|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851919.1:436060..437326+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_332295-T1 ID=M747DRAFT_332295-T1|Name=M747DRAFT_332295-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1267bp|location=Sequence derived from alignment at KZ851919.1:436060..437326+ (Aspergillus niger ATCC 13496)
CTTCCCACTCTTCTTCCTTTCCCCCAACCCCCGTTGGGCTCTGTCAACAG
CCTGCGGTTTAGCAGCCGCAAGAGCGTCCTCTGCCACCATGGCGCCTCGA
GTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAGTCTTCTCACCCT
CTCCTTGCTGTATAATATCGCCCGATGGCGGCAACTTGACACCACGCCCG
GCGCACCTGCCATCACCCCGATCATACCCTATTTGACGCTCGTTCCTTCA
CAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGACACTTGTGGAGCA
AAACATCTTCACCGTGCTTTTGAACGCGGCCACTCTCTTTTATGGCGGGA
AATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCGAAGTTCATCCTC
GCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCTTTATATTCTAGG
AGCTGCCCTTAAAAGTGGCTCCAGCAGCGGGTACGCCTTGTTTTCTCATG
ACGAATGCACAACATCTTGCGCTTTCCTTACTGACTCACCGACTTCAAGC
CTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGTCGC
CTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCTTCAAAGGCTTGG
TCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTGTTCCTGAACACC
ATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTGGCT
CGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCAAACGTCAGCCTG
ACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAGGGTGATGCCAGC
GAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCCAAT
CGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTGCCATCAGGATCT
GTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAACCAGCAGGTTCTG
GCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAACGG
ACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAGCAC
TCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCGGGAAGAGTGCAG
CCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGACTCC
GACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCTACA
CCCCCGACCATGCGTGA back to topCoding sequence (CDS) from alignment at KZ851919.1:436060..437326+ >M747DRAFT_332295-T1 ID=M747DRAFT_332295-T1|Name=M747DRAFT_332295-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1179bp|location=Sequence derived from alignment at KZ851919.1:436060..437326+ (Aspergillus niger ATCC 13496)
ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAG
TCTTCTCACCCTCTCCTTGCTGTATAATATCGCCCGATGGCGGCAACTTG
ACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG
CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGAC
ACTTGTGGAGCAAAACATCTTCACCGTGCTTTTGAACGCGGCCACTCTCT
TTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG
AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCT
TTATATTCTAGGAGCTGCCCTTAAAAGTGGCTCCAGCAGCGGGTACGCCT
TGTTTTCTCATGACGAATGCACAACATCTTGCGCTTTCCTTACTGACTCA
CCGACTTCAAGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATC
CTTCTTGGTCGCCTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCT
TCAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTG
TTCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGAT
TCTTGCGTGGCTCGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCA
AACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAG
GGTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCT
TCAGCCGCCAATCGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTG
CCATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAAC
CAGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAA
CCATCGCAACGGACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGAC
GTGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCG
GGAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCA
TGCTCAGACTCCGACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAG
AAACAAGCTACACCCCCGACCATGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013861 |
| DBxref | InterPro:IPR035952 |
| DBxref | PFAM:PF08551 |
| Product | rhomboid family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851919.1 | supercontig | KZ851919.1:436060..437326 + |
|
