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M747DRAFT_330611-T1, M747DRAFT_330611-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_330611-T1
Unique NameM747DRAFT_330611-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:649657..650695+

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_330611-T1 ID=M747DRAFT_330611-T1|Name=M747DRAFT_330611-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1039bp|location=Sequence derived from alignment at KZ851910.1:649657..650695+ (Aspergillus niger ATCC 13496)
AATGGGTCGCGTCCGTACCAAGGTGAGCATACACGACCGCAATAATGGAG
GAAAGAAAGAATATCAATTCTAACGAAAATGCGCGCCACAATAGACAGTC
AAGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCT
CGACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCT
CCAAGCGTCTCCGCAACAAGGTTAGTGATTACCCTCTTTTTTCTCCCGGA
AATCCGGATATAATGGTCAAATGGCAATGTGCTAATATGCAATTGGATTT
AGATCGCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCT
GTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGA
TCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCG
GCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGC
GTAAGTTCTCCCTTATGGAATCTACATTCATGATTTATATCATGTCTAAC
TCAATCGTGCTTTAGTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTC
CCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGATCATTGCGC
CGTTGAACGGAAAATGAAAAAGTTCTGATTGTCTTCGGTCGATCCATGGC
GTTCCCCATGCTTGTTCTGGTTGGCTCACCCGCTATCGATTTAGCTTAGA
GACAGCTCGGATGAGAAATGAACACGAATTCTGTCAAACAAGGTGTCGCT
GATTCCCCTGATGGGGATGATGCTTGATTGCCAATTTTATTCCCTCCTCG
TCTGGTCTTACGACCGGATTCTCGTAGGAGATTCTACGGGGACGGCTGTC
TGTTGGTGACATGCCGGACTACGGAGAGTCGATCGTAGACTTGACAGTGG
TAAGCCATTGATTTGGTTCTTATCTGACATGCTATCTTATCGGGGTATCA
ACCTTTGTTCAAAACGCCTCATAATGCCATGCGCGAAAG
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Coding sequence (CDS) from alignment at KZ851910.1:649657..650695+

>M747DRAFT_330611-T1 ID=M747DRAFT_330611-T1|Name=M747DRAFT_330611-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1684bp|location=Sequence derived from alignment at KZ851910.1:649657..650695+ (Aspergillus niger ATCC 13496)
AATGGGTCGCGTCCGTACCAAGACAGTCAAGCGTTCCGCTAAGGTCGTTA
TCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCGT
ATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGAT
CGCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCC
GCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAG
TACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCA
GCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCTTCG
ACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCAGGAG
CGCCCCCGCCGCTACCGGTAGAATGGGTCGCGTCCGTACCAAGACAGTCA
AGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTC
GACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTC
CAAGCGTCTCCGCAACAAGATCGCTGGTTACACCACCCACCTTATGAAGC
GTATCCAGCGTGGCCCTGTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAG
GAGCGTGAGCGCAAGGATCAGTACGTTCCTGAGGTCTCCGCTCTGGATGT
TTCCCAGACCGAGTCCGGCCAGCTCGACGTCGACTCTGAGACCAAGGACC
TGCTCAAGAGCATGGGCTTCGACAACCTCAAGGTCAACGTCATCCCCGTC
TCCCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGAATGGGTC
GCGTCCGTACCAAGACAGTCAAGCGTTCCGCTAAGGTCGTTATCGAGCGT
TACTACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCGTATCTGCGA
TGAGATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGATCGCTGGTT
ACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTATC
TCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTACGTTCC
TGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCTCGACG
TCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCTTCGACAACCTC
AAGGTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCAGGAGCGCCCCCG
CCGCTACCGGTAGAATGGGTCGCGTCCGTACCAAGACAGTCAAGCGTTCC
GCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGA
GACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTC
TCCGCAACAAGATCGCTGGTTACACCACCCACCTTATGAAGCGTATCCAG
CGTGGCCCTGTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGA
GCGCAAGGATCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGA
CCGAGTCCGGCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAG
AGCATGGGCTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCA
GCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS17M747DRAFT_330611Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330611-T1M747DRAFT_330611-T1-proteinAspergillus niger ATCC 13496polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330611-T1.exon1M747DRAFT_330611-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_330611-T1.exon2M747DRAFT_330611-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_330611-T1.exon3M747DRAFT_330611-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_330611-T1.exon4M747DRAFT_330611-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330611-T1.cdsM747DRAFT_330611-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330611-T1.utr3p1M747DRAFT_330611-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018273
DBxrefInterPro:IPR036401
DBxrefInterPro:IPR001210
DBxrefPFAM:PF00833
Product40S ribosomal protein S17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:649657..650695 +
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