You are here

Home

M747DRAFT_333788-T1, M747DRAFT_333788-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_333788-T1
Unique NameM747DRAFT_333788-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:300201..301372+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_333788-T1 ID=M747DRAFT_333788-T1|Name=M747DRAFT_333788-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1172bp|location=Sequence derived from alignment at KZ851931.1:300201..301372+ (Aspergillus niger ATCC 13496)
CTGTTCGTGATATAATCGAAGATAGGAAATACGGAACTATCTACAGGCTT
CTTGGATACTAATTATCCCTCACCAGCTGACAAATCTCTCCACTATCTCA
CTCAACGATGCCGTCATCTACTCCCGCAGACGAGAAACGGCAGCGCAAGA
AGCTCCAAAACCGAGTAAATCAGAGAGCACGTCGTGAGTCATTTAGAAGC
CAAACACCGACTACCAAGCTAATATTATCATCTAGGTCTCCGGCTCAAGA
ATGAGCAGGGCAAAGGCCAAACCACCCGTCCATACAGCGTCCACCGCTGG
CGAGTCTCAGAATACGAGACACCATCATCATCAACCTCACCAACCAATAA
CCACTCACACACCCTTTCTCAAGCACAGAACCTCTCTCAAACACAAACAC
AAACAGACCCTGAACCCTCCCTGACTTCATCATCATCATCATCATCATCA
TCCTCATCACCCTCACCCCCCTCCCTACCCACCTCCTCCACCCCAAATAT
ATCCTCAGACCACCTCCTCCACCTAATAACCCACAACGTCTTCCGCGCCC
TATACACCAACAAACTCCTCCTCTACGAGCTCTCCACAGCCCTCATTCCC
GGCCCAACTCCCCAGTCATCCATCCACCTCATCCACGAAGGCCTCACCTT
CCCCATCTACGCCACAACCATCCCCAACTCCTACCCATCCCCTATCCCCG
CATCCCTCTTCCCCACGCCCTCCCAGCGGAATCTCATCCACTGCTCGTGG
ATAGATCTCCTGCCGTTTCCGCGTATGCGCGAGAATCTGATCAAGTGGGA
AGCGTGCTTTGATCATGGCGAGTTTGTGAGGGATTTGGTGGGGGCGTATG
TTATGCAGGAGTGGGTGTTGAGGAGTGGGGAGAGTGTGGAGGGGGAAATT
GAGGGGAGGGTGGTGGTTGAGGTGGAGGGGGATGGTGATGATGAGGTTAC
GGGGAATAATAGGAACGGGTGGATTGTTTGGGGAGAGCCGCATTGTAAGG
AGAGTTGGGAGGTGACACCGGGGTTTTTGAGGAAGTGGGGGTGGGTTGTG
GAAGGGTGTGTGGAGGAGGTGGTGAGGTGTAGTAATTATTGGAGGGTGGG
GAGGGGGGAGGAGGAAATTAGGGTTGTTTTGGGGGGTTCATAGTATACAA
TGTTGATAGTATTTGGGTATAA
back to top

Coding sequence (CDS) from alignment at KZ851931.1:300201..301372+

>M747DRAFT_333788-T1 ID=M747DRAFT_333788-T1|Name=M747DRAFT_333788-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2727bp|location=Sequence derived from alignment at KZ851931.1:300201..301372+ (Aspergillus niger ATCC 13496)
ATGCCGTCATCTACTCCCGCAGACGAGAAACGGCAGCGCAAGAAGCTCCA
AAACCGAGTAAATCAGAGAGCACGTCGTCTCCGGCTCAAGAATGAGCAGG
GCAAAGGCCAAACCACCCGTCCATACAGCGTCCACCGCTGGCGAGTCTCA
GAATACGAGACACCATCATCATCAACCTCACCAACCAATAACCACTCACA
CACCCTTTCTCAAGCACAGAACCTCTCTCAAACACAAACACAAACAGACC
CTGAACCCTCCCTGACTTCATCATCATCATCATCATCATCATCCTCATCA
CCCTCACCCCCCTCCCTACCCACCTCCTCCACCCCAAATATATCCTCAGA
CCACCTCCTCCACCTAATAACCCACAACGTCTTCCGCGCCCTATACACCA
ACAAACTCCTCCTCTACGAGCTCTCCACAGCCCTCATTCCCGGCCCAACT
CCCCAGTCATCCATCCACCTCATCCACGAAGGCCTCACCTTCCCCATCTA
CGCCACAACCATCCCCAACTCCTACCCATCCCCTATCCCCGCATCCCTCT
TCCCCACGCCCTCCCAGCGGAATCTCATCCACTGCTCGTGGATAGATCTC
CTGCCGTTTCCGCGTATGCGCGAGAATCTGATCAAGTGGGAAGCGTGCTT
TGATCATGGCGAGTTTGTGAGGGATTTGGTGGGGGCGTATGTTATGCAGG
AGTGGGTGTTGAGGAGTGGGGAGAGTGTGGAGGGGGAAATTGAGGGGAGG
GTGGTGGTTGAGGTGGAGGGGGATGGTGATGATGAGGTTACGGGGAATAA
TAGGAACGGGTGGATTGTTTGGGGAGAGCCGCATTGTAAGGAGAGTTGGG
AGGTGACACCGGGGTTTTTGAGGAAGTGGGGGTGGGTTGTGGAAGGTATT
TGGGTATAAATGCCGTCATCTACTCCCGCAGACGAGAAACGGCAGCGCAA
GAAGCTCCAAAACCGAGTAAATCAGAGAGCACGTCGTCTCCGGCTCAAGA
ATGAGCAGGGCAAAGGCCAAACCACCCGTCCATACAGCGTCCACCGCTGG
CGAGTCTCAGAATACGAGACACCATCATCATCAACCTCACCAACCAATAA
CCACTCACACACCCTTTCTCAAGCACAGAACCTCTCTCAAACACAAACAC
AAACAGACCCTGAACCCTCCCTGACTTCATCATCATCATCATCATCATCA
TCCTCATCACCCTCACCCCCCTCCCTACCCACCTCCTCCACCCCAAATAT
ATCCTCAGACCACCTCCTCCACCTAATAACCCACAACGTCTTCCGCGCCC
TATACACCAACAAACTCCTCCTCTACGAGCTCTCCACAGCCCTCATTCCC
GGCCCAACTCCCCAGTCATCCATCCACCTCATCCACGAAGGCCTCACCTT
CCCCATCTACGCCACAACCATCCCCAACTCCTACCCATCCCCTATCCCCG
CATCCCTCTTCCCCACGCCCTCCCAGCGGAATCTCATCCACTGCTCGTGG
ATAGATCTCCTGCCGTTTCCGCGTATGCGCGAGAATCTGATCAAGTGGGA
AGCGTGCTTTGATCATGGCGAGTTTGTGAGGGATTTGGTGGGGGCGTATG
TTATGCAGGAGTGGGTGTTGAGGAGTGGGGAGAGTGTGGAGGGGGAAATT
GAGGGGAGGGTGGTGGTTGAGGTGGAGGGGGATGGTGATGATGAGGTTAC
GGGGAATAATAGGAACGGGTGGATTGTTTGGGGAGAGCCGCATTGTAAGG
AGAGTTGGGAGGTGACACCGGGGTTTTTGAGGAAGTGGGGGTGGGTTGTG
GAAGGTATTTGGGTATAAATGCCGTCATCTACTCCCGCAGACGAGAAACG
GCAGCGCAAGAAGCTCCAAAACCGAGTAAATCAGAGAGCACGTCGTCTCC
GGCTCAAGAATGAGCAGGGCAAAGGCCAAACCACCCGTCCATACAGCGTC
CACCGCTGGCGAGTCTCAGAATACGAGACACCATCATCATCAACCTCACC
AACCAATAACCACTCACACACCCTTTCTCAAGCACAGAACCTCTCTCAAA
CACAAACACAAACAGACCCTGAACCCTCCCTGACTTCATCATCATCATCA
TCATCATCATCCTCATCACCCTCACCCCCCTCCCTACCCACCTCCTCCAC
CCCAAATATATCCTCAGACCACCTCCTCCACCTAATAACCCACAACGTCT
TCCGCGCCCTATACACCAACAAACTCCTCCTCTACGAGCTCTCCACAGCC
CTCATTCCCGGCCCAACTCCCCAGTCATCCATCCACCTCATCCACGAAGG
CCTCACCTTCCCCATCTACGCCACAACCATCCCCAACTCCTACCCATCCC
CTATCCCCGCATCCCTCTTCCCCACGCCCTCCCAGCGGAATCTCATCCAC
TGCTCGTGGATAGATCTCCTGCCGTTTCCGCGTATGCGCGAGAATCTGAT
CAAGTGGGAAGCGTGCTTTGATCATGGCGAGTTTGTGAGGGATTTGGTGG
GGGCGTATGTTATGCAGGAGTGGGTGTTGAGGAGTGGGGAGAGTGTGGAG
GGGGAAATTGAGGGGAGGGTGGTGGTTGAGGTGGAGGGGGATGGTGATGA
TGAGGTTACGGGGAATAATAGGAACGGGTGGATTGTTTGGGGAGAGCCGC
ATTGTAAGGAGAGTTGGGAGGTGACACCGGGGTTTTTGAGGAAGTGGGGG
TGGGTTGTGGAAGGTATTTGGGTATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_333788M747DRAFT_333788Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333788-T1.utr5p1M747DRAFT_333788-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333788-T1.exon1M747DRAFT_333788-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_333788-T1.exon2M747DRAFT_333788-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_333788-T1.exon3M747DRAFT_333788-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333788-T1.cdsM747DRAFT_333788-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333788-T1M747DRAFT_333788-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021833
DBxrefPFAM:PF11905
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:300201..301372 +
Powered by Drupal