You are here

Home

M747DRAFT_334376-T1, M747DRAFT_334376-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_334376-T1
Unique NameM747DRAFT_334376-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851938.1:164774..166094+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_334376-T1 ID=M747DRAFT_334376-T1|Name=M747DRAFT_334376-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1321bp|location=Sequence derived from alignment at KZ851938.1:164774..166094+ (Aspergillus niger ATCC 13496)
ATGAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGG
GTCAAACGGGACTACTACTTTGCCCGTCGTCGTTGACACTCGACGGCCGT
CTGGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAG
AGCTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCG
TCTAGCACAACGGGCATACCGTGAGTACATCCTCTACTCGTGGTTCGCGA
ATAGCATCGCTGACGCTGTCTACAAGGCCGAAACATGCGCGACCGCACCA
AAGAGGTCGAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATC
AACAGCAACAGCTCCACCCCCAACGACAGCAACAGCGGCAGCATCAGCGC
GAGCGCGAGTACCAGCGACGTGGACGACCGTCCCACGCGAGCCTCGTCGC
AAGTCAGTACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCACA
TATTTCCCATCCCCAGACCAGGAGATGCTAGGCAATGGACTGAGCTGGCC
GACGGACCTGGACCACGACTTCAGCAACTGCTTCGATAAAACGAAAGACG
TTACAGCGGCTGTCACGAGCATGCCGACCTCCGTGTCACCTTCGGCGATG
GCCGCAACAGCGAGCGCCCAGAACGCGATGCGATGGCTGGAGTCTGATGT
CTACTATCCTTTTCCGCCGTCGCCGCCCAACGTCGACCCCATGCTGCGCT
CCGTGCCGAGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGT
TCCTTGTCCAGCCGTGATCCCGAGGCGGACGAACCCTTGATCCACATCGC
CATTTCGCGCGGCACAATTGACACTCTTCAATTGTTGCTCATGACCTACC
CCATCTCGGTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGA
GCTGTCATCACTGGAAGGACAGACATGATGAAACTGCTCATTGAACATGG
TGCCGACGCGGGGCTATGACGTATCTACATGGACGCGTGCATTAAAATCC
GAACGAAAACACAAAACCCGAACCAATTATTGCAGAGGGGCTTGGTTGGT
TACCTCAAGAAGGGGCCGAATTCCTGGGCTGTGACAGGAACCGGCCGACC
GCCAAGTTCCCCACTGATCGCTATGATTCCATATGTCTATATTTCTTTTC
CTTTCTTTTGTGTTCTTTGTACACATCACTTGTCTTGGTGTCATCTTTGG
GGTCAATTGGCGAAGGCGTCCTCCGGTTTGATTTCTAGCGGCAGATCTGA
TTGATTAGACTACAAATACCC
back to top

Coding sequence (CDS) from alignment at KZ851938.1:164774..166094+

>M747DRAFT_334376-T1 ID=M747DRAFT_334376-T1|Name=M747DRAFT_334376-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2997bp|location=Sequence derived from alignment at KZ851938.1:164774..166094+ (Aspergillus niger ATCC 13496)
ATGAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGG
GTCAAACGGGACTACTACTTTGCCCGTCGTCGTTGACACTCGACGGCCGT
CTGGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAG
AGCTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCG
TCTAGCACAACGGGCATACCGCCGAAACATGCGCGACCGCACCAAAGAGG
TCGAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATCAACAGC
AACAGCTCCACCCCCAACGACAGCAACAGCGGCAGCATCAGCGCGAGCGC
GAGTACCAGCGACGTGGACGACCGTCCCACGCGAGCCTCGTCGCAAGTCA
GTACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCACATATTTC
CCATCCCCAGACCAGGAGATGCTAGGCAATGGACTGAGCTGGCCGACGGA
CCTGGACCACGACTTCAGCAACTGCTTCGATAAAACGAAAGACGTTACAG
CGGCTGTCACGAGCATGCCGACCTCCGTGTCACCTTCGGCGATGGCCGCA
ACAGCGAGCGCCCAGAACGCGATGCGATGGCTGGAGTCTGATGTCTACTA
TCCTTTTCCGCCGTCGCCGCCCAACGTCGACCCCATGCTGCGCTCCGTGC
CGAGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGTTCCTTG
TCCAGCCGTGATCCCGAGGCGGACGAACCCTTGATCCACATCGCCATTTC
GCGCGGCACAATTGACACTCTTCAATTGTTGCTCATGACCTACCCCATCT
CGGTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGAGCTGTC
ATCACTGGAAGGACAGACATGATGAAACTGCTCATTGAACATGGTGCCGA
CGCGGGGCTATGGGTTACCTCAAGAAGGGGCCGAATTCCTGGGCTGTGAA
TGAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGGG
TCAAACGGGACTACTACTTTGCCCGTCGTCGTTGACACTCGACGGCCGTC
TGGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAGA
GCTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCGT
CTAGCACAACGGGCATACCGCCGAAACATGCGCGACCGCACCAAAGAGGT
CGAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATCAACAGCA
ACAGCTCCACCCCCAACGACAGCAACAGCGGCAGCATCAGCGCGAGCGCG
AGTACCAGCGACGTGGACGACCGTCCCACGCGAGCCTCGTCGCAAGTCAG
TACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCACATATTTCC
CATCCCCAGACCAGGAGATGCTAGGCAATGGACTGAGCTGGCCGACGGAC
CTGGACCACGACTTCAGCAACTGCTTCGATAAAACGAAAGACGTTACAGC
GGCTGTCACGAGCATGCCGACCTCCGTGTCACCTTCGGCGATGGCCGCAA
CAGCGAGCGCCCAGAACGCGATGCGATGGCTGGAGTCTGATGTCTACTAT
CCTTTTCCGCCGTCGCCGCCCAACGTCGACCCCATGCTGCGCTCCGTGCC
GAGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGTTCCTTGT
CCAGCCGTGATCCCGAGGCGGACGAACCCTTGATCCACATCGCCATTTCG
CGCGGCACAATTGACACTCTTCAATTGTTGCTCATGACCTACCCCATCTC
GGTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGAGCTGTCA
TCACTGGAAGGACAGACATGATGAAACTGCTCATTGAACATGGTGCCGAC
GCGGGGCTATGGGTTACCTCAAGAAGGGGCCGAATTCCTGGGCTGTGAAT
GAATCAAATACAGCAGCAGCAACAGCAACAGCAACACCCTCTGGTAGGGT
CAAACGGGACTACTACTTTGCCCGTCGTCGTTGACACTCGACGGCCGTCT
GGACGTCCCAAACATAATTCATACACCGACTTGATGAAGCCAGGCGAGAG
CTGGGAGGATCTCCCGGATGCCGCAGAGCGGAGGAGAATTCAGAACCGTC
TAGCACAACGGGCATACCGCCGAAACATGCGCGACCGCACCAAAGAGGTC
GAGCTCCTCAAAAGTCAAGTCAAAAACCTTCAAGAAGCCATCAACAGCAA
CAGCTCCACCCCCAACGACAGCAACAGCGGCAGCATCAGCGCGAGCGCGA
GTACCAGCGACGTGGACGACCGTCCCACGCGAGCCTCGTCGCAAGTCAGT
ACTAGCAGTGTCTCTCCTGGACCCCGCGAAGCTCCGAGCACATATTTCCC
ATCCCCAGACCAGGAGATGCTAGGCAATGGACTGAGCTGGCCGACGGACC
TGGACCACGACTTCAGCAACTGCTTCGATAAAACGAAAGACGTTACAGCG
GCTGTCACGAGCATGCCGACCTCCGTGTCACCTTCGGCGATGGCCGCAAC
AGCGAGCGCCCAGAACGCGATGCGATGGCTGGAGTCTGATGTCTACTATC
CTTTTCCGCCGTCGCCGCCCAACGTCGACCCCATGCTGCGCTCCGTGCCG
AGCACCATCTCCGACACACATCAACGGATCGCCTCAGGGTGTTCCTTGTC
CAGCCGTGATCCCGAGGCGGACGAACCCTTGATCCACATCGCCATTTCGC
GCGGCACAATTGACACTCTTCAATTGTTGCTCATGACCTACCCCATCTCG
GTGAATGTCCGTGACCGGGCGGGCTACACGCCGCTCCAACGAGCTGTCAT
CACTGGAAGGACAGACATGATGAAACTGCTCATTGAACATGGTGCCGACG
CGGGGCTATGGGTTACCTCAAGAAGGGGCCGAATTCCTGGGCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_334376M747DRAFT_334376Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334376-T1.exon1M747DRAFT_334376-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_334376-T1.exon2M747DRAFT_334376-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_334376-T1.exon3M747DRAFT_334376-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334376-T1.cdsM747DRAFT_334376-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334376-T1.utr3p1M747DRAFT_334376-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334376-T1M747DRAFT_334376-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519381.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851938.1supercontigKZ851938.1:164774..166094 +
Powered by Drupal