You are here

Home

M747DRAFT_332542-T1, M747DRAFT_332542-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_332542-T1
Unique NameM747DRAFT_332542-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:141823..143349+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_332542-T1 ID=M747DRAFT_332542-T1|Name=M747DRAFT_332542-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1527bp|location=Sequence derived from alignment at KZ851921.1:141823..143349+ (Aspergillus niger ATCC 13496)
ATGATCCCACCACCTAGTATCAAGCTGATTTACGACAATCAATGCGGCCT
GTACCCTATACTGGCCATCCCAGCGTCTATGGTTGACTCTCACTTCCCAT
ATCCTCTGTGTGCTTCCAATTGCAGACGCAAACAACAATGGGTACCCGAC
TTGACCCCATCAGTGCGTCACCATCAGTGACCGTCCACAACACGAACAAG
ACCAACAACAGCCCCTCATCACCTTCCTGAACTGGTCTATCCCGAAGTGC
CGAATGCAGACGCTCAAACGACCTAATCGAAATTCCGGCTGCCGGCATGA
ATGAAACCTTGTTCCAGCTGCCGCGTGTTCCGTTTATCCAAGGACACCGC
TACACCGTCCGAGCAACAGAGGGTCCGATCAACCAAACGACCAACCACCA
GCTGGAGAGTATGGGCGAGCCCGAACGAGGCAATTTAAAGTCAGTGCTCG
GTATGTTGACCCTCTTCTACCCGAGGCAATTGCTCTTGACTGCTTTGTTT
TACCTCTGCTGCCTATGGTCACTTCTCCACCCGATTGCTGGAGAATTATC
CCTAGATGTCCAGACATAGAGACATGATGAAAGTGGCGTCAGCATGATCA
CAGTCACACGAACACCCTTCCCCATCCCCATCCATGTTTACTGCACCCCG
CACGTAATACGCATAACTTATAAGCTCCCCCGGATCCTCGCCCCAGGATC
CTTCTCCCCACCAACACCAGCATCAGAATCCTTCTCTCCACTCTACTACC
CTTACCCCAGACTCAAACACAAGTACACTCACAATGACCTACTCAACCAC
CCCCATCGACGTTCTCCGTGACGCTGAACGCGTCTTCGAAGTGATCAAAA
ACCAAGGCATCGCCCTCATCCCCGGCAGCATCGGCTACGGCCTAGTCGCC
AGCGACCCAGCAGCCCTGGACCGGCTCTTCACGACGAAGCGCCGGAAACC
ACACAAGAAGCACGCCATGATCGGAAGCTACGCGCTCCACCAAGAAATCC
ACGTCCTCCCGGCCCGCGAAGAGTCCATGGTTCGGACTCTAACCGTGGAT
CTAGACGTGCCCGTCGGCGTTGCGGCCCCGTTTCGGGCCGACCACCCAAT
CATCCAGAAACTCGGCCCTGAGTTGCTCTCGCGCTGCACGCACGACGGCA
CCCTCTCCATGCTAGTAAATGGGGGACCCTTACAGGATGAACTCATTCGA
TTGTGCCACGCTGCGGGGCTACCCCTGCTCGGTTCATCGGCTAATATCTC
GGGGTCGGGGATGAAGGTCCGCCTTGAGGATATTGAGCCTGAGATCGTGG
AGGCCGCGGATATCGTTATCGATTATGGCAAGCGCACGTTTAGTGTGCCG
CGCGCGTCATCGACGATCATCAACTTTCGGGATATGAAGCTCGTGCGGTA
TGGCGCTTGCTATGATGTAATTCAAGACGTATTGAGGAAGTTCTATGGGG
TGGAGCTGCCGGAGGATCCGGGCAAGGACGAGTTGTTTTCGGGACATATT
GATGTTCAGCAGGCGACTGTGTATTGA
back to top

Coding sequence (CDS) from alignment at KZ851921.1:141823..143349+

>M747DRAFT_332542-T1 ID=M747DRAFT_332542-T1|Name=M747DRAFT_332542-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3186bp|location=Sequence derived from alignment at KZ851921.1:141823..143349+ (Aspergillus niger ATCC 13496)
ATGATCCCACCACCTAGTATCAAGCTGATTTACGACAATCAATGCGGCCT
GTACCCTATACTGGCCATCCCAGCGTCTATGGTTGACTCTCACTTCCCAT
ATCCTCTGTGTGCTTCCAATTGCAGACGCAAACAACAATGGGTACCCGAC
TTGACCCCATCACTGCCGCGTGTTCCGTTTATCCAAGGACACCGCTACAC
CGTCCGAGCAACAGAGGGTCCGATCAACCAAACGACCAACCACCAGCTGG
AGAGTATGGGCGAGCCCGAACGAGGCAATTTAAAGTCAGTGCTCGACTCA
AACACAAGTACACTCACAATGACCTACTCAACCACCCCCATCGACGTTCT
CCGTGACGCTGAACGCGTCTTCGAAGTGATCAAAAACCAAGGCATCGCCC
TCATCCCCGGCAGCATCGGCTACGGCCTAGTCGCCAGCGACCCAGCAGCC
CTGGACCGGCTCTTCACGACGAAGCGCCGGAAACCACACAAGAAGCACGC
CATGATCGGAAGCTACGCGCTCCACCAAGAAATCCACGTCCTCCCGGCCC
GCGAAGAGTCCATGGTTCGGACTCTAACCGTGGATCTAGACGTGCCCGTC
GGCGTTGCGGCCCCGTTTCGGGCCGACCACCCAATCATCCAGAAACTCGG
CCCTGAGTTGCTCTCGCGCTGCACGCACGACGGCACCCTCTCCATGCTAG
TAAATGGGGGACCCTTACAGGATGAACTCATTCGATTGTGCCACGCTGCG
GGGCTACCCCTGCTCGGTTCATCGGCTAATATCTCGGGGTCGGGGATGAA
GGTCCGCCTTGAGGATATTGAGCCTGAGATCGTGGAGGCCGCGGATATCG
TTATCGATTATGGCAAGCGCACGTTTAGTGTGCCGCGCGCGTCATCGACG
ATCATCAACTTTCGGGATATGAAGCTCGTGCGGTATGGCGCTTGCTATGA
TGTAATTCAAGACGTATTGAGGAAGTTCTATGGGGTGGAGCTGCCGGAGG
ATCCGGGCAAGGACGAGTTGTTTTCGGGACATATTGATGTTCAGCAGGCG
ACTGTGTATTGAATGATCCCACCACCTAGTATCAAGCTGATTTACGACAA
TCAATGCGGCCTGTACCCTATACTGGCCATCCCAGCGTCTATGGTTGACT
CTCACTTCCCATATCCTCTGTGTGCTTCCAATTGCAGACGCAAACAACAA
TGGGTACCCGACTTGACCCCATCACTGCCGCGTGTTCCGTTTATCCAAGG
ACACCGCTACACCGTCCGAGCAACAGAGGGTCCGATCAACCAAACGACCA
ACCACCAGCTGGAGAGTATGGGCGAGCCCGAACGAGGCAATTTAAAGTCA
GTGCTCGACTCAAACACAAGTACACTCACAATGACCTACTCAACCACCCC
CATCGACGTTCTCCGTGACGCTGAACGCGTCTTCGAAGTGATCAAAAACC
AAGGCATCGCCCTCATCCCCGGCAGCATCGGCTACGGCCTAGTCGCCAGC
GACCCAGCAGCCCTGGACCGGCTCTTCACGACGAAGCGCCGGAAACCACA
CAAGAAGCACGCCATGATCGGAAGCTACGCGCTCCACCAAGAAATCCACG
TCCTCCCGGCCCGCGAAGAGTCCATGGTTCGGACTCTAACCGTGGATCTA
GACGTGCCCGTCGGCGTTGCGGCCCCGTTTCGGGCCGACCACCCAATCAT
CCAGAAACTCGGCCCTGAGTTGCTCTCGCGCTGCACGCACGACGGCACCC
TCTCCATGCTAGTAAATGGGGGACCCTTACAGGATGAACTCATTCGATTG
TGCCACGCTGCGGGGCTACCCCTGCTCGGTTCATCGGCTAATATCTCGGG
GTCGGGGATGAAGGTCCGCCTTGAGGATATTGAGCCTGAGATCGTGGAGG
CCGCGGATATCGTTATCGATTATGGCAAGCGCACGTTTAGTGTGCCGCGC
GCGTCATCGACGATCATCAACTTTCGGGATATGAAGCTCGTGCGGTATGG
CGCTTGCTATGATGTAATTCAAGACGTATTGAGGAAGTTCTATGGGGTGG
AGCTGCCGGAGGATCCGGGCAAGGACGAGTTGTTTTCGGGACATATTGAT
GTTCAGCAGGCGACTGTGTATTGAATGATCCCACCACCTAGTATCAAGCT
GATTTACGACAATCAATGCGGCCTGTACCCTATACTGGCCATCCCAGCGT
CTATGGTTGACTCTCACTTCCCATATCCTCTGTGTGCTTCCAATTGCAGA
CGCAAACAACAATGGGTACCCGACTTGACCCCATCACTGCCGCGTGTTCC
GTTTATCCAAGGACACCGCTACACCGTCCGAGCAACAGAGGGTCCGATCA
ACCAAACGACCAACCACCAGCTGGAGAGTATGGGCGAGCCCGAACGAGGC
AATTTAAAGTCAGTGCTCGACTCAAACACAAGTACACTCACAATGACCTA
CTCAACCACCCCCATCGACGTTCTCCGTGACGCTGAACGCGTCTTCGAAG
TGATCAAAAACCAAGGCATCGCCCTCATCCCCGGCAGCATCGGCTACGGC
CTAGTCGCCAGCGACCCAGCAGCCCTGGACCGGCTCTTCACGACGAAGCG
CCGGAAACCACACAAGAAGCACGCCATGATCGGAAGCTACGCGCTCCACC
AAGAAATCCACGTCCTCCCGGCCCGCGAAGAGTCCATGGTTCGGACTCTA
ACCGTGGATCTAGACGTGCCCGTCGGCGTTGCGGCCCCGTTTCGGGCCGA
CCACCCAATCATCCAGAAACTCGGCCCTGAGTTGCTCTCGCGCTGCACGC
ACGACGGCACCCTCTCCATGCTAGTAAATGGGGGACCCTTACAGGATGAA
CTCATTCGATTGTGCCACGCTGCGGGGCTACCCCTGCTCGGTTCATCGGC
TAATATCTCGGGGTCGGGGATGAAGGTCCGCCTTGAGGATATTGAGCCTG
AGATCGTGGAGGCCGCGGATATCGTTATCGATTATGGCAAGCGCACGTTT
AGTGTGCCGCGCGCGTCATCGACGATCATCAACTTTCGGGATATGAAGCT
CGTGCGGTATGGCGCTTGCTATGATGTAATTCAAGACGTATTGAGGAAGT
TCTATGGGGTGGAGCTGCCGGAGGATCCGGGCAAGGACGAGTTGTTTTCG
GGACATATTGATGTTCAGCAGGCGACTGTGTATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_332542M747DRAFT_332542Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332542-T1.exon1M747DRAFT_332542-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_332542-T1.exon2M747DRAFT_332542-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_332542-T1.exon3M747DRAFT_332542-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332542-T1.cdsM747DRAFT_332542-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332542-T1M747DRAFT_332542-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR006070
DBxrefPFAM:PF01300
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:141823..143349 +
Powered by Drupal