You are here

Home

M747DRAFT_335423-T1, M747DRAFT_335423-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_335423-T1
Unique NameM747DRAFT_335423-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851953.1:160776..162711-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_335423-T1 ID=M747DRAFT_335423-T1|Name=M747DRAFT_335423-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1936bp|location=Sequence derived from alignment at KZ851953.1:160776..162711- (Aspergillus niger ATCC 13496)
AAAAACTGAGCCAGAATGTCGAGTGAGAAGCAAACCGCCCCGAATGCTCC
CTCCCCTCCAGCACCACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGC
GCTTTTGGGCCATTTTCCCTCCGCTATGCGTGGCTACATTACTGTCAGCG
CTAGAATCTACGGTCGTGTCGACGGCCCTGCCCTCCATTGTGGATGATCT
CCACTCGGGAAATCTGTACATCTGGTTTGTCAATGGCTACTTCTTAACTT
TGTAAGTGTCCCCTTTCCCCTCCCCCTATGAACTGCTGCTGGACATCTCA
TCCTGAACGCGATCTCACACACACTCACACACAGCACCGCTTTCCAACCG
CTGTATGGCCAGTTGGCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGG
GGCCGTGGCAATATTTGCATTGGGCAGTGGCATCAGCGGCGGTGCCAGCA
GCTCAGCCATGCTGCTGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGC
GGCATCAGTCTCATGACACAGTTGGTCATTAGTGACCTGGTGTCGGTGCG
TGAACGAGGCAAGTTCATGGCCATCATCTTCACCACCTTCTCGCTGGGGA
CCTCGCTGGGCCCGTTTATTGGGGGCGCGCTGGTCGACAACACCACCTGG
CGCTGGGTGTTCTACATCAACTTACCCATCGCCGGCGCCGCCCTCGTCTT
GCTGTACTTCTTTCTGCAGGTCCATTTCCAGCGGCGACTCACGGTGCGAC
AGAAGATGAGCCGCATCGACTTCGTGGGTAATGCCATTCTGATTGCCTCG
GTCACCTCCGTCCTCATTGCCCTCTCCTGGGGCGGATCCCGGTATAGCTG
GCGCTCCTGGCATGTGCTGGTTCCCCTCTTGGTCGGATTTGCGGGCACGG
GCTTCTTTCACTTCTACGAAAGTACCCGCTTCTGCAAGGAGCCCACGTTG
CCGACACGTATCCTCGCCAATAACCGGACCACCTCCATTGTTCTCTTCTG
TTCATTCTGCCAGTTTCTGCTGTCCTTCTGGACCATCTACTTCCTGCCCA
TCTACTTCCAGGGCGTCCTCCTCGTCTCCCCCGAGCGCAGTGGCGTCTTA
CTCCTCCCGTTTGTCATTACCAGTCTACCCATCGCCATGCTCTTTGGCAA
TCTGCTCACCCGTTGGGGCCGGTACAAGCCCATCCACATTGTGGCTTTCA
TGCTGATCACCCTGGGCACCGGGCTGTTCATCCGCCTGGATCAGCACTCG
TCCATGGCGGAGTATGTCATCTTCCAGATCATCACCGCTGTGGGCACGGG
GATGATCATGTCGACCTTGCTGCCCGCCGTGCAGGCCCCATTGCAGGACA
CTCAGGTGGCCCCCGCGACGGCGACTTGGGGCTTCTTGCGAGCGTACGGC
GGCGTCTGGGGGGTGGCCATCCCGGGCGCGATCTTCAACTCCCAGATCCA
GACCAATCTGAGCAAGCGCGTGAGTGATCCGGATGTGCGACGCACCCTGG
GGAGTGGATCGGCCTACTCGCATGTCTCAAGCTCCTACATTCGCTCCCTG
CCCGCCGACGTCCGCGATGATGTGGTCAGCGTCTATGTCGACGCCCTCCG
CATTGTGTGGGCCACCGCCACGGCGTTTGCTGGACTGTGCTTCCTGCTCA
CCTTGCTGGAGAAGGAGGTCCCCTTGCGCACCTCGGTGAAATCAGACTAC
GGGATGCGTCGTCGTGAGCAGGAGAAGACGACCGCAGGGGATAGCAATGG
GAATGCGGAGTCCAGCCAGTCCAACTCGAGCCCGGACGCCTCGTCTACAC
CGCGCCCTGCTGACCCGCATTCATCATAGACTTTTTCTCCAACTCTTGCC
TCTTCTGTATTGACTCCTCCTGTGAGACACCTGCCTTCTTTTTGTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
back to top

Coding sequence (CDS) from alignment at KZ851953.1:160776..162711-

>M747DRAFT_335423-T1 ID=M747DRAFT_335423-T1|Name=M747DRAFT_335423-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3462bp|location=Sequence derived from alignment at KZ851953.1:160776..162711- (Aspergillus niger ATCC 13496)
CACCGCTTTCCAACCGCTGTATGGCCAGTTGGCCCAAGTGTTCGGCCGGC
GCTGGCTGCTGATCGGGGCCGTGGCAATATTTGCATTGGGCAGTGGCATC
AGCGGCGGTGCCAGCAGCTCAGCCATGCTGCTGGTTGGTCGAGTCCTTCA
AGGCGCAGGTGGCGGCGGCATCAGTCTCATGACACAGTTGGTCATTAGTG
ACCTGGTGTCGGTGCGTGAACGAGGCAAGTTCATGGCCATCATCTTCACC
ACCTTCTCGCTGGGGACCTCGCTGGGCCCGTTTATTGGGGGCGCGCTGGT
CGACAACACCACCTGGCGCTGGGTGTTCTACATCAACTTACCCATCGCCG
GCGCCGCCCTCGTCTTGCTGTACTTCTTTCTGCAGGTCCATTTCCAGCGG
CGACTCACGGTGCGACAGAAGATGAGCCGCATCGACTTCGTGGGTAATGC
CATTCTGATTGCCTCGGTCACCTCCGTCCTCATTGCCCTCTCCTGGGGCG
GATCCCGGTATAGCTGGCGCTCCTGGCATGTGCTGGTTCCCCTCTTGGTC
GGATTTGCGGGCACGGGCTTCTTTCACTTCTACGAAAGTACCCGCTTCTG
CAAGGAGCCCACGTTGCCGACACGTATCCTCGCCAATAACCGGACCACCT
CCATTGTTCTCTTCTGTTCATTCTGCCAGTTTCTGCTGTCCTTCTGGACC
ATCTACTTCCTGCCCATCTACTTCCAGGGCGTCCTCCTCGTCTCCCCCGA
GCGCAGTGGCGTCTTACTCCTCCCGTTTGTCATTACCAGTCTACCCATCG
CCATGCTCTTTGGCAATCTGCTCACCCGTTGGGGCCGGTACAAGCCCATC
CACATTGTGGCTTTCATGCTGATCACCCTGGGCACCGGGCTGTTCATCCG
CCTGGATCAGCACTCGTCCATGGCGGAGTATGTCATCTTCCAGATCATCA
CCGCTGTGGGCACGGGGATGATCATGTCGACCTTGCTGCCCGCCGTGCAG
GCCCCATTGCAGGACACTCAGGTGGCCCCCGCGACGGCGACTTGGGGCTT
CTTGCGAGCGTACGGCGGCGTCTGGGGGGTGGCCATCCCGGGCGCGATCT
TCAACTCCCAGATCCAGACCAATCTGAGCAAGCGCGTGAGTGATCCGGAT
GTGCGACGCACCCTGGGGAGTGGATCGGCCTACTCGCATGTCTCAAGCTC
CTACATTCGCTCCCTGCCCGCCGACGTCCGCGATGATGTGGTCAGCGTCT
ATGTCGACGCCCTCCGCATTGTGTGGGCCACCGCCACGGCGTTTGCTGGA
CTGTGCTTCCTGCTCACCTTGCTGGAGAAGGAGGTCCCCTTGCGCACCTC
GGTGAAATCAGACTACGGGATGCGTCGTCGTGAGCAGGAGAAGACGACCG
CAGGGGATAGCAATGGGAATGCGGAGTCCAGCCAGTCCAACTCGAGCCCG
GACGCCTCGTCTACACCGCGCCCTGCTGACCCGCATTCATCATAGATGTC
GAGTGAGAAGCAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACCACCGC
CACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTTTCCCT
CCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTCGTGTC
GACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCTGTACA
TCTGGTTTGTCAATGGCTACTTCTTAACTTTCACCGCTTTCCAACCGCTG
TATGGCCAGTTGGCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGGGGC
CGTGGCAATATTTGCATTGGGCAGTGGCATCAGCGGCGGTGCCAGCAGCT
CAGCCATGCTGCTGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGCGGC
ATCAGTCTCATGACACAGTTGGTCATTAGTGACCTGGTGTCGGTGCGTGA
ACGAGGCAAGTTCATGGCCATCATCTTCACCACCTTCTCGCTGGGGACCT
CGCTGGGCCCGTTTATTGGGGGCGCGCTGGTCGACAACACCACCTGGCGC
TGGGTGTTCTACATCAACTTACCCATCGCCGGCGCCGCCCTCGTCTTGCT
GTACTTCTTTCTGCAGGTCCATTTCCAGCGGCGACTCACGGTGCGACAGA
AGATGAGCCGCATCGACTTCGTGGGTAATGCCATTCTGATTGCCTCGGTC
ACCTCCGTCCTCATTGCCCTCTCCTGGGGCGGATCCCGGTATAGCTGGCG
CTCCTGGCATGTGCTGGTTCCCCTCTTGGTCGGATTTGCGGGCACGGGCT
TCTTTCACTTCTACGAAAGTACCCGCTTCTGCAAGGAGCCCACGTTGCCG
ACACGTATCCTCGCCAATAACCGGACCACCTCCATTGTTCTCTTCTGTTC
ATTCTGCCAGTTTCTGCTGTCCTTCTGGACCATCTACTTCCTGCCCATCT
ACTTCCAGGGCGTCCTCCTCGTCTCCCCCGAGCGCAGTGGCGTCTTACTC
CTCCCGTTTGTCATTACCAGTCTACCCATCGCCATGCTCTTTGGCAATCT
GCTCACCCGTTGGGGCCGGTACAAGCCCATCCACATTGTGGCTTTCATGC
TGATCACCCTGGGCACCGGGCTGTTCATCCGCCTGGATCAGCACTCGTCC
ATGGCGGAGTATGTCATCTTCCAGATCATCACCGCTGTGGGCACGGGGAT
GATCATGTCGACCTTGCTGCCCGCCGTGCAGGCCCCATTGCAGGACACTC
AGGTGGCCCCCGCGACGGCGACTTGGGGCTTCTTGCGAGCGTACGGCGGC
GTCTGGGGGGTGGCCATCCCGGGCGCGATCTTCAACTCCCAGATCCAGAC
CAATCTGAGCAAGCGCGTGAGTGATCCGGATGTGCGACGCACCCTGGGGA
GTGGATCGGCCTACTCGCATGTCTCAAGCTCCTACATTCGCTCCCTGCCC
GCCGACGTCCGCGATGATGTGGTCAGCGTCTATGTCGACGCCCTCCGCAT
TGTGTGGGCCACCGCCACGGCGTTTGCTGGACTGTGCTTCCTGCTCACCT
TGCTGGAGAAGGAGGTCCCCTTGCGCACCTCGGTGAAATCAGACTACGGG
ATGCGTCGTCGTGAGCAGGAGAAGACGACCGCAGGGGATAGCAATGGGAA
TGCGGAGTCCAGCCAGTCCAACTCGAGCCCGGACGCCTCGTCTACACCGC
GCCCTGCTGACCCGCATTCATCATAGATGTCGAGTGAGAAGCAAACCGCC
CCGAATGCTCCCTCCCCTCCAGCACCACCGCCACCGTCAGATCCTCCGCG
GCGAGATTGGCGCTTTTGGGCCATTTTCCCTCCGCTATGCGTGGCTACAT
TACTGTCAGCGCTAGAATCTACGGTCGTGTCGACGGCCCTGCCCTCCATT
GTGGATGATCTCCACTCGGGAAATCTGTACATCTGGTTTGTCAATGGCTA
CTTCTTAACTTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_335423M747DRAFT_335423Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335423-T1M747DRAFT_335423-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335423-T1.cdsM747DRAFT_335423-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335423-T1.utr3p1M747DRAFT_335423-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335423-T1.exon2M747DRAFT_335423-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_335423-T1.exon1M747DRAFT_335423-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335423-T1.utr5p1M747DRAFT_335423-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519531.3
NoteantiSMASH:Cluster_8519531.2
NoteEggNog:ENOG41
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
ProductMFS general substrate transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851953.1supercontigKZ851953.1:160776..162711 -
Powered by Drupal