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M747DRAFT_331359-T1, M747DRAFT_331359-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_331359-T1
Unique NameM747DRAFT_331359-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:219869..221299+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_331359-T1 ID=M747DRAFT_331359-T1|Name=M747DRAFT_331359-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1431bp|location=Sequence derived from alignment at KZ851914.1:219869..221299+ (Aspergillus niger ATCC 13496)
GAATTGACCTTTGTATCTCTTTCTCATCCACCTTACTTTCCCACAGCTTG TTGGGATATTTATAACCCCCTCTATCCCTGCTTGTTCACCATCAACCCCT GTCCACAACTAACTCACTTCAACTCATTCACATTTGCTCTCACGGCCAGA TTTGCATAGTAAGCAAACGTCTCCCCCCACCCAGGTACCCCTCATATCTT TAACGTCGTTGCTGGCCCTGTGACCCAACAACAACAACTCACCGCAGTGC TAAGAGCTGACATCTTCAATCAAAGAACTCGGATCTTCTAGACATCCCTA ATACACCTCCACAAAATGGCTGACACACCTGCACCTCACTCCGGTCCCAT GTTGACCTTCATCAGTGGCGACGGCGTGCACATTGAGTGTGGTAAGTGCA CGCGTTTCAATAAGCTCAGCAGACGCGCTCAGTGTCTGTGTCACGATGAG ACCATATATGCTAACATGTGTGTGAAAATACAGAACGCGATGTTGCCGAG CGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCGCCAACGA GGAGATCCCGATCCCTAATGTGAGTTATCCGTTCGAAGTAAAATGGCCAT TGGTGACCATAGCTAACCACACCCGCAACACAGGTCAACGAAGCTGTCTT GAAGAAGGTCATCGAATGGTGCAGACATCACAAGAACGACCCCCCCAGCA CTGGCGAGGAGGATGACTCCCGCCGCAAGACCACCGACATCGACGAGTGG GATCAGAAATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCT GGTACGCGTTACGAACTATGATCTACAAAAGCCCCTCAGCTAACTTGGCG CTTAACTTGATAGGCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACG TCGGATGCAAAACCGTTGCGAACATGATCAAGGGCAAGTCTCCGGAAGAG ATCCGCAAGACCTTCAACATCCAGAACGATTTCACCCCCGAGGAGGAGGA TCAGATCCGCCGTGAGAACGAGTGGGCCGAGGAGTAAGTTCCTTACAAAC CCATCCCCCGCTATCTTACCACCTGATCGTATGCTAACATTGTACTTGCT ATAGTCGCTAAATCTGCGTTAAGTTACGGCATCAGTATGCTAGCTTCTAC GGCTTGTTGATTGGAAGCAAGCCGAGGAAGATTAGCTATCATGATGTTTT AATTCGGGTCTCATTAGGTCTCAGGTTGCAGTCCATGGAGTTATTAGTCT TTTTCTTTACTCTCTCAATTTTTTAACGTCAGCGATTTGCTTTCTCAGTC TCTCTTTTCCCTTTGGCCCTAGCCGTGCGTTCATTATGAGCAGGGGGTAG ATGTAGCTGTAAAGTAGTTCAAGGTTAGCTAATCCTGTTAACGCCATTGC ACATATCGTTGTCAAAAAATACTGTTCCACG
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Coding sequence (CDS) from alignment at KZ851914.1:219869..221299+

>M747DRAFT_331359-T1 ID=M747DRAFT_331359-T1|Name=M747DRAFT_331359-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2535bp|location=Sequence derived from alignment at KZ851914.1:219869..221299+ (Aspergillus niger ATCC 13496)
ATGGCTGACACACCTGCACCTCACTCCGGTCCCATGTTGACCTTCATCAG
TGGCGACGGCGTGCACATTGAGTGTGAACGCGATGTTGCCGAGCGCTCCC
TTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCGCCAACGAGGAGATC
CCGATCCCTAATGTCAACGAAGCTGTCTTGAAGAAGGTCATCGAATGGTG
CAGACATCACAAGAACGACCCCCCCAGCACTGGCGAGGAGGATGACTCCC
GCCGCAAGACCACCGACATCGACGAGTGGGATCAGAAATTTACCCAGGTC
GATCAAGAAATGTTGTTCGAGATCATTCTGGCCGCAAACTACCTCGACAT
TAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAACATGATCAAGG
GCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACGATTTC
ACCCCCGAGGAGGAGGATCAGATCCGCCGTGAGAACGAGTGGGCCGAGGA
TCGCTAAATGGCTGACACACCTGCACCTCACTCCGGTCCCATGTTGACCT
TCATCAGTGGCGACGGCGTGCACATTGAGTGTGAACGCGATGTTGCCGAG
CGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCGCCAACGA
GGAGATCCCGATCCCTAATGTCAACGAAGCTGTCTTGAAGAAGGTCATCG
AATGGTGCAGACATCACAAGAACGACCCCCCCAGCACTGGCGAGGAGGAT
GACTCCCGCCGCAAGACCACCGACATCGACGAGTGGGATCAGAAATTTAC
CCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCTGGCCGCAAACTACC
TCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAACATG
ATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAA
CGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCGTGAGAACGAGTGGG
CCGAGGATCGCTAAATGGCTGACACACCTGCACCTCACTCCGGTCCCATG
TTGACCTTCATCAGTGGCGACGGCGTGCACATTGAGTGTGAACGCGATGT
TGCCGAGCGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCG
CCAACGAGGAGATCCCGATCCCTAATGTCAACGAAGCTGTCTTGAAGAAG
GTCATCGAATGGTGCAGACATCACAAGAACGACCCCCCCAGCACTGGCGA
GGAGGATGACTCCCGCCGCAAGACCACCGACATCGACGAGTGGGATCAGA
AATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCTGGCCGCA
AACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGC
GAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACA
TCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCGTGAGAAC
GAGTGGGCCGAGGATCGCTAAATGGCTGACACACCTGCACCTCACTCCGG
TCCCATGTTGACCTTCATCAGTGGCGACGGCGTGCACATTGAGTGTGAAC
GCGATGTTGCCGAGCGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTG
GGTGGCGCCAACGAGGAGATCCCGATCCCTAATGTCAACGAAGCTGTCTT
GAAGAAGGTCATCGAATGGTGCAGACATCACAAGAACGACCCCCCCAGCA
CTGGCGAGGAGGATGACTCCCGCCGCAAGACCACCGACATCGACGAGTGG
GATCAGAAATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCT
GGCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAA
CCGTTGCGAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACC
TTCAACATCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCG
TGAGAACGAGTGGGCCGAGGATCGCTAAATGGCTGACACACCTGCACCTC
ACTCCGGTCCCATGTTGACCTTCATCAGTGGCGACGGCGTGCACATTGAG
TGTGAACGCGATGTTGCCGAGCGCTCCCTTCTCATCAAGAACATGCTGGA
AGATCTGGGTGGCGCCAACGAGGAGATCCCGATCCCTAATGTCAACGAAG
CTGTCTTGAAGAAGGTCATCGAATGGTGCAGACATCACAAGAACGACCCC
CCCAGCACTGGCGAGGAGGATGACTCCCGCCGCAAGACCACCGACATCGA
CGAGTGGGATCAGAAATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGA
TCATTCTGGCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGA
TGCAAAACCGTTGCGAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCG
CAAGACCTTCAACATCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGA
TCCGCCGTGAGAACGAGTGGGCCGAGGATCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_331359M747DRAFT_331359Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331359-T1M747DRAFT_331359-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331359-T1.utr5p1M747DRAFT_331359-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_331359-T1.utr5p2M747DRAFT_331359-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331359-T1.exon1M747DRAFT_331359-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_331359-T1.exon2M747DRAFT_331359-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_331359-T1.exon3M747DRAFT_331359-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_331359-T1.exon4M747DRAFT_331359-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_331359-T1.exon5M747DRAFT_331359-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_331359-T1.exon6M747DRAFT_331359-T1.exon6Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331359-T1.cdsM747DRAFT_331359-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331359-T1.utr3p1M747DRAFT_331359-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264ZWF
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR036296
DBxrefInterPro:IPR016073
DBxrefInterPro:IPR016072
DBxrefInterPro:IPR016897
DBxrefInterPro:IPR001232
DBxrefPFAM:PF03931
DBxrefPFAM:PF01466
Product Skp subunit
ProductE3 ubiquitin ligase SCF complex
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:219869..221299 +