATCAACATATTCGGGGAACTTGGTCTCCCGGATGCG
CTCCACTTGGCCGCGACTTGCCGTCGGCTGCGCCAGGTCTTGAGTGAACA
TACGCCTACCATTTACAAACGCCTACGCAGAAAGATCCCATGTGAGCGCT
ATGCAAGAGTCCTACTAGCAGATCAAGGAGGCCTGGCACTTTATTCTTCT
TCAGTGACTATTCGGGATCTTTTACGATTGAGACGCAACTCTCGTATGGT
GGAGAAAGCAATCGAGGTGTTTGATCGTGATATTACCCCAAACATTCGGA
TCCCTCTCACGAGCATCGATGACGAATTCTACGGAGGAAAACCACGTCCG
TTGCATTTACTTCCGTCAGAACGTCATCGGTTCACTCGAAGCTACTACCA
ATTTTGGAGTCTTTCACTTCTCGATCGACCATCTCGACAACAGCGATATC
AGAGGATGTTGCTCAAGCACCTATACATGGTATATGAAATGGTTGATCTG
AACCAGCCAATTGGCGACGAATTGGTATCTTTCTTTGCTGATGAGAAACG
ATGCGAACTCTCTCAAGAACTGACCGACTATCTCCATTATCTCTACCATG
ACATTCATGGAGTTGACTACATCGATTTCTCGGGGCACAGCATTTCTATG
CGTACGCGAGGTCATGCAGCTATATGGGATCATTGCCAGCCTGATTTCAA
GAAAATCGTTTGCTACCAGTGGCGAGATCCAGAGAAGAAACCTGTCAAGG
AGGAAGAGGTGTGGGAGCATACAACTGATGAGGAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_329508M747DRAFT_329508Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329508-T1.utr5p1M747DRAFT_329508-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329508-T1.exon1M747DRAFT_329508-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_329508-T1.exon2M747DRAFT_329508-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329508-T1.cdsM747DRAFT_329508-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329508-T1.utr3p1M747DRAFT_329508-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329508-T1M747DRAFT_329508-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851906.1supercontigKZ851906.1:41662..42729 +
Powered by Drupal