You are here

Home

M747DRAFT_334247-T1, M747DRAFT_334247-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_334247-T1
Unique NameM747DRAFT_334247-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851936.1:273469..274868+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_334247-T1 ID=M747DRAFT_334247-T1|Name=M747DRAFT_334247-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1400bp|location=Sequence derived from alignment at KZ851936.1:273469..274868+ (Aspergillus niger ATCC 13496)
TTCTACTGTAACCAGCCCATTCTCCAGGCAGTCCTCTTTGGCTGTCCTCT
GCCACACCCCTCGGCTGCGGCATAACATTCTCGTTCGGACCCAACATGCG
CCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGCCTCGG
CCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGTATCCG
TGCTGCTACAGTAAGCACAACATGCCTCGTAATTCGCACATGTTCTGACA
TATCATCTTCAAGGCGGACAATGTGGTGTAGGAACCTACTGCCTGGGAGG
TTGCAACCCTCTTGAATCGTACTCGCTCGACAGCTGCACGCCCGAGCCAA
TTTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGGTCCTG
TACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTACAGCGG
CTACCCCAAGATCAAGAATGAGAGTCTGTGGTTGACGATGCCCAACGGCA
CGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCAAGATC
TCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGTTTCAT
TCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGGATACA
ATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGAACTGT
ATGTTCCGCAGATCAGTCTTATGCACCTAAACTAACAATTCTAGATACCA
ATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTTGACGAATGGCAT
ACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTGGCTCATCGATGG
CACTGTGATGCGCACCCTGACCAAGAACTCTACCTACAACGCCACCTCGG
GTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAGATGTCTATCTGG
CCCGGTGGCTCGGAGGCCGAGGGACAGGGTACCATTGAATGGGCCGGCGG
TCTCATCGACTGGGACAGCACGGATATCAAGGAGTACGGCTACTTCTATG
CGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCCCCGTCTGGCACC
ATCGACAAAGGTGACACATCCTACGTGTACACGAGCGACAGCGGTCTCTC
GGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTTACAACCTGCAGG
ATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCTGATTCTGCCACG
GCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGGCAGCAGCAGCAG
CAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGCGCGTGATGGAGG
GATCGGTGCTTGCGGCCGTTGGTGCCGTTGTTGCACTGGGTCTGTTTTAG
back to top

Coding sequence (CDS) from alignment at KZ851936.1:273469..274868+

>M747DRAFT_334247-T1 ID=M747DRAFT_334247-T1|Name=M747DRAFT_334247-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3618bp|location=Sequence derived from alignment at KZ851936.1:273469..274868+ (Aspergillus niger ATCC 13496)
ATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGC
CTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGT
ATCCGTGCTGCTACAGCGGACAATGTGGTGTAGGAACCTACTGCCTGGGA
GGTTGCAACCCTCTTGAATCGTACTCGCTCGACAGCTGCACGCCCGAGCC
AATTTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGGTCC
TGTACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTACAGC
GGCTACCCCAAGATCAAGAATGAGAGTCTGTGGTTGACGATGCCCAACGG
CACGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCAAGA
TCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGTTTC
ATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGGATA
CAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGAACT
ATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTTGACGAA
TGGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTGGCTCAT
CGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACAACGCCA
CCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAGATGTCT
ATCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTACCATTGAATGGGC
CGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACGGCTACT
TCTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCCCCGTCT
GGCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGACAGCGG
TCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTTACAACC
TGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCTGATTCT
GCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGGCAGCAG
CAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGCGCGTGA
TGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTTGCACTGGGTCTG
TTTTAGATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGC
CACCGCCTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGG
AAGAGTATCCGTGCTGCTACAGCGGACAATGTGGTGTAGGAACCTACTGC
CTGGGAGGTTGCAACCCTCTTGAATCGTACTCGCTCGACAGCTGCACGCC
CGAGCCAATTTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATG
CGGTCCTGTACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTG
TACAGCGGCTACCCCAAGATCAAGAATGAGAGTCTGTGGTTGACGATGCC
CAACGGCACGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACG
GCAAGATCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACG
GGTTTCATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGT
TGGATACAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGG
AGAACTATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTT
GACGAATGGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTG
GCTCATCGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACA
ACGCCACCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAG
ATGTCTATCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTACCATTGA
ATGGGCCGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACG
GCTACTTCTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCC
CCGTCTGGCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGA
CAGCGGTCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTT
ACAACCTGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCT
GATTCTGCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGG
CAGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGC
GCGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTTGCACTG
GGTCTGTTTTAGATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGC
TGCGGCCACCGCCTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGT
GTCCGGAAGAGTATCCGTGCTGCTACAGCGGACAATGTGGTGTAGGAACC
TACTGCCTGGGAGGTTGCAACCCTCTTGAATCGTACTCGCTCGACAGCTG
CACGCCCGAGCCAATTTGCAAGAATCAGACCTACACGTTTACGAACATGG
ACAATGCGGTCCTGTACGACCACTACCTTGGTAACGCCTCCGAATACGAT
TGGGTGTACAGCGGCTACCCCAAGATCAAGAATGAGAGTCTGTGGTTGAC
GATGCCCAACGGCACGACGGGCAGTCTGTACTCCCTCAATCATTACATCT
GGTACGGCAAGATCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTT
GTGACGGGTTTCATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGA
ATGGGTTGGATACAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGG
GCGTGGAGAACTATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAAC
ACCTTTGACGAATGGCATACCTACACGATCGACTGGAAGCCCGATGTGCT
GGAGTGGCTCATCGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTA
CCTACAACGCCACCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGG
CTGGAGATGTCTATCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTAC
CATTGAATGGGCCGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGG
AGTACGGCTACTTCTATGCGCAATACAAGGACATCACGGTCGAGTGCTAC
CCTGCCCCGTCTGGCACCATCGACAAAGGTGACACATCCTACGTGTACAC
GAGCGACAGCGGTCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCG
TGCTTTACAACCTGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAG
ATGTCTGATTCTGCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCAC
CGGCGGCAGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATG
GTGAGCGCGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTT
GCACTGGGTCTGTTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071555cell wall organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_334247M747DRAFT_334247Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334247-T1.utr5p1M747DRAFT_334247-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334247-T1.exon1M747DRAFT_334247-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_334247-T1.exon2M747DRAFT_334247-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_334247-T1.exon3M747DRAFT_334247-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334247-T1.cdsM747DRAFT_334247-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334247-T1M747DRAFT_334247-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
DBxrefInterPro:IPR017168
DBxrefPFAM:PF00722
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851936.1supercontigKZ851936.1:273469..274868 +
Powered by Drupal