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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851933.1:244908..246509- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_333954-T1 ID=M747DRAFT_333954-T1|Name=M747DRAFT_333954-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1602bp|location=Sequence derived from alignment at KZ851933.1:244908..246509- (Aspergillus niger ATCC 13496)
CTTCAAAGAACTTGTTGCCATTGCTTCTCGGGTATTCCCCCCAGGGCATT
GTTCAGTTCTTATCAGCTTCTTGTCTCCGGGCTTCAGAGAATTCACCTCC
TTCCCTCCGCGCATCTTCCTCAAATCATCACCTCCACCTCCTCTTCAACC
ACCAAAACACCTATCTATACCCTCCCCTCTTTTCTCCCTCCACCACAATC
ATGGCTCCCGGAGCCGGAAAGAGTGTCTTCCTGGGGAATATCCCCTATAG
TATGTTCCCAGTCTTTGTCTTGCGTCCAGCACAACCACCCCAATGGCATC
AAACTAACCCATCACTTCCCAGACCTCACGGAAGAACAAGTCAAAGACAT
CCTCAGCTCCGCCGGCACAGTAACCAAATTCCGCCTGATGATGAACCCCG
AGACCGGTAAACCCAAAGGTTACGGTTTCGCCGACTTTGCCGACGCCGAT
GCGGCCGCCTCCGCTGTCCGCAACCTAAACGACTACGAGATCATGGGCCG
CAAGATTCGGGTCGACTGGCCACACAACAATGAAAAGGACTCCATACCCC
CCGACTACTCCCAGCTCTCCGCACCCACTGTCCAGGACGGCTCTCAACAG
CAACAACAGCAGCAGTCCGCGCCTCTTCCTCCTCTGCCCCCGGGTGTCGA
AGTTCCCCCGCATCTCGATTGCCCCAACGCCATCTCTCAGACACTCGCTT
CCCTGCCCCCGAACCAGCTCCTCGATGTCCTCTCCCAGATGAAGTCGCTT
GTCATGGCGGATCCCGCCAGAGCGACAGAGCTTCTACGCCAAGCTCCTCA
GCTCGCCTACGCAATCTTCCAAGCGTTGCTACTCATGAACCTGGTCGATT
ATGGTGCTCTCGGCTCGGTGGTGGAACAAGCGAGCCAACCTAGTGCACCA
GCACCCCCTCCTGCCGCCGCGCAAGCCTTCCAACCCTTCTCCGCTGTACC
GGGACCGGTGTCTACGCCTCCAATGGTCAACACTCCTTTCGCTGCTGCCG
CCGCCCCGCCGCAACAACCCCCGCAGGCTATGCCAGGACAGGAAGAGCTC
CTGCAGCAAGTGCTCAGTATGCCGCAGGCTGCGATCGATGCGCTCCCACC
CATGGAGCGCAGCCAGATCATGCTCCTTCGGCAGCAGTTGATGCAGGGTG
CTATGCGGTGATTGAATATCACCTCTTATCTACTCCTCTGAAACTATTTT
ATACCCCCTCCCTCCCTCTCCCTCTTATCTCCCGAATGAGGAACAAAAGG
AACCGGGCGCAAAGCAGCATCAGGCGGCACATCTGACGCAGAATGCCTCG
GCACGAACAACCGAATTTGTTCTACAACCCTTTCATCTCTCCATCTTGAT
GTTAGCAACGTCATAGCTTTCATTGATTGACTGATTGATCAACAACCGGA
ACCGGGTGTGAGTTTTGGCGCAATACGGGCATGTTGGTGGGGTTTCAAAT
TTGCGGGTTTTCTTCTATTGGGTTGTGAGATACGGACTGGACTGGGAGAC
CATCGCCTTATTGCTCTCCCTTTCCTCTCCCTTTCTTTTTCTCGTTCTCA
AAGTTCCGGAATGTACATGATAGTATAGCAGCAGCTGTAGCGGATATCCC
AG back to topCoding sequence (CDS) from alignment at KZ851933.1:244908..246509- >M747DRAFT_333954-T1 ID=M747DRAFT_333954-T1|Name=M747DRAFT_333954-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1776bp|location=Sequence derived from alignment at KZ851933.1:244908..246509- (Aspergillus niger ATCC 13496)
ACCTCACGGAAGAACAAGTCAAAGACATCCTCAGCTCCGCCGGCACAGTA
ACCAAATTCCGCCTGATGATGAACCCCGAGACCGGTAAACCCAAAGGTTA
CGGTTTCGCCGACTTTGCCGACGCCGATGCGGCCGCCTCCGCTGTCCGCA
ACCTAAACGACTACGAGATCATGGGCCGCAAGATTCGGGTCGACTGGCCA
CACAACAATGAAAAGGACTCCATACCCCCCGACTACTCCCAGCTCTCCGC
ACCCACTGTCCAGGACGGCTCTCAACAGCAACAACAGCAGCAGTCCGCGC
CTCTTCCTCCTCTGCCCCCGGGTGTCGAAGTTCCCCCGCATCTCGATTGC
CCCAACGCCATCTCTCAGACACTCGCTTCCCTGCCCCCGAACCAGCTCCT
CGATGTCCTCTCCCAGATGAAGTCGCTTGTCATGGCGGATCCCGCCAGAG
CGACAGAGCTTCTACGCCAAGCTCCTCAGCTCGCCTACGCAATCTTCCAA
GCGTTGCTACTCATGAACCTGGTCGATTATGGTGCTCTCGGCTCGGTGGT
GGAACAAGCGAGCCAACCTAGTGCACCAGCACCCCCTCCTGCCGCCGCGC
AAGCCTTCCAACCCTTCTCCGCTGTACCGGGACCGGTGTCTACGCCTCCA
ATGGTCAACACTCCTTTCGCTGCTGCCGCCGCCCCGCCGCAACAACCCCC
GCAGGCTATGCCAGGACAGGAAGAGCTCCTGCAGCAAGTGCTCAGTATGC
CGCAGGCTGCGATCGATGCGCTCCCACCCATGGAGCGCAGCCAGATCATG
CTCCTTCGGCAGCAGTTGATGCAGGGTGCTATGCGGTGAATGGCTCCCGG
AGCCGGAAAGAGTGTCTTCCTGGGGAATATCCCCTATAACCTCACGGAAG
AACAAGTCAAAGACATCCTCAGCTCCGCCGGCACAGTAACCAAATTCCGC
CTGATGATGAACCCCGAGACCGGTAAACCCAAAGGTTACGGTTTCGCCGA
CTTTGCCGACGCCGATGCGGCCGCCTCCGCTGTCCGCAACCTAAACGACT
ACGAGATCATGGGCCGCAAGATTCGGGTCGACTGGCCACACAACAATGAA
AAGGACTCCATACCCCCCGACTACTCCCAGCTCTCCGCACCCACTGTCCA
GGACGGCTCTCAACAGCAACAACAGCAGCAGTCCGCGCCTCTTCCTCCTC
TGCCCCCGGGTGTCGAAGTTCCCCCGCATCTCGATTGCCCCAACGCCATC
TCTCAGACACTCGCTTCCCTGCCCCCGAACCAGCTCCTCGATGTCCTCTC
CCAGATGAAGTCGCTTGTCATGGCGGATCCCGCCAGAGCGACAGAGCTTC
TACGCCAAGCTCCTCAGCTCGCCTACGCAATCTTCCAAGCGTTGCTACTC
ATGAACCTGGTCGATTATGGTGCTCTCGGCTCGGTGGTGGAACAAGCGAG
CCAACCTAGTGCACCAGCACCCCCTCCTGCCGCCGCGCAAGCCTTCCAAC
CCTTCTCCGCTGTACCGGGACCGGTGTCTACGCCTCCAATGGTCAACACT
CCTTTCGCTGCTGCCGCCGCCCCGCCGCAACAACCCCCGCAGGCTATGCC
AGGACAGGAAGAGCTCCTGCAGCAAGTGCTCAGTATGCCGCAGGCTGCGA
TCGATGCGCTCCCACCCATGGAGCGCAGCCAGATCATGCTCCTTCGGCAG
CAGTTGATGCAGGGTGCTATGCGGTGAATGGCTCCCGGAGCCGGAAAGAG
TGTCTTCCTGGGGAATATCCCCTATA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0031124 | mRNA 3'-end processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR038192 |
| DBxref | InterPro:IPR026896 |
| DBxref | InterPro:IPR025742 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF14304 |
| DBxref | PFAM:PF14327 |
| Product | putative polyadenylation factor subunit CstF64 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851933.1 | supercontig | KZ851933.1:244908..246509 - |
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