You are here

Home

M747DRAFT_333638-T1, M747DRAFT_333638-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_333638-T1
Unique NameM747DRAFT_333638-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851930.1:105604..106814+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_333638-T1 ID=M747DRAFT_333638-T1|Name=M747DRAFT_333638-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1211bp|location=Sequence derived from alignment at KZ851930.1:105604..106814+ (Aspergillus niger ATCC 13496)
CTCGGCAAGAGTCCAGGCGCATTTTGCTACACTTGACACCCAGCACTTCT
TGATCTAGGCTCTGGACATATTTTCTCCGTGTCCTACACTATGGCGGATT
CTATGAACCCTCCCCTCTCGTACGAGGCATCAGCCACAACTACTCATCCG
CACGTCGGAACCACCCTCCCAACGGAGGTGATCTCATGTCTGAAGAATTC
TCGATTCGTGAGTATTGCGAATTCTATAGCCCTGTATGGTTGTCAGGCTT
AAAAGCTGATCCTTTACGTCGCCAGCTTCATCTTGCAACATGTGATGGCT
TGACCCCGCACATCTCGCTCATGTCCTACACCTACCTCCCCTCGACTCCC
TATGACCCGTATCCGACGATCATCATGACCACCAACCCCTCCTCTCGCAA
AACCAACCATCTGCTCACCAACCCTTGCGTGTCCCTTTTGGTCCATGACT
GGGTTTCGCACCGTCCGCCTACCCGGGCTCCCAATCCCGATGGTCGCGAA
GGGTCTCCCCCACCTGCAGCGACACGGTCATCCTTGGCGAGCCTGCTGTT
GAACCTGAACACAAGTGCCCTTTCCAGTATCTCCACAACTATCGCCGGTA
CCGCGCGCTTTCTGGAGCCTGGCTCTGAAGAGGAGGCTTGGTGCAAGAGA
CAACACTTGGAGAACAACACCTTCGAGGAAGAGCTGGGCACTTTCGGGCA
GCAGCTGCAACAGCAACCCGGTCAAAGAAGGCCCAGTATTTCAATTGACA
GCGATGTCCGCGTCGTAACCGTTCAGGTGCGCGAGGGCCGTATCGCAGAC
TGGAAGGGTGGCGTGAGGGATTGGCAGTTGGTATCGGAGGGGGAGGGCAC
GGAGGGAACGATGGTTAATGGTATTGCTCCCGTGTAATGCTTGCTCGAAT
CTGTTCTATTCTGTAAATCATAGTCTATGAGTGGAAATAACATTTTGGGA
AATTGCAAGCAAGCCTAGCTCCAGTCAGTCAGTCATCGGAAGGTTTCGGC
GGACTCGGTTCCTGAAGATCTCTGCAGACACGATCTCGCAGTCATGCTCC
TGGACGAATATGGAAGTATCCGCTGCTGTACATAGAAAATTGAAAGCTAC
ATGCAAACTCAATCTCAAATTAAGCTCTGGGGAGAGTGAAAGCAAAGCAC
GAAATTGAGATCGGAATTGCGTTCATCATCACATGACACGATCCGGGGGA
GTCAGTGACGT
back to top

Coding sequence (CDS) from alignment at KZ851930.1:105604..106814+

>M747DRAFT_333638-T1 ID=M747DRAFT_333638-T1|Name=M747DRAFT_333638-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1458bp|location=Sequence derived from alignment at KZ851930.1:105604..106814+ (Aspergillus niger ATCC 13496)
ATGGCGGATTCTATGAACCCTCCCCTCTCGTACGAGGCATCAGCCACAAC
TACTCATCCGCACGTCGGAACCACCCTCCCAACGGAGGTGATCTCATGTC
TGAAGAATTCTCGATTCCTTCATCTTGCAACATGTGATGGCTTGACCCCG
CACATCTCGCTCATGTCCTACACCTACCTCCCCTCGACTCCCTATGACCC
GTATCCGACGATCATCATGACCACCAACCCCTCCTCTCGCAAAACCAACC
ATCTGCTCACCAACCCTTGCGTGTCCCTTTTGGTCCATGACTGGGTTTCG
CACCGTCCGCCTACCCGGGCTCCCAATCCCGATGGTCGCGAAGGGTCTCC
CCCACCTGCAGCGACACGGTCATCCTTGGCGAGCCTGCTGTTGAACCTGA
ACACAAGTGCCCTTTCCAGTATCTCCACAACTATCGCCGGTACCGCGCGC
TTTCTGGAGCCTGGCTCTGAAGAGGAGGCTTGGTGCAAGAGACAACACTT
GGAGAACAACACCTTCGAGGAAGAGCTGGGCACTTTCGGGCAGCAGCTGC
AACAGCAACCCGGTCAAAGAAGGCCCAGTATTTCAATTGACAGCGATGTC
CGCGTCGTAACCGTTCAGGTGCGCGAGGGCCGTATCGCAGACTGGAAGGG
TGGCGTGAGGGATTGGCAGTTGGTATCGGAGGGGGAGGGCACGGAGGGAA
CGATGGTTAATGGTATTGCTCCCGTGTAAATGGCGGATTCTATGAACCCT
CCCCTCTCGTACGAGGCATCAGCCACAACTACTCATCCGCACGTCGGAAC
CACCCTCCCAACGGAGGTGATCTCATGTCTGAAGAATTCTCGATTCCTTC
ATCTTGCAACATGTGATGGCTTGACCCCGCACATCTCGCTCATGTCCTAC
ACCTACCTCCCCTCGACTCCCTATGACCCGTATCCGACGATCATCATGAC
CACCAACCCCTCCTCTCGCAAAACCAACCATCTGCTCACCAACCCTTGCG
TGTCCCTTTTGGTCCATGACTGGGTTTCGCACCGTCCGCCTACCCGGGCT
CCCAATCCCGATGGTCGCGAAGGGTCTCCCCCACCTGCAGCGACACGGTC
ATCCTTGGCGAGCCTGCTGTTGAACCTGAACACAAGTGCCCTTTCCAGTA
TCTCCACAACTATCGCCGGTACCGCGCGCTTTCTGGAGCCTGGCTCTGAA
GAGGAGGCTTGGTGCAAGAGACAACACTTGGAGAACAACACCTTCGAGGA
AGAGCTGGGCACTTTCGGGCAGCAGCTGCAACAGCAACCCGGTCAAAGAA
GGCCCAGTATTTCAATTGACAGCGATGTCCGCGTCGTAACCGTTCAGGTG
CGCGAGGGCCGTATCGCAGACTGGAAGGGTGGCGTGAGGGATTGGCAGTT
GGTATCGGAGGGGGAGGGCACGGAGGGAACGATGGTTAATGGTATTGCTC
CCGTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0048037obsolete cofactor binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_333638M747DRAFT_333638Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333638-T1.utr5p1M747DRAFT_333638-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333638-T1.exon1M747DRAFT_333638-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_333638-T1.exon2M747DRAFT_333638-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333638-T1.cdsM747DRAFT_333638-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333638-T1.utr3p1M747DRAFT_333638-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333638-T1M747DRAFT_333638-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519301.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR011576
DBxrefInterPro:IPR012349
DBxrefPFAM:PF01243
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851930.1supercontigKZ851930.1:105604..106814 +
Powered by Drupal