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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851910.1:142675..144051- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_330493-T1 ID=M747DRAFT_330493-T1|Name=M747DRAFT_330493-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1377bp|location=Sequence derived from alignment at KZ851910.1:142675..144051- (Aspergillus niger ATCC 13496)
ATTCATTCCTTCTCTCATTTCTCACTCATCTCTGTTCTGTAGATCAGAAC
TGGCCCAGTCTTTCATTTACTCTGTTGATCAGATAACCATCCAACTCGCA
ACTATGCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGC
CGCTCTGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGT
CCACCTGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCT
TGCTCCGACATCGTCCTCAAGGACATCACCGTCCCTGCTGGTGAGACCCT
TAACCTGAAGGACCTCAACGACGGCACCACCGTAAGCGTCCCCTCCCAGC
CCTAGCAGCAGCCCCAATCCTAACAAGCATTCCAGGTCACCTTCGAGGGA
ACCACCACCTGGGAGTACGAGGAGTGGGATGGACCCCTTCTCCGTATCTC
CGGTAAGGACATCACCGTGACCCAGTCCTCCGACGCCGTCCTCGACGGCA
ACGGCGCCAAGTGGTGGGACGGTGAGGGAACCAACGGCGGCAAGACCAAG
CCCAAGTTCTTCTACGCCCACGACCTCGACGACTCCAAGATCTCCGGTCT
TTACATCAAGAACACCCCCGTCCAGGCCATCTCCGTCGAGTCGGACAACC
TCGTGATCGAGGACGTCACCATCGACAACAGCGACGGTGACTCCGAGGGC
GGTCACAACACCGACGGTTTCGACATCAGCGAGAGTACCTACATCACCAT
CACCGGCGCCACCGTCAAGAACCAGGACGACTGCGTCGCCATCAACTCTG
GTGAGAACATCTACTTCTCCGGCGGTACCTGCTCCGGCGGTCACGGTCTC
TCCATCGGCTCCGTCGGTGGCCGCGACGACAACACCGTCAAGAACGTCAC
TTTCATCGACTCGACTGTCTCCGACTCTGAGAACGGTGTTCGCATCAAGA
CCGTCTACGACGCTACTGGTACTGTCGAGGACATCACCTACTCCAACATC
CAGCTCTCCGGTATTTCCGACTACGGTATCGTCATCGAGCAGGACTACGA
GAATGGTGACCCCACTGGTACTCCCTCCAACGGTGTTACCATCTCCGACG
TCACCCTCGAGGACATCACTGGCTCGGTTGACTCCGACGCTGTCGAGATC
TACATCCTTTGCGGTGATGGCAGCTGCTCTGACTGGACCATGTCTGGCAT
TGACATCACCGGCGGTGAGACCAGCAGCGATTGCGAGAACGTTCCTTCTG
GTGCTTCTTGCGATCAGTAAGGGGCTTGCGTGCCTTTCCCTTCTCTTGAC
CGAAAGAAAGACTGAAGAGCTGTGGTGCGCTCTGTACATTTCAGATAATT
GCTAATCTTCTTTCTCTTCTTTGCCGC back to topCoding sequence (CDS) from alignment at KZ851910.1:142675..144051- >M747DRAFT_330493-T1 ID=M747DRAFT_330493-T1|Name=M747DRAFT_330493-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2226bp|location=Sequence derived from alignment at KZ851910.1:142675..144051- (Aspergillus niger ATCC 13496)
GTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGGAGTGGGATGGACC
CCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACCCAGTCCTCCGACG
CCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGGTGAGGGAACCAAC
GGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACGACCTCGACGACTC
CAAGATCTCCGGTCTTTACATCAAGAACACCCCCGTCCAGGCCATCTCCG
TCGAGTCGGACAACCTCGTGATCGAGGACGTCACCATCGACAACAGCGAC
GGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCGACATCAGCGAGAG
TACCTACATCACCATCACCGGCGCCACCGTCAAGAACCAGGACGACTGCG
TCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGGCGGTACCTGCTCC
GGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCCGCGACGACAACAC
CGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCCGACTCTGAGAACG
GTGTTCGCATCAAGACCGTCTACGACGCTACTGGTACTGTCGAGGACATC
ACCTACTCCAACATCCAGCTCTCCGGTATTTCCGACTACGGTATCGTCAT
CGAGCAGGACTACGAGAATGGTGACCCCACTGGTACTCCCTCCAACGGTG
TTACCATCTCCGACGTCACCCTCGAGGACATCACTGGCTCGGTTGACTCC
GACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCAGCTGCTCTGACTG
GACCATGTCTGGCATTGACATCACCGGCGGTGAGACCAGCAGCGATTGCG
AGAACGTTCCTTCTGGTGCTTCTTGCGATCAGTAAATGCCTTCTGCCAAG
CCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTCTGGCTGCTCCTGC
GCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACCTGCACCTTCACTG
ATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTCCGACATCGTCCTC
AAGGACATCACCGTCCCTGCTGGTGAGACCCTTAACCTGAAGGACCTCAA
CGACGGCACCACCGTCACCTTCGAGGGAACCACCACCTGGGAGTACGAGG
AGTGGGATGGACCCCTTCTCCGTATCTCCGGTAAGGACATCACCGTGACC
CAGTCCTCCGACGCCGTCCTCGACGGCAACGGCGCCAAGTGGTGGGACGG
TGAGGGAACCAACGGCGGCAAGACCAAGCCCAAGTTCTTCTACGCCCACG
ACCTCGACGACTCCAAGATCTCCGGTCTTTACATCAAGAACACCCCCGTC
CAGGCCATCTCCGTCGAGTCGGACAACCTCGTGATCGAGGACGTCACCAT
CGACAACAGCGACGGTGACTCCGAGGGCGGTCACAACACCGACGGTTTCG
ACATCAGCGAGAGTACCTACATCACCATCACCGGCGCCACCGTCAAGAAC
CAGGACGACTGCGTCGCCATCAACTCTGGTGAGAACATCTACTTCTCCGG
CGGTACCTGCTCCGGCGGTCACGGTCTCTCCATCGGCTCCGTCGGTGGCC
GCGACGACAACACCGTCAAGAACGTCACTTTCATCGACTCGACTGTCTCC
GACTCTGAGAACGGTGTTCGCATCAAGACCGTCTACGACGCTACTGGTAC
TGTCGAGGACATCACCTACTCCAACATCCAGCTCTCCGGTATTTCCGACT
ACGGTATCGTCATCGAGCAGGACTACGAGAATGGTGACCCCACTGGTACT
CCCTCCAACGGTGTTACCATCTCCGACGTCACCCTCGAGGACATCACTGG
CTCGGTTGACTCCGACGCTGTCGAGATCTACATCCTTTGCGGTGATGGCA
GCTGCTCTGACTGGACCATGTCTGGCATTGACATCACCGGCGGTGAGACC
AGCAGCGATTGCGAGAACGTTCCTTCTGGTGCTTCTTGCGATCAGTAAAT
GCCTTCTGCCAAGCCTTTGTTCTGCCTTGCGACCCTGGCCGGTGCCGCTC
TGGCTGCTCCTGCGCCTTCCCGCGTCTCCGACTTCACCAAGCGGTCCACC
TGCACCTTCACTGATGCGGCCACCGCCTCCGAGAGCAAGACCTCTTGCTC
CGACATCGTCCTCAAGGACATCACCGTCCCTGCTGGTGAGACCCTTAACC
TGAAGGACCTCAACGACGGCACCACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | endo-polygalacturonase A pgaA |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851910.1 | supercontig | KZ851910.1:142675..144051 - |
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