You are here

Home

M747DRAFT_336900-T1, M747DRAFT_336900-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_336900-T1
Unique NameM747DRAFT_336900-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:396237..397539-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_336900-T1 ID=M747DRAFT_336900-T1|Name=M747DRAFT_336900-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1303bp|location=Sequence derived from alignment at KZ851900.1:396237..397539- (Aspergillus niger ATCC 13496)
ATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCC
GAGCATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGG
CTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTG
CACGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTC
CAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAA
CCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCT
CGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGA
AGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATG
CGCCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATG
GATGATGCGCCGCCGCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGC
GGCAGCGGCAGCGCCGAGCGGGAAGGCCGTCAAAAGTGTAGAGGCAAAAG
AGATGGAACTGGATGATGACGACGAGGACGACGACGATGAGGAGCTCTCG
GAGCTGGAGTCAGACGCTGAAGGCGAGCCAGACGATCAAGACGAAAGTAT
GATGGCCAATGGTGGCGCAGAGGATTTAGAAGGAGAAGAGGAGGAAGAGG
ATGACGACCTGGACAGCGATGACGATACCCCGACCGCCGATCTGAGCAAG
ATGACCAAACGGCAAAGGGGAAACCTGGGTAACGACTTCCTGCAACTTCC
TATGGGTGAGTCTTCATGTTTCGCATGGTCATTGAAAGCATCATAAGTCT
GACTGAGAGCAGAACCCCAGGTGAAAAAGCACCTGACGGCCGAGGAGCGC
GCTATGCGTCGTGCCGAAATGGCTCGTCGTAGAAAGAACCTCAGCGAGAA
GCGGAATGAGGAGGAGAAGGTACGTACCATCTAGGGTTCTGCAAACTGCA
GCGGGGTGGGCTTTTCTGTACTTCGAGTCGATGCTGACATGAGACTCACA
GATGGACACCATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAG
GACGCATTCCAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAG
GTCGCGGAACCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGG
CCGCGAAGGCAGCCGAGTAGGTGTGCCAGAAGAATGGCTCGGTATACCTG
CAGGACGTGTCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTA
TAA
back to top

Coding sequence (CDS) from alignment at KZ851900.1:396237..397539-

>M747DRAFT_336900-T1 ID=M747DRAFT_336900-T1|Name=M747DRAFT_336900-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3492bp|location=Sequence derived from alignment at KZ851900.1:396237..397539- (Aspergillus niger ATCC 13496)
ATGGACACCATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAGG
ACGCATTCCAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAGG
TCGCGGAACCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGGC
CGCGAAGGCAGCCGAGTAGGTGTGCCAGAAGAATGGCTCGGTATACCTGC
AGGACGTGTCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTAT
AAAACCCCAGGTGAAAAAGCACCTGACGGCCGAGGAGCGCGCTATGCGTC
GTGCCGAAATGGCTCGTCGTAGAAAGAACCTCAGCGAGAAGCGGAATGAG
GAGGAGAAGATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGA
TGACCAGCCGAGCATGGATGCTAACATGAACACCAGATCTACGAGAGCTG
CCGCCCGGGCTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCA
TCTGAGTTGCACGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAA
GATGCCGTCCAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTG
GTGCATCAACCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTG
ACGGGTCCTCGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACAC
AAGCGATGAAGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACG
ATGAAGATGCGCCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGAT
TTAGACATGGATGATGCGCCGCCGCAGCCACCAGTGTCAAAACGGCAGGC
GAAAGCAGCGGCAGCGGCAGCGCCGAGCGGGAAGGCCGTCAAAAGTGTAG
AGGCAAAAGAGATGGAACTGGATGATGACGACGAGGACGACGACGATGAG
GAGCTCTCGGAGCTGGAGTCAGACGCTGAAGGCGAGCCAGACGATCAAGA
CGAAAGTATGATGGCCAATGGTGGCGCAGAGGATTTAGAAGGAGAAGAGG
AGGAAGAGGATGACGACCTGGACAGCGATGACGATACCCCGACCGCCGAT
CTGAGCAAGATGACCAAACGGCAAAGGGGAAACCTGGGTAACGACTTCCT
GCAACTTCCTATGGATGGACACCATCAACAGGCTTCTACGGAAGCAGGCA
CCCAAGCGACGAGGACGCATTCCAGCTGCAGAGACAGCCGAAGCAGCTTC
TGCAGAGCAGGAGGTCGCGGAACCCGAGAAACCGGACCCGACGATGGTGA
GGTGGGTAAGTGGCCGCGAAGGCAGCCGAGTAGGTGTGCCAGAAGAATGG
CTCGGTATACCTGCAGGACGTGTCTTTGATGGCAATGGCTCGGGCAAGCT
CGTGCAAGAGGTATAAAACCCCAGGTGAAAAAGCACCTGACGGCCGAGGA
GCGCGCTATGCGTCGTGCCGAAATGGCTCGTCGTAGAAAGAACCTCAGCG
AGAAGCGGAATGAGGAGGAGAAGATGCTTTTGCGTCGCTCACTACGTTCC
CGCTTGGGGCGGGATGACCAGCCGAGCATGGATGCTAACATGAACACCAG
ATCTACGAGAGCTGCCGCCCGGGCTGCTGTCTCCACCCCAGCGGTGACCA
TTTCACGCGTTGCATCTGAGTTGCACGGGAATTCCACTCATAGGTCTATC
CATTTGACAGTAAAGATGCCGTCCAGCAAACTTCGTGAAGTTACCAGTGG
TAGCACCCGAAGTGGTGCATCAACCAGACGTTCGGTTAATGTCTTTACGG
AGAATCCCATTGTGACGGGTCCTCGTACCAGCAGACCCAAAAAGAAGCTT
GTGGAAGTGGACACAAGCGATGAAGATGACCTGGAAGACCAGGAAGAAGA
TGAGGTGGACGACGATGAAGATGCGCCAGGTGAAGACGACGATGACGTAG
ATGCCGATGGCGATTTAGACATGGATGATGCGCCGCCGCAGCCACCAGTG
TCAAAACGGCAGGCGAAAGCAGCGGCAGCGGCAGCGCCGAGCGGGAAGGC
CGTCAAAAGTGTAGAGGCAAAAGAGATGGAACTGGATGATGACGACGAGG
ACGACGACGATGAGGAGCTCTCGGAGCTGGAGTCAGACGCTGAAGGCGAG
CCAGACGATCAAGACGAAAGTATGATGGCCAATGGTGGCGCAGAGGATTT
AGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGACAGCGATGACGATA
CCCCGACCGCCGATCTGAGCAAGATGACCAAACGGCAAAGGGGAAACCTG
GGTAACGACTTCCTGCAACTTCCTATGGATGGACACCATCAACAGGCTTC
TACGGAAGCAGGCACCCAAGCGACGAGGACGCATTCCAGCTGCAGAGACA
GCCGAAGCAGCTTCTGCAGAGCAGGAGGTCGCGGAACCCGAGAAACCGGA
CCCGACGATGGTGAGGTGGGTAAGTGGCCGCGAAGGCAGCCGAGTAGGTG
TGCCAGAAGAATGGCTCGGTATACCTGCAGGACGTGTCTTTGATGGCAAT
GGCTCGGGCAAGCTCGTGCAAGAGGTATAAAACCCCAGGTGAAAAAGCAC
CTGACGGCCGAGGAGCGCGCTATGCGTCGTGCCGAAATGGCTCGTCGTAG
AAAGAACCTCAGCGAGAAGCGGAATGAGGAGGAGAAGATGCTTTTGCGTC
GCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCCGAGCATGGATGCT
AACATGAACACCAGATCTACGAGAGCTGCCGCCCGGGCTGCTGTCTCCAC
CCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTGCACGGGAATTCCA
CTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTCCAGCAAACTTCGT
GAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAACCAGACGTTCGGT
TAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCTCGTACCAGCAGAC
CCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGAAGATGACCTGGAA
GACCAGGAAGAAGATGAGGTGGACGACGATGAAGATGCGCCAGGTGAAGA
CGACGATGACGTAGATGCCGATGGCGATTTAGACATGGATGATGCGCCGC
CGCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGCGGCAGCGGCAGCG
CCGAGCGGGAAGGCCGTCAAAAGTGTAGAGGCAAAAGAGATGGAACTGGA
TGATGACGACGAGGACGACGACGATGAGGAGCTCTCGGAGCTGGAGTCAG
ACGCTGAAGGCGAGCCAGACGATCAAGACGAAAGTATGATGGCCAATGGT
GGCGCAGAGGATTTAGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGA
CAGCGATGACGATACCCCGACCGCCGATCTGAGCAAGATGACCAAACGGC
AAAGGGGAAACCTGGGTAACGACTTCCTGCAACTTCCTATGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_336900M747DRAFT_336900Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_336900-T1M747DRAFT_336900-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_336900-T1.cdsM747DRAFT_336900-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_336900-T1.exon3M747DRAFT_336900-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_336900-T1.exon2M747DRAFT_336900-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_336900-T1.exon1M747DRAFT_336900-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR006880
DBxrefPFAM:PF04795
ProductPAPA-1-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:396237..397539 -
Powered by Drupal