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M747DRAFT_329964-T1, M747DRAFT_329964-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_329964-T1
Unique NameM747DRAFT_329964-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:772807..774373-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_329964-T1 ID=M747DRAFT_329964-T1|Name=M747DRAFT_329964-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1567bp|location=Sequence derived from alignment at KZ851907.1:772807..774373- (Aspergillus niger ATCC 13496)
ATCACCAGCGCTTTGTTCTTACTCTCGGTCTAGCACACAACAGAACCATT
CAGCCTGAGCTAACATATAATTTGCATCAAGTTATCATTCGCTATGGTTC
AAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACG
GCCGGCGCCCCTCCTGACTATGAACTGCCCTGGTACGTACAGCAGGTCCC
AGCACTAAAGCCAGCTTAGGATGTCGAGTCTGATTGCCAAATTTAAACAA
TAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAACA
CAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGCCG
CACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATCTT
GTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGG
AGCTCAATGCTAGTGATGAAAGAGGTACATCTACCCCACTTGGAGAGGGA
GACGAGAGACGGCTTTAATCTAATATGCTCCAGGTATCGACGTGGTACGG
AACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCG
TCATAAGCTTGTCATCCTTGATGAGGCAGATAGGTACGTACTAGACAGTG
AGCTACATTACCTTTCCTGGATGCTCACGGTGGTATAGTATGACATCAGG
TGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACAC
GGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAG
TCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGT
CAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAG
AGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCT
ATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGA
CAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAA
TGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTG
AATGAATTGTGGTATGTACACAGTGCAGTCTGCCAATTTTATGTTTGTGG
ACTCGTCCTGACCGTATTTCTAGGGAATTGGGGTATTCCTCCCATGATAT
CATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAAC
ATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCGCATT
CTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCT
TTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGAG
ATGAAAAACGAAAGTGTAAGTTAGATGCAGGCATAACTTGGAGTTTTGGG
GCGTTTATAAAGCAAGGCTATACCAAGCCCTGGGGTATTTAGCATATGAT
TTCAACACTTTCTTTGATTTTCAAGTTATTGTTGTTAGAGACTCCAGGTA
TCGTTTATAAGATTCAG
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Coding sequence (CDS) from alignment at KZ851907.1:772807..774373-

>M747DRAFT_329964-T1 ID=M747DRAFT_329964-T1|Name=M747DRAFT_329964-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5295bp|location=Sequence derived from alignment at KZ851907.1:772807..774373- (Aspergillus niger ATCC 13496)
GGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGTTCCGTGTCA
CCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGG
GAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCAGTCACTGCT
GCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGC
AGCTCTTTGAGCCGCCGAAGAATTGATATGACATCAGGTGCCCAGCAAGC
TTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGTTCGCGTTCG
CCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATGCGCT
ATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAA
ACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCG
CCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAACTTG
CAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAG
GGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCT
GCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATTGTGG
TATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCA
CTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGG
GTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGA
AACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACG
TTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGC
TTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCT
CAATGCTAGTGATGAAAGAGATGGTTCAAGCCGAATCCTCAGCCAGTGCC
TCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGA
ACTGCCCTGGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGT
TCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAA
TTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCA
GTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACA
TGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGATATGACATCAGGTGC
CCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGT
TCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCG
CGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAA
GCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGG
GCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATC
AACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAA
CGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGA
TCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAAT
GAATTGTGGTATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGA
AGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAG
GCAGATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGG
AAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACA
TGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCG
ATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGT
TCTGGAGCTCAATGCTAGTGATGAAAGAGATGGTTCAAGCCGAATCCTCA
GCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCC
TGACTATGAACTGCCCTGGGAATTGGGGTATTCCTCCCATGATATCATCA
GTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCG
AAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGA
CGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCA
GGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGATATGAC
ATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGA
CTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCG
ATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCA
AATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATA
ACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGT
CAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAG
TGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCC
AGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAG
ACACTGAATGAATTGTGGTATCGACGTGGTACGGAACCGGATCAAAGGCT
TTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATC
CTTGATGAGGCAGATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGA
TATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGG
ATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAG
ACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAA
GGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGATGGTTCAAGCC
GAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGG
CGCCCCTCCTGACTATGAACTGCCCTGGGAATTGGGGTATTCCTCCCATG
ATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCA
GAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCG
CATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGA
AGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAAT
TGATATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTT
ACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATC
ATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGAC
CGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAG
TGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGA
GATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGG
TTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGA
TCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCG
GCGTTGGAGACACTGAATGAATTGTGGTATCGACGTGGTACGGAACCGGA
TCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAG
CTTGTCATCCTTGATGAGGCAGATAGGGTAGAGAAATATCGCCCGGTATA
TCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCA
TCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGT
ATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGA
CGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGATG
GTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCA
TACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGGAATTGGGGTATT
CCTCCCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCC
ACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTAC
GCACATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCT
GCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCG
CCGAAGAATTGATATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAA
TGGAGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCA
AATAAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGC
TCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATG
CTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGT
GCTGAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTC
GGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCC
CGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAG
GTTGATGCGGCGTTGGAGACACTGAATGAATTGTGGTATCGACGTGGTAC
GGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGT
CGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGGTAGAGAAATATCG
CCCGGTATATCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCT
TGAAGATCATCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGC
ATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCT
ACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATG
AAAGAGATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCT
CAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RFC4M747DRAFT_329964Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329964-T1M747DRAFT_329964-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329964-T1.cdsM747DRAFT_329964-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329964-T1.utr3p1M747DRAFT_329964-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329964-T1.exon5M747DRAFT_329964-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_329964-T1.exon4M747DRAFT_329964-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_329964-T1.exon3M747DRAFT_329964-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_329964-T1.exon2M747DRAFT_329964-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_329964-T1.exon1M747DRAFT_329964-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329964-T1.utr5p1M747DRAFT_329964-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR013748
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08542
DBxrefPFAM:PF13173
DBxrefPFAM:PF00004
Productreplication factor C subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:772807..774373 -
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