You are here

Home

M747DRAFT_334450-T1, M747DRAFT_334450-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_334450-T1
Unique NameM747DRAFT_334450-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851939.1:204660..206210-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_334450-T1 ID=M747DRAFT_334450-T1|Name=M747DRAFT_334450-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1551bp|location=Sequence derived from alignment at KZ851939.1:204660..206210- (Aspergillus niger ATCC 13496)
CCGAAAACAACCCGACTCATTGCTTGCTCCACATGCACTTCTTTGACTTA
CCTCAAGAGCTTCTGGAAGCTATCTTGGCACAAGCCTCGCGTGGCTCTCT
CGCCAGCCTCGCGCGGGTTTGCCAACGCCTCCGACCGCTCGCCGAGCGCA
TCCTGTACCAGTCGGTGTACTTGCGAAATCACGACGGAGAAAAGTTCACC
TACGCACTGGACTGTGTGCCAGCTCGCGCCGAGTATGTTAGAGAGCTGAT
AGTTCACTACCATTATGTCGATGTTGAAGATGAAGAGGAGTATTATCCCT
TGTATGCAGAAACCCTCTCCCCGACGATCGGGCGTCTCGTAAATCTGCGA
ACACTTGTCATCAAGGGGCTCGAGTTCGACGCGGACCGAGAAGAGGACGA
TGAAATCATTGGGGGGTATGAGAGAGTCATCGCAGAAGCCGAGAAATGGG
ACACACTTTTTGCGCAATCTGCTGTGCCGGGCTCGCAGATCCTTCCCTCT
CTTACAAAATGTCTGCCAATAATCTTCATTGTTCTCTTACCTCATATGCT
AATATTTCTCAGGTATGATGATCATGGACGACATCGCGCCCAATCAACCA
GCGTGGGACTTTAGTCTGAGGGGCGCCGTGCTAATCCATCCGTGCCTCCA
AGACCTGACCATCGTCGGGGGCGAAATTGAGAGCCTGAAGAATCATGTGC
CTTCACCACGATCAACGCCCCTCGAGAGGCTAAGCCTGTTCGGCTGCGAT
GTGTCCCCCTCTGCGATGGGCGAGATGTTGTCGCTGCCACGTGCCTTGAA
ACATTTGACGTATAAAGGGGCTCCATGGTGTTACAGGCCCACAAATCTTA
TGCCGAACCGGCAAATATACGTCGACAAGATAAAGGCACAAGCGGATTCG
CTTCTGAGTCTTGACATTGACTTCTATCCAGGGGTTGTTGACAATCCCCC
GGTAGACTTCACCGCCCTCCAGTGCCTGGAACAACTTACCGTCGAATCAG
ATGCATTGAGAGGAACTGGAGAATACGACCCGAAGAACAACAGCAAACTA
TGCCTCTGGAAAAGCCCCGAGCTAAAATGTCAGCTTCCTCCAAGCCTCAA
GCATCTAGTGCTGTTCCTATACTGCCCGAAGAACCCGCCAGATTGGCGTA
CTCTAATTATACTCTACAACTGGATTTCGCGGGGAAGTTTGCCGAACCTG
GAAAAGGTCACGTTCCAGATAGCAAAACCGTGTGGGCAAGAGATACTGGA
CCGTTCGATCGGAGGAAATGAAATGTCGATTGGTCAGGCTTTTGGAGAGG
TCAAAGTGCAATTGCAGTTCGAGCTGGTCCCTAACAGCAACAACGACGGC
TACGAGCTTTTCGACTGCCCTGAATGCGGCGTAAATTGGCGAAACATGCA
TGCTTGACCTGACCCTTGTTTTATGCTCAAGGAATGGTCGCAGTATTTCT
AAAGAGACATCTGTCAAGCGTTTGATATATTACTCGCAATATACTAGAAT
CGAATACATGTCGCACATCATAGTGGAGCAGTAGTTACACATATTTTCCA
G
back to top

Coding sequence (CDS) from alignment at KZ851939.1:204660..206210-

>M747DRAFT_334450-T1 ID=M747DRAFT_334450-T1|Name=M747DRAFT_334450-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2646bp|location=Sequence derived from alignment at KZ851939.1:204660..206210- (Aspergillus niger ATCC 13496)
GTATGATGATCATGGACGACATCGCGCCCAATCAACCAGCGTGGGACTTT
AGTCTGAGGGGCGCCGTGCTAATCCATCCGTGCCTCCAAGACCTGACCAT
CGTCGGGGGCGAAATTGAGAGCCTGAAGAATCATGTGCCTTCACCACGAT
CAACGCCCCTCGAGAGGCTAAGCCTGTTCGGCTGCGATGTGTCCCCCTCT
GCGATGGGCGAGATGTTGTCGCTGCCACGTGCCTTGAAACATTTGACGTA
TAAAGGGGCTCCATGGTGTTACAGGCCCACAAATCTTATGCCGAACCGGC
AAATATACGTCGACAAGATAAAGGCACAAGCGGATTCGCTTCTGAGTCTT
GACATTGACTTCTATCCAGGGGTTGTTGACAATCCCCCGGTAGACTTCAC
CGCCCTCCAGTGCCTGGAACAACTTACCGTCGAATCAGATGCATTGAGAG
GAACTGGAGAATACGACCCGAAGAACAACAGCAAACTATGCCTCTGGAAA
AGCCCCGAGCTAAAATGTCAGCTTCCTCCAAGCCTCAAGCATCTAGTGCT
GTTCCTATACTGCCCGAAGAACCCGCCAGATTGGCGTACTCTAATTATAC
TCTACAACTGGATTTCGCGGGGAAGTTTGCCGAACCTGGAAAAGGTCACG
TTCCAGATAGCAAAACCGTGTGGGCAAGAGATACTGGACCGTTCGATCGG
AGGAAATGAAATGTCGATTGGTCAGGCTTTTGGAGAGGTCAAAGTGCAAT
TGCAGTTCGAGCTGGTCCCTAACAGCAACAACGACGGCTACGAGCTTTTC
GACTGCCCTGAATGCGGCGTAAATTGGCGAAACATGCATGCTTGAATGCA
CTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACAAGCCT
CGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTCCGACCG
CTCGCCGAGCGCATCCTGTACCAGTCGGTGTACTTGCGAAATCACGACGG
AGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCCGAGTATG
TTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATGAAGAG
GAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGGCGTCT
CGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGACGCGGACC
GAGAAGAGGACGATGAAATCATTGGGGGGTATGAGAGAGTCATCGCAGAA
GCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGCTCGCA
GATCCTTCCCTCTCTTACAAAATGTATGATGATCATGGACGACATCGCGC
CCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCTAATCCAT
CCGTGCCTCCAAGACCTGACCATCGTCGGGGGCGAAATTGAGAGCCTGAA
GAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTAAGCCTGT
TCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTCGCTGCCA
CGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTTACAGGCC
CACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATAAAGGCAC
AAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGGGGTTGTT
GACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAACAACTTAC
CGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCGAAGAACA
ACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCAGCTTCCT
CCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGAACCCGCC
AGATTGGCGTACTCTAATTATACTCTACAACTGGATTTCGCGGGGAAGTT
TGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTGTGGGCAA
GAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTGGTCAGGC
TTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCTAACAGCA
ACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGTAAATTGG
CGAAACATGCATGCTTGAATGCACTTCTTTGACTTACCTCAAGAGCTTCT
GGAAGCTATCTTGGCACAAGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGC
GGGTTTGCCAACGCCTCCGACCGCTCGCCGAGCGCATCCTGTACCAGTCG
GTGTACTTGCGAAATCACGACGGAGAAAAGTTCACCTACGCACTGGACTG
TGTGCCAGCTCGCGCCGAGTATGTTAGAGAGCTGATAGTTCACTACCATT
ATGTCGATGTTGAAGATGAAGAGGAGTATTATCCCTTGTATGCAGAAACC
CTCTCCCCGACGATCGGGCGTCTCGTAAATCTGCGAACACTTGTCATCAA
GGGGCTCGAGTTCGACGCGGACCGAGAAGAGGACGATGAAATCATTGGGG
GGTATGAGAGAGTCATCGCAGAAGCCGAGAAATGGGACACACTTTTTGCG
CAATCTGCTGTGCCGGGCTCGCAGATCCTTCCCTCTCTTACAAAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_334450M747DRAFT_334450Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334450-T1M747DRAFT_334450-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334450-T1.cdsM747DRAFT_334450-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334450-T1.utr3p1M747DRAFT_334450-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334450-T1.exon2M747DRAFT_334450-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_334450-T1.exon1M747DRAFT_334450-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334450-T1.utr5p1M747DRAFT_334450-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851939.1supercontigKZ851939.1:204660..206210 -
Powered by Drupal