You are here

Home

M747DRAFT_334813-T1, M747DRAFT_334813-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_334813-T1
Unique NameM747DRAFT_334813-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:90017..91158+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_334813-T1 ID=M747DRAFT_334813-T1|Name=M747DRAFT_334813-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1142bp|location=Sequence derived from alignment at KZ851944.1:90017..91158+ (Aspergillus niger ATCC 13496)
GGATTGGGGTTGGTGGAAGTAAATCCGGTAGCGGCGGTTGCCATGTGCAA
CAAGCATGATGACATCGTCTCCCCCACACTCTCAACCAGGCCTGGCCCAG
ACGTAGTCCTGGATTTTCCTTCAGCCTGGACTCTTCTCATTAAACTGCTG
CACATCATCTACATACCCTCTGATAGCGGACGCTATTTCATCAAAGTCAC
AAAATGCCTCCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTC
AAACCAGGCGACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCAT
CAGCAGCGCCATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATT
GATACTACTCGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGA
ACAGGCCTCTGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGC
TTGCCGTAAGGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAA
GAGGATGCTAAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTG
GAAGAAGGAAGAAGCAAAGAGACAAGGGCCCAGAGGTGAGTGACACGCCC
CAGTCAGGCATCTCCTGTGACAAGTACGCTGATCATCTCCACTAGTTCAC
CAGGAGGGCCTCGAGCTACGAGAGAAGATTCTGCGCAACTTCGACCTCTC
AAGCCAGTACGGGGTAGGTCTGACTCTATTCATATACCTCATGTTCTTTT
GAGCTGACCTTATATTGGTGTAGCCTTGCATTGGAATTGCTCGACTGAAG
CGGTGGAGACGTGCGCATATGCTGGGCCTCAATCCTCCCATTGAGGTGTT
GGCCGTGTTGTTGAAACCGGACGATACCACTAAACAGAGAGCGTATATTG
ACGAGTTGATGTCTTGAGCATCGGCTTGGTGGGACCCTGCAATTATATAT
TTCTGTCCCATGGAACAACGGGGGATAGATTTGGGAGTATGGGTGTTTGT
TGGACGGGCGTTTGGGAGAACTCTGCGCATACCCTTTGGATTACTATTGT
TGAATGACCTACACTACTTTGATTGCCAACCTCCGTCTTCTCCCAGTCAA
CTCTCTTGATCTGCAGACACTGTGGAACACAAGTAGCCACTC
back to top

Coding sequence (CDS) from alignment at KZ851944.1:90017..91158+

>M747DRAFT_334813-T1 ID=M747DRAFT_334813-T1|Name=M747DRAFT_334813-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1782bp|location=Sequence derived from alignment at KZ851944.1:90017..91158+ (Aspergillus niger ATCC 13496)
ATGCCTCCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAA
CCAGGCGACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAG
CAGCGCCATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGAT
ACTACTCGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACA
GGCCTCTGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTG
CCGTAAGGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAG
GATGCTAAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAA
GAAGGAAGAAGCAAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCG
AGCTACGAGAGAAGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGG
CCTTGCATTGGAATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCT
GGGCCTCAATCCTCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACG
ATACCACTAAACAGAGAGCGTATATTGACGAGTTGATGTCTTGAATGCCT
CCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAACCAGGC
GACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAGCAGCGC
CATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGATACTACT
CGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACAGGCCTC
TGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTGCCGTAA
GGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAGGATGCT
AAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAAGAAGGA
AGAAGCAAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCGAGCTAC
GAGAGAAGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGGCCTTGC
ATTGGAATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCTGGGCCT
CAATCCTCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACGATACCA
CTAAACAGAGAGCGTATATTGACGAGTTGATGTCTTGAATGCCTCCCTCT
CGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAACCAGGCGACCTT
ATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAGCAGCGCCATCTA
CACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGATACTACTCGATCG
AGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACAGGCCTCTGTTAC
TCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTGCCGTAAGGAAGC
AGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAGGATGCTAAGGCG
GAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAAGAAGGAAGAAGC
AAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCGAGCTACGAGAGA
AGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGGCCTTGCATTGGA
ATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCTGGGCCTCAATCC
TCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACGATACCACTAAAC
AGAGAGCGTATATTGACGAGTTGATGTCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_334813M747DRAFT_334813Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334813-T1M747DRAFT_334813-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334813-T1.utr5p1M747DRAFT_334813-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334813-T1.exon1M747DRAFT_334813-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_334813-T1.exon2M747DRAFT_334813-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_334813-T1.exon3M747DRAFT_334813-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334813-T1.cdsM747DRAFT_334813-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334813-T1.utr3p1M747DRAFT_334813-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007218
DBxrefPFAM:PF04081
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:90017..91158 +
Powered by Drupal