You are here

M747DRAFT_336221-T1, M747DRAFT_336221-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_336221-T1
Unique NameM747DRAFT_336221-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:191795..192410-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_336221-T1 ID=M747DRAFT_336221-T1|Name=M747DRAFT_336221-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=616bp|location=Sequence derived from alignment at KZ851899.1:191795..192410- (Aspergillus niger ATCC 13496)
ATGGATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCATCTTTC CCTAGAACCCTCACCCTCCGCTCCTCGTCGGCTATCCCATGGAAGCATAG ACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACCAGTCAT CCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTACAACCAC CGAGGACATGGACCCTGTGTCGAGGACGCAAGCCAAACAACGAGCAGACG TTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCTGTTCTA CTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGCTACTAG TACTGCATGTGGTAAGTTTAATGCTGCGATATCGCATGCTACCTAGCTGA CTCGATCAAGGGCATCTTTTCTGCCACAAGTGTATTATCGATACCTTGAA GTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGCA CTTGCCCTGTGTGCAGAAAGTATCTCTCGCGCAACGACTTGCCCGGTCCA AAGAGGAACCTCGTACCTCTACAGATCAAACTTACTACTCGAAAGAGGAG AGAGACCGCGCAATGA
back to top

Coding sequence (CDS) from alignment at KZ851899.1:191795..192410-

>M747DRAFT_336221-T1 ID=M747DRAFT_336221-T1|Name=M747DRAFT_336221-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1134bp|location=Sequence derived from alignment at KZ851899.1:191795..192410- (Aspergillus niger ATCC 13496)
GGCATCTTTTCTGCCACAAGTGTATTATCGATACCTTGAAGTTCAGCGAA
GAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGCACTTGCCCTGT
GTGCAGAAAGTATCTCTCGCGCAACGACTTGCCCGGTCCAAAGAGGAACC
TCGTACCTCTACAGATCAAACTTACTACTCGAAAGAGGAGAGAGACCGCG
CAATGAATGGATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCA
TCTTTCCCTAGAACCCTCACCCTCCGCTCCTCGTCGGCTATCCCATGGAA
GCATAGACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACC
AGTCATCCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTAC
AACCACCGAGGACATGGACCCTGTGTCGAGGACGCAAGCCAAACAACGAG
CAGACGTTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCT
GTTCTACTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGC
TACTAGTACTGCATGTGGGCATCTTTTCTGCCACAAGTGTATTATCGATA
CCTTGAAGTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCC
CGGGGCACTTGCCCTGTGTGCAGAAAGTATCTCTCGCGCAACGACTTGCC
CGGTCCAAAGAGGAACCTCGTACCTCTACAGATCAAACTTACTACTCGAA
AGAGGAGAGAGACCGCGCAATGAATGGATAGCGCATCTCCCAGGCGTCGG
GCTTCAGTTGCTCGTCATCTTTCCCTAGAACCCTCACCCTCCGCTCCTCG
TCGGCTATCCCATGGAAGCATAGACGCACTAGAAACCTCTGGCCACCAAA
GGAAGCGCCGTCGGACCAGTCATCCTGAGCGACAGGAGGATGCGCCCCCG
GATGCAGTCGATCTTACAACCACCGAGGACATGGACCCTGTGTCGAGGAC
GCAAGCCAAACAACGAGCAGACGTTATCCTCGCACAGCAGTCCCTAGATC
ATAACAAAGGGGAGTCTGTTCTACTTGCATACAAGTGTCCCGTCTGCATG
GACACCCCGGTTGATGCTACTAGTACTGCATGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_336221M747DRAFT_336221Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_336221-T1M747DRAFT_336221-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_336221-T1.cdsM747DRAFT_336221-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_336221-T1.exon2M747DRAFT_336221-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_336221-T1.exon1M747DRAFT_336221-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR018957
DBxrefInterPro:IPR001841
DBxrefPFAM:PF13445
DBxrefPFAM:PF14634
DBxrefPFAM:PF13639
DBxrefPFAM:PF13920
DBxrefPFAM:PF13923
DBxrefPFAM:PF00097
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:191795..192410 -