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M747DRAFT_333954-T1, M747DRAFT_333954-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_333954-T1
Unique NameM747DRAFT_333954-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851933.1:244908..246509-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_333954-T1 ID=M747DRAFT_333954-T1|Name=M747DRAFT_333954-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1602bp|location=Sequence derived from alignment at KZ851933.1:244908..246509- (Aspergillus niger ATCC 13496)
CTTCAAAGAACTTGTTGCCATTGCTTCTCGGGTATTCCCCCCAGGGCATT GTTCAGTTCTTATCAGCTTCTTGTCTCCGGGCTTCAGAGAATTCACCTCC TTCCCTCCGCGCATCTTCCTCAAATCATCACCTCCACCTCCTCTTCAACC ACCAAAACACCTATCTATACCCTCCCCTCTTTTCTCCCTCCACCACAATC ATGGCTCCCGGAGCCGGAAAGAGTGTCTTCCTGGGGAATATCCCCTATAG TATGTTCCCAGTCTTTGTCTTGCGTCCAGCACAACCACCCCAATGGCATC AAACTAACCCATCACTTCCCAGACCTCACGGAAGAACAAGTCAAAGACAT CCTCAGCTCCGCCGGCACAGTAACCAAATTCCGCCTGATGATGAACCCCG AGACCGGTAAACCCAAAGGTTACGGTTTCGCCGACTTTGCCGACGCCGAT GCGGCCGCCTCCGCTGTCCGCAACCTAAACGACTACGAGATCATGGGCCG CAAGATTCGGGTCGACTGGCCACACAACAATGAAAAGGACTCCATACCCC CCGACTACTCCCAGCTCTCCGCACCCACTGTCCAGGACGGCTCTCAACAG CAACAACAGCAGCAGTCCGCGCCTCTTCCTCCTCTGCCCCCGGGTGTCGA AGTTCCCCCGCATCTCGATTGCCCCAACGCCATCTCTCAGACACTCGCTT CCCTGCCCCCGAACCAGCTCCTCGATGTCCTCTCCCAGATGAAGTCGCTT GTCATGGCGGATCCCGCCAGAGCGACAGAGCTTCTACGCCAAGCTCCTCA GCTCGCCTACGCAATCTTCCAAGCGTTGCTACTCATGAACCTGGTCGATT ATGGTGCTCTCGGCTCGGTGGTGGAACAAGCGAGCCAACCTAGTGCACCA GCACCCCCTCCTGCCGCCGCGCAAGCCTTCCAACCCTTCTCCGCTGTACC GGGACCGGTGTCTACGCCTCCAATGGTCAACACTCCTTTCGCTGCTGCCG CCGCCCCGCCGCAACAACCCCCGCAGGCTATGCCAGGACAGGAAGAGCTC CTGCAGCAAGTGCTCAGTATGCCGCAGGCTGCGATCGATGCGCTCCCACC CATGGAGCGCAGCCAGATCATGCTCCTTCGGCAGCAGTTGATGCAGGGTG CTATGCGGTGATTGAATATCACCTCTTATCTACTCCTCTGAAACTATTTT ATACCCCCTCCCTCCCTCTCCCTCTTATCTCCCGAATGAGGAACAAAAGG AACCGGGCGCAAAGCAGCATCAGGCGGCACATCTGACGCAGAATGCCTCG GCACGAACAACCGAATTTGTTCTACAACCCTTTCATCTCTCCATCTTGAT GTTAGCAACGTCATAGCTTTCATTGATTGACTGATTGATCAACAACCGGA ACCGGGTGTGAGTTTTGGCGCAATACGGGCATGTTGGTGGGGTTTCAAAT TTGCGGGTTTTCTTCTATTGGGTTGTGAGATACGGACTGGACTGGGAGAC CATCGCCTTATTGCTCTCCCTTTCCTCTCCCTTTCTTTTTCTCGTTCTCA AAGTTCCGGAATGTACATGATAGTATAGCAGCAGCTGTAGCGGATATCCC AG
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Coding sequence (CDS) from alignment at KZ851933.1:244908..246509-

>M747DRAFT_333954-T1 ID=M747DRAFT_333954-T1|Name=M747DRAFT_333954-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1776bp|location=Sequence derived from alignment at KZ851933.1:244908..246509- (Aspergillus niger ATCC 13496)
ACCTCACGGAAGAACAAGTCAAAGACATCCTCAGCTCCGCCGGCACAGTA
ACCAAATTCCGCCTGATGATGAACCCCGAGACCGGTAAACCCAAAGGTTA
CGGTTTCGCCGACTTTGCCGACGCCGATGCGGCCGCCTCCGCTGTCCGCA
ACCTAAACGACTACGAGATCATGGGCCGCAAGATTCGGGTCGACTGGCCA
CACAACAATGAAAAGGACTCCATACCCCCCGACTACTCCCAGCTCTCCGC
ACCCACTGTCCAGGACGGCTCTCAACAGCAACAACAGCAGCAGTCCGCGC
CTCTTCCTCCTCTGCCCCCGGGTGTCGAAGTTCCCCCGCATCTCGATTGC
CCCAACGCCATCTCTCAGACACTCGCTTCCCTGCCCCCGAACCAGCTCCT
CGATGTCCTCTCCCAGATGAAGTCGCTTGTCATGGCGGATCCCGCCAGAG
CGACAGAGCTTCTACGCCAAGCTCCTCAGCTCGCCTACGCAATCTTCCAA
GCGTTGCTACTCATGAACCTGGTCGATTATGGTGCTCTCGGCTCGGTGGT
GGAACAAGCGAGCCAACCTAGTGCACCAGCACCCCCTCCTGCCGCCGCGC
AAGCCTTCCAACCCTTCTCCGCTGTACCGGGACCGGTGTCTACGCCTCCA
ATGGTCAACACTCCTTTCGCTGCTGCCGCCGCCCCGCCGCAACAACCCCC
GCAGGCTATGCCAGGACAGGAAGAGCTCCTGCAGCAAGTGCTCAGTATGC
CGCAGGCTGCGATCGATGCGCTCCCACCCATGGAGCGCAGCCAGATCATG
CTCCTTCGGCAGCAGTTGATGCAGGGTGCTATGCGGTGAATGGCTCCCGG
AGCCGGAAAGAGTGTCTTCCTGGGGAATATCCCCTATAACCTCACGGAAG
AACAAGTCAAAGACATCCTCAGCTCCGCCGGCACAGTAACCAAATTCCGC
CTGATGATGAACCCCGAGACCGGTAAACCCAAAGGTTACGGTTTCGCCGA
CTTTGCCGACGCCGATGCGGCCGCCTCCGCTGTCCGCAACCTAAACGACT
ACGAGATCATGGGCCGCAAGATTCGGGTCGACTGGCCACACAACAATGAA
AAGGACTCCATACCCCCCGACTACTCCCAGCTCTCCGCACCCACTGTCCA
GGACGGCTCTCAACAGCAACAACAGCAGCAGTCCGCGCCTCTTCCTCCTC
TGCCCCCGGGTGTCGAAGTTCCCCCGCATCTCGATTGCCCCAACGCCATC
TCTCAGACACTCGCTTCCCTGCCCCCGAACCAGCTCCTCGATGTCCTCTC
CCAGATGAAGTCGCTTGTCATGGCGGATCCCGCCAGAGCGACAGAGCTTC
TACGCCAAGCTCCTCAGCTCGCCTACGCAATCTTCCAAGCGTTGCTACTC
ATGAACCTGGTCGATTATGGTGCTCTCGGCTCGGTGGTGGAACAAGCGAG
CCAACCTAGTGCACCAGCACCCCCTCCTGCCGCCGCGCAAGCCTTCCAAC
CCTTCTCCGCTGTACCGGGACCGGTGTCTACGCCTCCAATGGTCAACACT
CCTTTCGCTGCTGCCGCCGCCCCGCCGCAACAACCCCCGCAGGCTATGCC
AGGACAGGAAGAGCTCCTGCAGCAAGTGCTCAGTATGCCGCAGGCTGCGA
TCGATGCGCTCCCACCCATGGAGCGCAGCCAGATCATGCTCCTTCGGCAG
CAGTTGATGCAGGGTGCTATGCGGTGAATGGCTCCCGGAGCCGGAAAGAG
TGTCTTCCTGGGGAATATCCCCTATA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0031124mRNA 3'-end processing
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_333954M747DRAFT_333954Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333954-T1M747DRAFT_333954-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333954-T1.cdsM747DRAFT_333954-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333954-T1.utr3p1M747DRAFT_333954-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333954-T1.exon2M747DRAFT_333954-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_333954-T1.exon1M747DRAFT_333954-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333954-T1.utr5p1M747DRAFT_333954-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR038192
DBxrefInterPro:IPR026896
DBxrefInterPro:IPR025742
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF14304
DBxrefPFAM:PF14327
Productputative polyadenylation factor subunit CstF64
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851933.1supercontigKZ851933.1:244908..246509 -