You are here

Home

M747DRAFT_335075-T1, M747DRAFT_335075-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_335075-T1
Unique NameM747DRAFT_335075-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851947.1:201128..202471+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_335075-T1 ID=M747DRAFT_335075-T1|Name=M747DRAFT_335075-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1344bp|location=Sequence derived from alignment at KZ851947.1:201128..202471+ (Aspergillus niger ATCC 13496)
ATCAGCTCTGCAGCACCACGTCATACAACCTGAGGAGTTTTGCCCTGGAA
TATTTCCTTCCGGATTGGCGTTATTCAGGGACGCATCAACCAGACCTGAC
GTCTCGCAAAACACCCATCCAGTTCGATAAGTTTGCGGTCACGCACACTG
CACACTCCCCGACCACCGCAGTTCGGGGGCCCTCCAACACATCCAACCTA
ATCTAATCGCCTATTCACATTAAAATACACAATTCATGCCCCCACGCCGC
CGGGCCCCTCGAGCGGGCTCTCGAACTGACCTTCCACCACTGAAGATTGT
CCGGAAGATCCTCCTCCTTCAAGTCGCCTACTATGTCACCGCCACGGCTC
TCATCCTCTTTACAACGGTCGTCTACGGCACGCCCTTCTCCCTCGACCTT
GTCTTCAGTTGGAATGCCCTCCGCGGCGATACTACCATTGGATGGATGCT
TGGCTTGGTGTGGTTGTTGACTAGTGGGATTGGGTAAGTTCTTTAGCTTC
CATTTTCACGGCCCAAGGCACAAGTTCTAACAAGAAGTCTACATTAAAGG
GTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACTT
CGCCCTAACCCTACACTTCCTCCACCTCATCGCTACAACCTTGTACACGC
ATTCCGTGCCCGCGAATTGGCTCTGGTGGGGCCTGCAGGGTGCGAGTGCC
GCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGCA
GCCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGTA
TATCTGCTGGAGCTTCAGGCGGTGGTGAGGCGCAAAGCGGTGCTGGCGGT
GAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGCG
CGATAGTAGCAGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGTG
ACGCGGCAGTATAGATTTCCTTTTTTTGCTTCTTTTTCCCTTTCTATGTC
ATGACCTTATCACCCTATTATCGCCTTTATTGACCTTGAGTACGTGAGAC
TATCACTGGATGTGGCTATGGTCTTTTTCACGTTTGCTCTTATTCCTTTC
TCATGTATACCCTAGCTGGCTGGTACCTGCATTGGTGGCGTTGTTGGATT
GGATTGATGCCAATTACTTCTTTTCATATTGTGATCCTTGATGTGTTGAT
TTTGAATTCTTACTTTGTGAAATATATATTCATCCTGCTGTGGCGATCAA
AAGGATTTAGAAGGCACTGGCGTTGTCTATATCCAGATGTACTACTTTAG
TACATAGCGCGGCATTAGAACAAGGACCATAGAGTATAGTCAAG
back to top

Coding sequence (CDS) from alignment at KZ851947.1:201128..202471+

>M747DRAFT_335075-T1 ID=M747DRAFT_335075-T1|Name=M747DRAFT_335075-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1326bp|location=Sequence derived from alignment at KZ851947.1:201128..202471+ (Aspergillus niger ATCC 13496)
ATGCCCCCACGCCGCCGGGCCCCTCGAGCGGGCTCTCGAACTGACCTTCC
ACCACTGAAGATTGTCCGGAAGATCCTCCTCCTTCAAGTCGCCTACTATG
TCACCGCCACGGCTCTCATCCTCTTTACAACGGTCGTCTACGGCACGCCC
TTCTCCCTCGACCTTGTCTTCAGTTGGAATGCCCTCCGCGGCGATACTAC
CATTGGATGGATGCTTGGCTTGGTGTGGTTGTTGACTAGTGGGATTGGGG
TTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACTTC
GCCCTAACCCTACACTTCCTCCACCTCATCGCTACAACCTTGTACACGCA
TTCCGTGCCCGCGAATTGGCTCTGGTGGGGCCTGCAGGGTGCGAGTGCCG
CGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGCAG
CCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGTAT
ATCTGCTGGAGCTTCAGGCGGTGGTGAGGCGCAAAGCGGTGCTGGCGGTG
AGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGCGC
GATAGTAGCAGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGTGA
CGCGGCAGTATAGATGCCCCCACGCCGCCGGGCCCCTCGAGCGGGCTCTC
GAACTGACCTTCCACCACTGAAGATTGTCCGGAAGATCCTCCTCCTTCAA
GTCGCCTACTATGTCACCGCCACGGCTCTCATCCTCTTTACAACGGTCGT
CTACGGCACGCCCTTCTCCCTCGACCTTGTCTTCAGTTGGAATGCCCTCC
GCGGCGATACTACCATTGGATGGATGCTTGGCTTGGTGTGGTTGTTGACT
AGTGGGATTGGGGTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCT
TATCCCCGACTTCGCCCTAACCCTACACTTCCTCCACCTCATCGCTACAA
CCTTGTACACGCATTCCGTGCCCGCGAATTGGCTCTGGTGGGGCCTGCAG
GGTGCGAGTGCCGCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTG
GCGGGAACTGCAGCCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAGCA
GTGGTGGTGGTATATCTGCTGGAGCTTCAGGCGGTGGTGAGGCGCAAAGC
GGTGCTGGCGGTGAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGG
ACGAGGCTTGCGCGATAGTAGCAGTGGCGGGGATGAGTATGAGATGGTGG
AAATGAAGGGTGACGCGGCAGTATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_335075M747DRAFT_335075Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335075-T1.utr5p1M747DRAFT_335075-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335075-T1.exon1M747DRAFT_335075-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_335075-T1.exon2M747DRAFT_335075-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335075-T1.cdsM747DRAFT_335075-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335075-T1.utr3p1M747DRAFT_335075-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335075-T1M747DRAFT_335075-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019185
DBxrefPFAM:PF09801
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851947.1supercontigKZ851947.1:201128..202471 +
Powered by Drupal