You are here

Home

M747DRAFT_334818-T1, M747DRAFT_334818-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_334818-T1
Unique NameM747DRAFT_334818-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:109536..111014-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_334818-T1 ID=M747DRAFT_334818-T1|Name=M747DRAFT_334818-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1479bp|location=Sequence derived from alignment at KZ851944.1:109536..111014- (Aspergillus niger ATCC 13496)
ACCAGGGAAACACAAGCAGTTGGTCAACCTAGAAACAATCAGAACAAAGA
TGACGAACGATACGAAACAAAAAGCCGATACTGCGGCTAACAGTGACGGT
GAAGAAGAGGACGTGTTTCACGATGCGCGCTTCCCCGCTGAAGAAGAAAC
GGTGAGGTTACGTCTTTGCCCCTCACCAGCAGCAGCATACTAATATGGCT
ACGAAAACTAGCGACTCCTAGAAGAATCCCATACCATTAAAGCCGAAGCC
AACAAATTATTTACCGCAGCCTGCTATGACCAAGCCATCTCGTGCTACGA
CCGCGCCCTCGCCTCATGCCCCAACTACCTCGACTACGAAGTCGCCGTCC
TGCGAAGCAACATGTCCGCTTGTTATCTGAAACTTGAAGATTGGAAAGCG
TCCGTCGACGCAGCGACTGCCTGTATAGACCGCTTGGATAAGGTGGTTCC
TCCTGCGACAGGGGCAGTCGATGCGGAGGGTGCCAAGGGAAAGCAGCCGC
AAGAGTCGAGTGGCGAAGACGCCGTGGTCGAGATAACGGGTGACGATGAC
GAGGCCGAGGAAGAATTGAAGCGGTTACAAAAGCAGGATGAGAAGAAACG
GGATGTGCTGCGTATTCGCGCAAAGGCGCTTATGCGTCGGGCGCGGGCGA
AAATGCAGCTCGGCGGCTGGGGGAACCTGCAAGGGGCGGAAGAGGACTAT
AAGGAGCTGGCTGCGATGGATAATTTGCCGCCGGATGATAGGCGTGTTGT
GCAGAAGGCTCTTCGGGAGCTACCTGCGAAGATCGGTCAAGCGAGGGAGA
AGGAGATGGGGGAGATGATGGGGAAGCTCAAGGATGTAAGTCGATGCTTT
TCGAAGTTACTTATTGACATGCTAACGGGATATAGCTTGGTAATGGATTC
CTTAAGCCGTTTGGGCTGTCGACCGATAACTTCAACTTTGTGCAGGATCC
GAAGACGGGTGGATATAGCATGAACTTCCAGTCATGAACTTCCAGTTGGT
TGATCTGCTGATAGAATTGCTTCCCAAGATGCATTGCGGAGTTCGGGATT
TGATAGTTGAGCGTCGTATAAATTGGTCGTAATTTCATGCCTGACATGGG
ATCTCTTAGTCGACAGTATCTACAAACCATTGACAGGACAATTGTGAGTA
TAAATTGCTGCTATTGAAGTCTCAGTTAGGTAATGGAGATTGGGTCATGC
CTTATCTTGCGCGCGGAAAAAGCTACGCAACATTTATATGGGTCTGATTG
AATTCGCTTAGCAGCTGCAGCGATTGGAACCGATCTTCAAACAGAGCCGG
GCAAGGTGATACCAGAAAGAGTCAAGATGAGCATGGAGATCCCCGCATAT
CCGCACTGGGGGATTTCCGAGCGGGGAGCTATATCCTTAAAACCGGGCTG
CCATCAAGTCAAATCAATGCCATTCCCTCTCCATAACTACCTCTTTTCTT
TCTCGTCGTCTACATATCACACCATGTCA
back to top

Coding sequence (CDS) from alignment at KZ851944.1:109536..111014-

>M747DRAFT_334818-T1 ID=M747DRAFT_334818-T1|Name=M747DRAFT_334818-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2484bp|location=Sequence derived from alignment at KZ851944.1:109536..111014- (Aspergillus niger ATCC 13496)
CTTGGTAATGGATTCCTTAAGCCGTTTGGGCTGTCGACCGATAACTTCAA
CTTTGTGCAGGATCCGAAGACGGGTGGATATAGCATGAACTTCCAGTCAT
GACGACTCCTAGAAGAATCCCATACCATTAAAGCCGAAGCCAACAAATTA
TTTACCGCAGCCTGCTATGACCAAGCCATCTCGTGCTACGACCGCGCCCT
CGCCTCATGCCCCAACTACCTCGACTACGAAGTCGCCGTCCTGCGAAGCA
ACATGTCCGCTTGTTATCTGAAACTTGAAGATTGGAAAGCGTCCGTCGAC
GCAGCGACTGCCTGTATAGACCGCTTGGATAAGGTGGTTCCTCCTGCGAC
AGGGGCAGTCGATGCGGAGGGTGCCAAGGGAAAGCAGCCGCAAGAGTCGA
GTGGCGAAGACGCCGTGGTCGAGATAACGGGTGACGATGACGAGGCCGAG
GAAGAATTGAAGCGGTTACAAAAGCAGGATGAGAAGAAACGGGATGTGCT
GCGTATTCGCGCAAAGGCGCTTATGCGTCGGGCGCGGGCGAAAATGCAGC
TCGGCGGCTGGGGGAACCTGCAAGGGGCGGAAGAGGACTATAAGGAGCTG
GCTGCGATGGATAATTTGCCGCCGGATGATAGGCGTGTTGTGCAGAAGGC
TCTTCGGGAGCTACCTGCGAAGATCGGTCAAGCGAGGGAGAAGGAGATGG
GGGAGATGATGGGGAAGCTCAAGGATATGACGAACGATACGAAACAAAAA
GCCGATACTGCGGCTAACAGTGACGGTGAAGAAGAGGACGTGTTTCACGA
TGCGCGCTTCCCCGCTGAAGAAGAAACGCTTGGTAATGGATTCCTTAAGC
CGTTTGGGCTGTCGACCGATAACTTCAACTTTGTGCAGGATCCGAAGACG
GGTGGATATAGCATGAACTTCCAGTCATGACGACTCCTAGAAGAATCCCA
TACCATTAAAGCCGAAGCCAACAAATTATTTACCGCAGCCTGCTATGACC
AAGCCATCTCGTGCTACGACCGCGCCCTCGCCTCATGCCCCAACTACCTC
GACTACGAAGTCGCCGTCCTGCGAAGCAACATGTCCGCTTGTTATCTGAA
ACTTGAAGATTGGAAAGCGTCCGTCGACGCAGCGACTGCCTGTATAGACC
GCTTGGATAAGGTGGTTCCTCCTGCGACAGGGGCAGTCGATGCGGAGGGT
GCCAAGGGAAAGCAGCCGCAAGAGTCGAGTGGCGAAGACGCCGTGGTCGA
GATAACGGGTGACGATGACGAGGCCGAGGAAGAATTGAAGCGGTTACAAA
AGCAGGATGAGAAGAAACGGGATGTGCTGCGTATTCGCGCAAAGGCGCTT
ATGCGTCGGGCGCGGGCGAAAATGCAGCTCGGCGGCTGGGGGAACCTGCA
AGGGGCGGAAGAGGACTATAAGGAGCTGGCTGCGATGGATAATTTGCCGC
CGGATGATAGGCGTGTTGTGCAGAAGGCTCTTCGGGAGCTACCTGCGAAG
ATCGGTCAAGCGAGGGAGAAGGAGATGGGGGAGATGATGGGGAAGCTCAA
GGATATGACGAACGATACGAAACAAAAAGCCGATACTGCGGCTAACAGTG
ACGGTGAAGAAGAGGACGTGTTTCACGATGCGCGCTTCCCCGCTGAAGAA
GAAACGCTTGGTAATGGATTCCTTAAGCCGTTTGGGCTGTCGACCGATAA
CTTCAACTTTGTGCAGGATCCGAAGACGGGTGGATATAGCATGAACTTCC
AGTCATGACGACTCCTAGAAGAATCCCATACCATTAAAGCCGAAGCCAAC
AAATTATTTACCGCAGCCTGCTATGACCAAGCCATCTCGTGCTACGACCG
CGCCCTCGCCTCATGCCCCAACTACCTCGACTACGAAGTCGCCGTCCTGC
GAAGCAACATGTCCGCTTGTTATCTGAAACTTGAAGATTGGAAAGCGTCC
GTCGACGCAGCGACTGCCTGTATAGACCGCTTGGATAAGGTGGTTCCTCC
TGCGACAGGGGCAGTCGATGCGGAGGGTGCCAAGGGAAAGCAGCCGCAAG
AGTCGAGTGGCGAAGACGCCGTGGTCGAGATAACGGGTGACGATGACGAG
GCCGAGGAAGAATTGAAGCGGTTACAAAAGCAGGATGAGAAGAAACGGGA
TGTGCTGCGTATTCGCGCAAAGGCGCTTATGCGTCGGGCGCGGGCGAAAA
TGCAGCTCGGCGGCTGGGGGAACCTGCAAGGGGCGGAAGAGGACTATAAG
GAGCTGGCTGCGATGGATAATTTGCCGCCGGATGATAGGCGTGTTGTGCA
GAAGGCTCTTCGGGAGCTACCTGCGAAGATCGGTCAAGCGAGGGAGAAGG
AGATGGGGGAGATGATGGGGAAGCTCAAGGATATGACGAACGATACGAAA
CAAAAAGCCGATACTGCGGCTAACAGTGACGGTGAAGAAGAGGACGTGTT
TCACGATGCGCGCTTCCCCGCTGAAGAAGAAACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_334818M747DRAFT_334818Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334818-T1M747DRAFT_334818-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334818-T1.cdsM747DRAFT_334818-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334818-T1.utr3p1M747DRAFT_334818-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334818-T1.exon3M747DRAFT_334818-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_334818-T1.exon2M747DRAFT_334818-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_334818-T1.exon1M747DRAFT_334818-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334818-T1.utr5p1M747DRAFT_334818-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011990
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:109536..111014 -
Powered by Drupal