|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851958.1:133244..134801- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_335645-T1 ID=M747DRAFT_335645-T1|Name=M747DRAFT_335645-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1558bp|location=Sequence derived from alignment at KZ851958.1:133244..134801- (Aspergillus niger ATCC 13496) ATTGTCGCCCCGTCGCTGATGTCTATTTCTTTGTCATTCAATCTGTAATT
ACACTAAACCGTTGGACGATCTCTCGCGAAATCCGCCAAGCTGTTTTCCC
GACTTCTCAGCCTTGCTTCTTTCGGAACAATGCCCCGTAAGTAGCCGCAA
ACTAAAACAGTTATGCTTTTCATTGAGACAAGGTCATATTAACTTCATTT
CAGCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGTCG
ATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGACGA
TGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTGTAAGCTTGCGCGC
GTGCGACCTAGTCGCGAGCAAGAATTGACGTGAACAGATACATTGTTGAG
AAGATTGTGAATCATGAATGGGCCAAAAATGTGCGCGACATTATATCTAC
CCGTTCAATTGACCAACAGGGCATGCTTTAGCTAATGATGTGGCAGGGCG
ACCTCCTTCTTCAAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTG
ACACTGGAGCCAGAAGAGAATCTACTGTATGCTGCTGGATGTCGTTTCTT
TCAGCTTCAACAAAACTGATGGGTCGTTTACAGAGAAGGCGCGAAGGAAA
TAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAAAGCCACAA
CCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAGTCCGCGCC
CGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGCTGAAACAG
CAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAGGTGAAAGC
GACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAGAAGGAGGT
CGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAATCTGCTTG
CGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACATAGAGATG
TGCTACGACAAGTGCCCGAAGAAGGTGAGTTATCTGGGATCCGCGGTTCT
TCACCGGCGCTGACTTGTAGCAAGATGCTCCAATTCTATGAATCACATCT
GTAAATCATCCTTATCCATCGCCTCATAAGACGAGCATATGCTAACCACT
CTCATTAGGGTCTTTAAGGAGGGCTAAACCTCTATTCGTTAAAGTTCGGG
TTCTTTATTAATCATCGTCTAATTTACGACAGGCGCAATTGCAGATTAGT
GTTGAAGGAGCAAGCATATAGGGCGTTTTTGAAGTTTCACATACTGGTTC
CAGATAACCTAAGTGTAAGACAATGGCCTGGGCTAGTCTCGACATGGACT
TTTCTTAGAGTCCTCCTGTTTGAAGGGAACCAACACCGGAATATAACGGG
AATGCGCCAGCTGCTCCAGGCCTTCGCGAACTCATTCGCACCATTTCTCT
TTGGATATCAATTGTTTCCCGGATTTTTATCTTTGTGTCTCTATTTAGCG
TCTTAAGATCCATGTACATTATCATTAGTTCGCGGTTCTGGAACATTGAA
ATTGCGGC back to topCoding sequence (CDS) from alignment at KZ851958.1:133244..134801- >M747DRAFT_335645-T1 ID=M747DRAFT_335645-T1|Name=M747DRAFT_335645-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4893bp|location=Sequence derived from alignment at KZ851958.1:133244..134801- (Aspergillus niger ATCC 13496) GGTCTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAG GCGCGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCT GAAAAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCC AAAGTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGC GGGCTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGAT GAAGGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTG GGAGAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGT CGAATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTC AACATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCT TCAAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGC CAGAAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGG GCCAAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGC GAGTCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGA TGACGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCG GTCTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGG CGCGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTG AAAAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCA AAGTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCG GGCTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATG AAGGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGG GAGAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTC GAATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCA ACATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTT CAAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCC AGAAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGG CCAAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCG AGTCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGAT GACGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGG TCTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGC GCGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGA AAAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAA AGTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGG GCTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGA AGGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGG AGAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCG AATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAA CATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTC AAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCA GAAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGC CAAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGA GTCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATG ACGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGT CTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCG CGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAA AAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAA GTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGG CTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAA GGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGA GAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGA ATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAAC ATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCA AGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAG AAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCC AAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAG TCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGA CGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGTC TTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCGC GAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAA AGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAG TCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGC TGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAG GTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAG AAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAA TCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACA TAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCAA GTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAGA AGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCCA AAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGT CGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGAC GATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGTCT TTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCGCG AAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAAA GCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAGT CCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGCT GAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAGG TGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAGA AGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAAT CTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACAT AGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCAAG TCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAGAA GAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCCAA AAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGTC GATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGACG ATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGTCTT TAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCGCGA AGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAAAG CCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAGTC CGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGCTG AAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAGGT GAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAGAA GGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAATC TGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACATA GAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCAAGT CAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAGAAG AGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCCAAA AATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGTCG ATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGACGA TGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR016197 |
DBxref | InterPro:IPR023780 |
DBxref | InterPro:IPR000953 |
DBxref | InterPro:IPR008251 |
DBxref | PFAM:PF01393 |
DBxref | PFAM:PF00385 |
Product | heterochromatin protein HP1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851958.1 | supercontig | KZ851958.1:133244..134801 - |
|