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M747DRAFT_333612-T1, M747DRAFT_333612-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_333612-T1
Unique NameM747DRAFT_333612-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851930.1:23031..23919-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_333612-T1 ID=M747DRAFT_333612-T1|Name=M747DRAFT_333612-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=889bp|location=Sequence derived from alignment at KZ851930.1:23031..23919- (Aspergillus niger ATCC 13496)
ATGGCCGACGCAGAGCTTGAAGAGGTCAGTATGGACCTTCCCACCTACGT
TCAACTTTCCCAGTCTTCCATGGACATTCATGCTTGTTGAATCTCCTTCG
GGTCCACACCTTCGACACTTTTCGTATCAAATGCTTAAATGTGGTATAGA
TCAGACGGGCCCGTCTTGCCCAGCTTCAGCAACAAGGTGGTGGCGCACGT
GGTGGCCCTTCGGACGGCAACCAGGAGGAACAGAGAAGGTATGCTTCCCA
GATGTTGTTTTTGCTTCTGCGCTTGTAAATCCTTACTGACTTGTCGCTCC
ACTTTAGGCAAGCTGAAGGTATGCGCAATCTCATAATCCATTAGAATAGG
ACATGCTAGAGGAATTGTCCTGCCTACATCGCCCTTTCTCGAACAATTTG
CTTATTCTTTTTACAAATAGCCGACCGCCGCGCCACTATCCTGAACCAGA
TCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGTTAAG
GAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCCAGTC
CGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTGCTGA
ACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAATTGTA
ATCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTTGGATCTGTG
AGATGTGTTTTTAGCGAAGGGTGTTCGGTTTGTGCTGAATGCTTGCCATT
TTCAATGATACCTCCAGCTCTCCGATTGCAGAGCAGCTTTGCGGCGCAGC
TGTTCTGCCATGAAAAGTACAGTTTCTCCATCTCGATAGTCGAGCAGCAG
CTCCTAATAATACTTGGCCAAGTAATCATTCAGGAAGTG
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Coding sequence (CDS) from alignment at KZ851930.1:23031..23919-

>M747DRAFT_333612-T1 ID=M747DRAFT_333612-T1|Name=M747DRAFT_333612-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1620bp|location=Sequence derived from alignment at KZ851930.1:23031..23919- (Aspergillus niger ATCC 13496)
CCGACCGCCGCGCCACTATCCTGAACCAGATCCTCGAGCCCGAAGCCGCC
GATCGTTTGGGTCGCATCCGCCTTGTTAAGGAATCCCGCGCTGCTGACGT
CGAATCCCGTCTCATCATGCTCGCCCAGTCCGGTCAATTGCGCCAGAAGG
TCACCGAGGACCAGCTCAAGCAGCTGCTGAACGCCATGGCCGAGAACCAG
CGCAAGGATGAGGAGGAGCACAAAATTGTAATCAACCGACGCGGCGGCTG
GGATGATGATGACGACCTGTTGGATCTGTGAGCAAGCTGAAGATCAGACG
GGCCCGTCTTGCCCAGCTTCAGCAACAAGGTGGTGGCGCACGTGGTGGCC
CTTCGGACGGCAACCAGGAGGAACAGAGAAGATGGCCGACGCAGAGCTTG
AAGAGCCGACCGCCGCGCCACTATCCTGAACCAGATCCTCGAGCCCGAAG
CCGCCGATCGTTTGGGTCGCATCCGCCTTGTTAAGGAATCCCGCGCTGCT
GACGTCGAATCCCGTCTCATCATGCTCGCCCAGTCCGGTCAATTGCGCCA
GAAGGTCACCGAGGACCAGCTCAAGCAGCTGCTGAACGCCATGGCCGAGA
ACCAGCGCAAGGATGAGGAGGAGCACAAAATTGTAATCAACCGACGCGGC
GGCTGGGATGATGATGACGACCTGTTGGATCTGTGAGCAAGCTGAAGATC
AGACGGGCCCGTCTTGCCCAGCTTCAGCAACAAGGTGGTGGCGCACGTGG
TGGCCCTTCGGACGGCAACCAGGAGGAACAGAGAAGATGGCCGACGCAGA
GCTTGAAGAGCCGACCGCCGCGCCACTATCCTGAACCAGATCCTCGAGCC
CGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGTTAAGGAATCCCGCG
CTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCCAGTCCGGTCAATTG
CGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTGCTGAACGCCATGGC
CGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAATTGTAATCAACCGAC
GCGGCGGCTGGGATGATGATGACGACCTGTTGGATCTGTGAGCAAGCTGA
AGATCAGACGGGCCCGTCTTGCCCAGCTTCAGCAACAAGGTGGTGGCGCA
CGTGGTGGCCCTTCGGACGGCAACCAGGAGGAACAGAGAAGATGGCCGAC
GCAGAGCTTGAAGAGCCGACCGCCGCGCCACTATCCTGAACCAGATCCTC
GAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGTTAAGGAATC
CCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCCAGTCCGGTC
AATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTGCTGAACGCC
ATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAATTGTAATCAA
CCGACGCGGCGGCTGGGATGATGATGACGACCTGTTGGATCTGTGAGCAA
GCTGAAGATCAGACGGGCCCGTCTTGCCCAGCTTCAGCAACAAGGTGGTG
GCGCACGTGGTGGCCCTTCGGACGGCAACCAGGAGGAACAGAGAAGATGG
CCGACGCAGAGCTTGAAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_333612M747DRAFT_333612Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333612-T1M747DRAFT_333612-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333612-T1.cdsM747DRAFT_333612-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333612-T1.utr3p1M747DRAFT_333612-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333612-T1.exon4M747DRAFT_333612-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_333612-T1.exon3M747DRAFT_333612-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_333612-T1.exon2M747DRAFT_333612-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_333612-T1.exon1M747DRAFT_333612-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteBUSCO:EOG09265HEP
DBxrefInterPro:IPR036883
DBxrefInterPro:IPR002836
DBxrefPFAM:PF01984
ProductDNA-binding TFAR19-related protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851930.1supercontigKZ851930.1:23031..23919 -
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