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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851912.1:295832..297976+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_330978-T1 ID=M747DRAFT_330978-T1|Name=M747DRAFT_330978-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2145bp|location=Sequence derived from alignment at KZ851912.1:295832..297976+ (Aspergillus niger ATCC 13496)
TCTTGCTCCTCGATCATTCTCATTGCTGCATTGCTATATTGCTGTTGATT
TCATCGAAATATCAAATACATTTCGTCTCGTTACACTTGGAAATCGCTCA
GCCCGGAAACCCCCTCAGGTGCCTCCGCCATGGCCGCCGCCGATGTTCGC
GACATGCTGGATCTGCCCGCGGAGGGCCAGCCCCGACCTCATAAGAAACA
GAAGGTCGTCGAGAAGCGTCCAGGTGGGCTTCTCTTAGTTCCCTTACTCA
CCTAAAATTAAATCTGACACATTCCCATCGCTAGAGGGTATCACCCGTGA
GCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCCATCAACGAGA
ACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACAGCCA
TGGTACGCACACATCACCATATCAACTGCTCTCCGATATCAAACACTGAC
TCCATCAGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCT
CGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGC
TGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCC
TCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAA
CATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCC
ATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGAC
CTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCTACGA
CTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCG
TCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTAC
TTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGATGTC
GGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACC
GTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCC
GACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCAC
CGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCC
TTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAGCCAA
GGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAA
ACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCCGCCG
GCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCC
GACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGC
CGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAAC
AAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAG
CACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCA
GAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCTGCTG
CGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGT
GTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGA
GGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGG
CTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAAGGAT
AGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGC
GGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGG
GGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGGTGGT
GCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGT
TCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAAAAGA
GGATTGATGTTATGGGCGTTGGAGAATGGGCGGCGTTCTTGGTGTTTAGA
TATACCTATGTACGACTACATGAAGCTTTGGCCTTGATAATCACT back to topCoding sequence (CDS) from alignment at KZ851912.1:295832..297976+ >M747DRAFT_330978-T1 ID=M747DRAFT_330978-T1|Name=M747DRAFT_330978-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5400bp|location=Sequence derived from alignment at KZ851912.1:295832..297976+ (Aspergillus niger ATCC 13496)
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGAGGGTA
TCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCC
ATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCG
CGTACAGCCATGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATG
GCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCC
GCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGA
TGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAAT
ACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAAT
CGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCAT
GGACCTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCT
ACGACTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCC
CTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTA
CTACTTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGA
TGTCGGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCC
GACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCAC
AGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCA
TCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCC
CGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAG
CCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCA
AGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCC
GCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCG
CGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGG
CCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAA
CAACAAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGT
GCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCG
CGCAGAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCT
GCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGA
GCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGC
TGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTG
GAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAA
GGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTC
CTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCG
GAGGGGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGG
TGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTA
GTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAA
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGAGGGTA
TCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCC
ATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCG
CGTACAGCCATGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATG
GCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCC
GCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGA
TGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAAT
ACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAAT
CGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCAT
GGACCTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCT
ACGACTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCC
CTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTA
CTACTTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGA
TGTCGGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCC
GACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCAC
AGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCA
TCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCC
CGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAG
CCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCA
AGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCC
GCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCG
CGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGG
CCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAA
CAACAAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGT
GCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCG
CGCAGAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCT
GCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGA
GCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGC
TGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTG
GAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAA
GGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTC
CTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCG
GAGGGGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGG
TGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTA
GTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAA
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGAGGGTA
TCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCC
ATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCG
CGTACAGCCATGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATG
GCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCC
GCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGA
TGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAAT
ACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAAT
CGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCAT
GGACCTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCT
ACGACTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCC
CTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTA
CTACTTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGA
TGTCGGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCC
GACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCAC
AGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCA
TCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCC
CGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAG
CCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCA
AGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCC
GCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCG
CGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGG
CCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAA
CAACAAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGT
GCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCG
CGCAGAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCT
GCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGA
GCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGC
TGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTG
GAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAA
GGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTC
CTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCG
GAGGGGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGG
TGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTA
GTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045892 | negative regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262OLP |
| DBxref | InterPro:IPR017877 |
| DBxref | InterPro:IPR032563 |
| DBxref | InterPro:IPR008468 |
| DBxref | PFAM:PF16282 |
| DBxref | PFAM:PF05499 |
| Product | swr complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851912.1 | supercontig | KZ851912.1:295832..297976 + |
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