You are here

Home

M747DRAFT_332405-T1, M747DRAFT_332405-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_332405-T1
Unique NameM747DRAFT_332405-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:237794..239389-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_332405-T1 ID=M747DRAFT_332405-T1|Name=M747DRAFT_332405-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1596bp|location=Sequence derived from alignment at KZ851920.1:237794..239389- (Aspergillus niger ATCC 13496)
CTTTAGCAGTCACATTGCCTTTGCGCATCTGTGCAGTCATTAACGGCGTC
CAATTTGCTACACACTAGACAGTCATCATGTCTCGCCCATCCTCCATGGC
GCAGCGCCCCCTCACGCTTACAGAGGAGCTCGAGAAGCTCGAGCAGTCCA
TCACCCTGACCCTCCAAGGTAACAACATCACTTGATGTAGCTCCTGCATA
CCCCTCTGACATTAGTCCTCACCAGAAATCGACCACAACTTTAGCCAAGC
CCACCGCATCGTCACGACAAATATTCTCCCCTTGGTCGAGCAATACGCAG
AGAGCTCCCGCGATGTCTGGGATGGCGCAAAGGTACATCACCTTCCATAC
CCCCAACAACGACCCCTGCAGGCACTCTAACTCCCCACCAGTTCTGGAAA
CAATTCTTCGAAGCCAGTGCCAATGTCTCCCTCTCCGGCTACGAAGAGAA
GCCCGACGGAGATACCACCGTCCTAGAACCGACCAACCTAACGGCCGAAG
AAGATCAAACCGTTACCGAAACACCCGGCGAAGACGACAGCCACCACCAA
CTCCACCGAGCCGACGACATCGAGCTCACTTCCCTCAGCCTCTCCTCCCA
CAGCACTCCTCGTGTCACTGGTCATGACAACCGCTACGCCGCCAATGACG
ATGACACCTCGTCCATCGCGCACCCAACCCCAGATACCCGCTTCCGCGAC
GATGACGACGACGAAAACGACCCCTACCTCCCGACCACCCCAGCCAAATA
CTCCTCCGCCAGAACCCATCACTACACCGACGACCTCTCCCACAACCAAT
CCCATACTCCAATGTCATCATCACCCTTTATTCCTCCCGCTGAGGACCCA
ATCATGCACCAGATGGCCGACAAAACATACCGCGTGCAAGCCACCCCGCT
CGGAAAGGGATACGGATACGAGTCCAGATCCAAGTTTACCGTTACACCCA
AGACAACAAACAACAGCAAGAAGTACGCGTACGATGACTCTCCTATCTCC
AGTCCGGAGCCGGAAGCCCCCAAATTGCATGCGGAGATCTTTTCGTCTCC
TATGAAGGGCGTGGAAACGCCGAATACGGGCCGCAAGAGGAGACCCAGTG
CGAATCAGCTGCGGATTACCCCGAAGCCCGGGATAAGTGTGCTGACTCCT
GCACGCGGCGGCGGTGGTGGTGCGAGGCGATCGGCTTGGGACAGTGATGA
TGACTTTGATGACGGGGATGATGAGGATATGGGACCGAGTCCTCCTAAGA
CGATGCAGTTTCATATACCGCAGAGTCGGTTGATGAAGACGCCTGGTGAG
TTAACACGTTCCCCCTGTTCCTATTTTCTTTGCTTGGTTTGTACGTCCAA
ATTTGCAGTACATGCTAACCAATGTATGCTATAACAGCCAAGGAAGCATC
AAAACGCATCGTGGAAGACCTGCTCTTCACCGCCGGAGCCAACGATACAA
CAGACGATCTACCCATCGAACAAAGTCCGAGTATCATCCAACGGGTGGAG
CGACTGGAAGATGAGACATTCTAGATGGCCATTACCCAAAATAGAAGACA
AGATTCATCCTTACCACCCATTGTATTTAATGACCGTAAGATAAAC
back to top

Coding sequence (CDS) from alignment at KZ851920.1:237794..239389-

>M747DRAFT_332405-T1 ID=M747DRAFT_332405-T1|Name=M747DRAFT_332405-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4956bp|location=Sequence derived from alignment at KZ851920.1:237794..239389- (Aspergillus niger ATCC 13496)
CCAAGGAAGCATCAAAACGCATCGTGGAAGACCTGCTCTTCACCGCCGGA
GCCAACGATACAACAGACGATCTACCCATCGAACAAAGTCCGAGTATCAT
CCAACGGGTGGAGCGACTGGAAGATGAGACATTCTAGTTCTGGAAACAAT
TCTTCGAAGCCAGTGCCAATGTCTCCCTCTCCGGCTACGAAGAGAAGCCC
GACGGAGATACCACCGTCCTAGAACCGACCAACCTAACGGCCGAAGAAGA
TCAAACCGTTACCGAAACACCCGGCGAAGACGACAGCCACCACCAACTCC
ACCGAGCCGACGACATCGAGCTCACTTCCCTCAGCCTCTCCTCCCACAGC
ACTCCTCGTGTCACTGGTCATGACAACCGCTACGCCGCCAATGACGATGA
CACCTCGTCCATCGCGCACCCAACCCCAGATACCCGCTTCCGCGACGATG
ACGACGACGAAAACGACCCCTACCTCCCGACCACCCCAGCCAAATACTCC
TCCGCCAGAACCCATCACTACACCGACGACCTCTCCCACAACCAATCCCA
TACTCCAATGTCATCATCACCCTTTATTCCTCCCGCTGAGGACCCAATCA
TGCACCAGATGGCCGACAAAACATACCGCGTGCAAGCCACCCCGCTCGGA
AAGGGATACGGATACGAGTCCAGATCCAAGTTTACCGTTACACCCAAGAC
AACAAACAACAGCAAGAAGTACGCGTACGATGACTCTCCTATCTCCAGTC
CGGAGCCGGAAGCCCCCAAATTGCATGCGGAGATCTTTTCGTCTCCTATG
AAGGGCGTGGAAACGCCGAATACGGGCCGCAAGAGGAGACCCAGTGCGAA
TCAGCTGCGGATTACCCCGAAGCCCGGGATAAGTGTGCTGACTCCTGCAC
GCGGCGGCGGTGGTGGTGCGAGGCGATCGGCTTGGGACAGTGATGATGAC
TTTGATGACGGGGATGATGAGGATATGGGACCGAGTCCTCCTAAGACGAT
GCAGTTTCATATACCGCAGAGTCGGTTGATGAAGACGCCTGAAATCGACC
ACAACTTTAGCCAAGCCCACCGCATCGTCACGACAAATATTCTCCCCTTG
GTCGAGCAATACGCAGAGAGCTCCCGCGATGTCTGGGATGGCGCAAAGAT
GTCTCGCCCATCCTCCATGGCGCAGCGCCCCCTCACGCTTACAGAGGAGC
TCGAGAAGCTCGAGCAGTCCATCACCCTGACCCTCCAAGCCAAGGAAGCA
TCAAAACGCATCGTGGAAGACCTGCTCTTCACCGCCGGAGCCAACGATAC
AACAGACGATCTACCCATCGAACAAAGTCCGAGTATCATCCAACGGGTGG
AGCGACTGGAAGATGAGACATTCTAGTTCTGGAAACAATTCTTCGAAGCC
AGTGCCAATGTCTCCCTCTCCGGCTACGAAGAGAAGCCCGACGGAGATAC
CACCGTCCTAGAACCGACCAACCTAACGGCCGAAGAAGATCAAACCGTTA
CCGAAACACCCGGCGAAGACGACAGCCACCACCAACTCCACCGAGCCGAC
GACATCGAGCTCACTTCCCTCAGCCTCTCCTCCCACAGCACTCCTCGTGT
CACTGGTCATGACAACCGCTACGCCGCCAATGACGATGACACCTCGTCCA
TCGCGCACCCAACCCCAGATACCCGCTTCCGCGACGATGACGACGACGAA
AACGACCCCTACCTCCCGACCACCCCAGCCAAATACTCCTCCGCCAGAAC
CCATCACTACACCGACGACCTCTCCCACAACCAATCCCATACTCCAATGT
CATCATCACCCTTTATTCCTCCCGCTGAGGACCCAATCATGCACCAGATG
GCCGACAAAACATACCGCGTGCAAGCCACCCCGCTCGGAAAGGGATACGG
ATACGAGTCCAGATCCAAGTTTACCGTTACACCCAAGACAACAAACAACA
GCAAGAAGTACGCGTACGATGACTCTCCTATCTCCAGTCCGGAGCCGGAA
GCCCCCAAATTGCATGCGGAGATCTTTTCGTCTCCTATGAAGGGCGTGGA
AACGCCGAATACGGGCCGCAAGAGGAGACCCAGTGCGAATCAGCTGCGGA
TTACCCCGAAGCCCGGGATAAGTGTGCTGACTCCTGCACGCGGCGGCGGT
GGTGGTGCGAGGCGATCGGCTTGGGACAGTGATGATGACTTTGATGACGG
GGATGATGAGGATATGGGACCGAGTCCTCCTAAGACGATGCAGTTTCATA
TACCGCAGAGTCGGTTGATGAAGACGCCTGAAATCGACCACAACTTTAGC
CAAGCCCACCGCATCGTCACGACAAATATTCTCCCCTTGGTCGAGCAATA
CGCAGAGAGCTCCCGCGATGTCTGGGATGGCGCAAAGATGTCTCGCCCAT
CCTCCATGGCGCAGCGCCCCCTCACGCTTACAGAGGAGCTCGAGAAGCTC
GAGCAGTCCATCACCCTGACCCTCCAAGCCAAGGAAGCATCAAAACGCAT
CGTGGAAGACCTGCTCTTCACCGCCGGAGCCAACGATACAACAGACGATC
TACCCATCGAACAAAGTCCGAGTATCATCCAACGGGTGGAGCGACTGGAA
GATGAGACATTCTAGTTCTGGAAACAATTCTTCGAAGCCAGTGCCAATGT
CTCCCTCTCCGGCTACGAAGAGAAGCCCGACGGAGATACCACCGTCCTAG
AACCGACCAACCTAACGGCCGAAGAAGATCAAACCGTTACCGAAACACCC
GGCGAAGACGACAGCCACCACCAACTCCACCGAGCCGACGACATCGAGCT
CACTTCCCTCAGCCTCTCCTCCCACAGCACTCCTCGTGTCACTGGTCATG
ACAACCGCTACGCCGCCAATGACGATGACACCTCGTCCATCGCGCACCCA
ACCCCAGATACCCGCTTCCGCGACGATGACGACGACGAAAACGACCCCTA
CCTCCCGACCACCCCAGCCAAATACTCCTCCGCCAGAACCCATCACTACA
CCGACGACCTCTCCCACAACCAATCCCATACTCCAATGTCATCATCACCC
TTTATTCCTCCCGCTGAGGACCCAATCATGCACCAGATGGCCGACAAAAC
ATACCGCGTGCAAGCCACCCCGCTCGGAAAGGGATACGGATACGAGTCCA
GATCCAAGTTTACCGTTACACCCAAGACAACAAACAACAGCAAGAAGTAC
GCGTACGATGACTCTCCTATCTCCAGTCCGGAGCCGGAAGCCCCCAAATT
GCATGCGGAGATCTTTTCGTCTCCTATGAAGGGCGTGGAAACGCCGAATA
CGGGCCGCAAGAGGAGACCCAGTGCGAATCAGCTGCGGATTACCCCGAAG
CCCGGGATAAGTGTGCTGACTCCTGCACGCGGCGGCGGTGGTGGTGCGAG
GCGATCGGCTTGGGACAGTGATGATGACTTTGATGACGGGGATGATGAGG
ATATGGGACCGAGTCCTCCTAAGACGATGCAGTTTCATATACCGCAGAGT
CGGTTGATGAAGACGCCTGAAATCGACCACAACTTTAGCCAAGCCCACCG
CATCGTCACGACAAATATTCTCCCCTTGGTCGAGCAATACGCAGAGAGCT
CCCGCGATGTCTGGGATGGCGCAAAGATGTCTCGCCCATCCTCCATGGCG
CAGCGCCCCCTCACGCTTACAGAGGAGCTCGAGAAGCTCGAGCAGTCCAT
CACCCTGACCCTCCAAGCCAAGGAAGCATCAAAACGCATCGTGGAAGACC
TGCTCTTCACCGCCGGAGCCAACGATACAACAGACGATCTACCCATCGAA
CAAAGTCCGAGTATCATCCAACGGGTGGAGCGACTGGAAGATGAGACATT
CTAGTTCTGGAAACAATTCTTCGAAGCCAGTGCCAATGTCTCCCTCTCCG
GCTACGAAGAGAAGCCCGACGGAGATACCACCGTCCTAGAACCGACCAAC
CTAACGGCCGAAGAAGATCAAACCGTTACCGAAACACCCGGCGAAGACGA
CAGCCACCACCAACTCCACCGAGCCGACGACATCGAGCTCACTTCCCTCA
GCCTCTCCTCCCACAGCACTCCTCGTGTCACTGGTCATGACAACCGCTAC
GCCGCCAATGACGATGACACCTCGTCCATCGCGCACCCAACCCCAGATAC
CCGCTTCCGCGACGATGACGACGACGAAAACGACCCCTACCTCCCGACCA
CCCCAGCCAAATACTCCTCCGCCAGAACCCATCACTACACCGACGACCTC
TCCCACAACCAATCCCATACTCCAATGTCATCATCACCCTTTATTCCTCC
CGCTGAGGACCCAATCATGCACCAGATGGCCGACAAAACATACCGCGTGC
AAGCCACCCCGCTCGGAAAGGGATACGGATACGAGTCCAGATCCAAGTTT
ACCGTTACACCCAAGACAACAAACAACAGCAAGAAGTACGCGTACGATGA
CTCTCCTATCTCCAGTCCGGAGCCGGAAGCCCCCAAATTGCATGCGGAGA
TCTTTTCGTCTCCTATGAAGGGCGTGGAAACGCCGAATACGGGCCGCAAG
AGGAGACCCAGTGCGAATCAGCTGCGGATTACCCCGAAGCCCGGGATAAG
TGTGCTGACTCCTGCACGCGGCGGCGGTGGTGGTGCGAGGCGATCGGCTT
GGGACAGTGATGATGACTTTGATGACGGGGATGATGAGGATATGGGACCG
AGTCCTCCTAAGACGATGCAGTTTCATATACCGCAGAGTCGGTTGATGAA
GACGCCTGAAATCGACCACAACTTTAGCCAAGCCCACCGCATCGTCACGA
CAAATATTCTCCCCTTGGTCGAGCAATACGCAGAGAGCTCCCGCGATGTC
TGGGATGGCGCAAAGATGTCTCGCCCATCCTCCATGGCGCAGCGCCCCCT
CACGCTTACAGAGGAGCTCGAGAAGCTCGAGCAGTCCATCACCCTGACCC
TCCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042729DASH complex
GO:0072686mitotic spindle
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_332405M747DRAFT_332405Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332405-T1M747DRAFT_332405-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332405-T1.cdsM747DRAFT_332405-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332405-T1.utr3p1M747DRAFT_332405-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332405-T1.exon4M747DRAFT_332405-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_332405-T1.exon3M747DRAFT_332405-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_332405-T1.exon2M747DRAFT_332405-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_332405-T1.exon1M747DRAFT_332405-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332405-T1.utr5p1M747DRAFT_332405-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013964
DBxrefPFAM:PF08655
ProductDASH complex subunit ask1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:237794..239389 -
Powered by Drupal