You are here

Home

M747DRAFT_330560-T1, M747DRAFT_330560-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_330560-T1
Unique NameM747DRAFT_330560-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:470576..471882-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_330560-T1 ID=M747DRAFT_330560-T1|Name=M747DRAFT_330560-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1307bp|location=Sequence derived from alignment at KZ851910.1:470576..471882- (Aspergillus niger ATCC 13496)
CCGACCACAAACCACGATAGTATAGCAACACCCCCAAAATGACCGACCTC
ACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCCCTCTTCGAAACT
CTCCACAGGCTACATGACCACCGAAATCGCCGACGAATTCCTCAAAGAAG
CCTACCGAATTGTACTTCCCACCATCATTACCCTCCACCCTCACTCAGAT
ACTAACAACCATCCCAATTAAATTAAACAGAATAACCATATAACATCCTT
ACTATCCTACCTCCACACAATCCGCCCCTCCTACCTCTCCCTCACCACAA
AACCCACCACCAAACAACAACACCAACACCAACAACCAGAGATCCTAGAC
GACACCGCCCGCGACACCATCACCACCACCACCTCGACCCTCCTATCCAA
CCTCTCCACCTCAATCACGACCCTCAGCGCAGCGGAGAATCTCCGCCAGG
AAACCGTCTCTAGAAGCATAACGCAGCGGTTCGGGAAGGGGTTGTTGGCG
AAGTGGGCGGGGGGCGCGACACTGTCCTCTGGGAATAATGATAATAATGA
GGGAAAGGAGGAAGAACAGGTCGTGGAAGAAGAGAAGGAGAAGGTGTTGA
AGGGGGTGAGGGAGAGTGTGCTCTTCTATCTGAGGATTAAGTTGGGAGGG
GTGGTTAATGAGCAGAGGGATATGGTTGAGAAGAGGATTGAGAGGGTTAG
GGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTGGTAAGGGTGGAT
GGGGGAGTGTGGATGGGGGAGAGTGGAGGGGTGATGTTGCTGGAGGTGGT
ACTACTACGGGAAGTGTGATGATGGATGAGAGTGAAGTCAAGGAGATCGA
GAAGCAGCTGACCCCTCAGCAATTGCAGCTCTTTGAGGAGGAGAATGATT
CCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAGTAAGTTGAT
CTATCCCTCCCGTCCCTATTGTTTATTCCTTGTTTTGTCTTGTGTTACCG
GTGGGGAGATTGGCTAATGAGTATGGTTGTTGGTTATGTGCAGGAACGCG
GAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCTCGTGTCGCA
TTTGTCTACACAGGAGGAATACATTTCGCAGCTTGTGACGGATGCGAGCA
ATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAGCGCGCGACG
GAGAGACGCAGTACGGCGCAGGCGGTGTTTTGGGGGACTGTGGGGTTGTG
TACGTGGTTGGTTGTTTGGGATTTGGTTTTTTAGGTAGTAGTAGTTTATT
ACTATCT
back to top

Coding sequence (CDS) from alignment at KZ851910.1:470576..471882-

>M747DRAFT_330560-T1 ID=M747DRAFT_330560-T1|Name=M747DRAFT_330560-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3222bp|location=Sequence derived from alignment at KZ851910.1:470576..471882- (Aspergillus niger ATCC 13496)
GAACGCGGAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCTCG
TGTCGCATTTGTCTACACAGGAGGAATACATTTCGCAGCTTGTGACGGAT
GCGAGCAATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAGCG
CGCGACGGAGAGACGCAGTACGGCGCAGGCGGTGTTTTGGGGGACTGTGG
GGTTGTGTACGTGGTTGGTTGTTTGGGATTTGGTTTTTTAGAATAACCAT
ATAACATCCTTACTATCCTACCTCCACACAATCCGCCCCTCCTACCTCTC
CCTCACCACAAAACCCACCACCAAACAACAACACCAACACCAACAACCAG
AGATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCGACC
CTCCTATCCAACCTCTCCACCTCAATCACGACCCTCAGCGCAGCGGAGAA
TCTCCGCCAGGAAACCGTCTCTAGAAGCATAACGCAGCGGTTCGGGAAGG
GGTTGTTGGCGAAGTGGGCGGGGGGCGCGACACTGTCCTCTGGGAATAAT
GATAATAATGAGGGAAAGGAGGAAGAACAGGTCGTGGAAGAAGAGAAGGA
GAAGGTGTTGAAGGGGGTGAGGGAGAGTGTGCTCTTCTATCTGAGGATTA
AGTTGGGAGGGGTGGTTAATGAGCAGAGGGATATGGTTGAGAAGAGGATT
GAGAGGGTTAGGGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTGG
TAAGGGTGGATGGGGGAGTGTGGATGGGGGAGAGTGGAGGGGTGATGTTG
CTGGAGGTGGTACTACTACGGGAAGTGTGATGATGGATGAGAGTGAAGTC
AAGGAGATCGAGAAGCAGCTGACCCCTCAGCAATTGCAGCTCTTTGAGGA
GGAGAATGATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTC
AATGACCGACCTCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCC
CCTCTTCGAAACTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAA
TTCCTCAAAGAAGCCTACCGAATTGAACGCGGAGAAATCTCTCCTTGAGA
TATCCTCCCTCCAGCAGACGCTCGTGTCGCATTTGTCTACACAGGAGGAA
TACATTTCGCAGCTTGTGACGGATGCGAGCAATACGGAAGCGAATATCGG
GCAGGGAAATAAGGAGTTGAAGCGCGCGACGGAGAGACGCAGTACGGCGC
AGGCGGTGTTTTGGGGGACTGTGGGGTTGTGTACGTGGTTGGTTGTTTGG
GATTTGGTTTTTTAGAATAACCATATAACATCCTTACTATCCTACCTCCA
CACAATCCGCCCCTCCTACCTCTCCCTCACCACAAAACCCACCACCAAAC
AACAACACCAACACCAACAACCAGAGATCCTAGACGACACCGCCCGCGAC
ACCATCACCACCACCACCTCGACCCTCCTATCCAACCTCTCCACCTCAAT
CACGACCCTCAGCGCAGCGGAGAATCTCCGCCAGGAAACCGTCTCTAGAA
GCATAACGCAGCGGTTCGGGAAGGGGTTGTTGGCGAAGTGGGCGGGGGGC
GCGACACTGTCCTCTGGGAATAATGATAATAATGAGGGAAAGGAGGAAGA
ACAGGTCGTGGAAGAAGAGAAGGAGAAGGTGTTGAAGGGGGTGAGGGAGA
GTGTGCTCTTCTATCTGAGGATTAAGTTGGGAGGGGTGGTTAATGAGCAG
AGGGATATGGTTGAGAAGAGGATTGAGAGGGTTAGGGAGAGGGAGAGGAG
TGTTTTGTATAAATCAAGTGGTGGTAAGGGTGGATGGGGGAGTGTGGATG
GGGGAGAGTGGAGGGGTGATGTTGCTGGAGGTGGTACTACTACGGGAAGT
GTGATGATGGATGAGAGTGAAGTCAAGGAGATCGAGAAGCAGCTGACCCC
TCAGCAATTGCAGCTCTTTGAGGAGGAGAATGATTCCATGGTCAAGTATT
TTGAGGATGTGGTGGGGAAGGTTCAATGACCGACCTCACCCCAACATTCT
CCGAGCTGCTGCGCAGCAAATCCCCCTCTTCGAAACTCTCCACAGGCTAC
ATGACCACCGAAATCGCCGACGAATTCCTCAAAGAAGCCTACCGAATTGA
ACGCGGAGAAATCTCTCCTTGAGATATCCTCCCTCCAGCAGACGCTCGTG
TCGCATTTGTCTACACAGGAGGAATACATTTCGCAGCTTGTGACGGATGC
GAGCAATACGGAAGCGAATATCGGGCAGGGAAATAAGGAGTTGAAGCGCG
CGACGGAGAGACGCAGTACGGCGCAGGCGGTGTTTTGGGGGACTGTGGGG
TTGTGTACGTGGTTGGTTGTTTGGGATTTGGTTTTTTAGAATAACCATAT
AACATCCTTACTATCCTACCTCCACACAATCCGCCCCTCCTACCTCTCCC
TCACCACAAAACCCACCACCAAACAACAACACCAACACCAACAACCAGAG
ATCCTAGACGACACCGCCCGCGACACCATCACCACCACCACCTCGACCCT
CCTATCCAACCTCTCCACCTCAATCACGACCCTCAGCGCAGCGGAGAATC
TCCGCCAGGAAACCGTCTCTAGAAGCATAACGCAGCGGTTCGGGAAGGGG
TTGTTGGCGAAGTGGGCGGGGGGCGCGACACTGTCCTCTGGGAATAATGA
TAATAATGAGGGAAAGGAGGAAGAACAGGTCGTGGAAGAAGAGAAGGAGA
AGGTGTTGAAGGGGGTGAGGGAGAGTGTGCTCTTCTATCTGAGGATTAAG
TTGGGAGGGGTGGTTAATGAGCAGAGGGATATGGTTGAGAAGAGGATTGA
GAGGGTTAGGGAGAGGGAGAGGAGTGTTTTGTATAAATCAAGTGGTGGTA
AGGGTGGATGGGGGAGTGTGGATGGGGGAGAGTGGAGGGGTGATGTTGCT
GGAGGTGGTACTACTACGGGAAGTGTGATGATGGATGAGAGTGAAGTCAA
GGAGATCGAGAAGCAGCTGACCCCTCAGCAATTGCAGCTCTTTGAGGAGG
AGAATGATTCCATGGTCAAGTATTTTGAGGATGTGGTGGGGAAGGTTCAA
TGACCGACCTCACCCCAACATTCTCCGAGCTGCTGCGCAGCAAATCCCCC
TCTTCGAAACTCTCCACAGGCTACATGACCACCGAAATCGCCGACGAATT
CCTCAAAGAAGCCTACCGAATT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_330560M747DRAFT_330560Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330560-T1M747DRAFT_330560-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330560-T1.cdsM747DRAFT_330560-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330560-T1.utr3p1M747DRAFT_330560-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330560-T1.exon3M747DRAFT_330560-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_330560-T1.exon2M747DRAFT_330560-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_330560-T1.exon1M747DRAFT_330560-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330560-T1.utr5p1M747DRAFT_330560-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000727
DBxrefInterPro:IPR019529
DBxrefPFAM:PF10496
Productsnare protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:470576..471882 -
Powered by Drupal