You are here

Home

M747DRAFT_337419-T1, M747DRAFT_337419-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_337419-T1
Unique NameM747DRAFT_337419-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:494482..495601-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_337419-T1 ID=M747DRAFT_337419-T1|Name=M747DRAFT_337419-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1120bp|location=Sequence derived from alignment at KZ851901.1:494482..495601- (Aspergillus niger ATCC 13496)
ATGGGTGGTGTCACCGTTCGCGATGTCGACGTAAGTCATGTCATGTCAAC
TTTTGGAGATTGGTTGGTCGGTGCGGAATGGATGGGATATATGGCATGGC
ATGGTATGGCACGGCACGATCAGGACAAAATGAGAAGAAAAGAACGACAG
GAATGGGAAATACACATGGTATCGGCATTCAACGGAGCAGAAATCGACAT
TTTGATATCGAATTTGGGCGCATGCAGCAAAGCAAGCAAGGCTGGGTACA
TATACTCTGGGCATGAGATGTGATGAGTTTATGGGCTTGGAATGGGAATA
CGCAATGCACGACTACCACGATTGTGTACTCCAGCCATATATTATGGAAT
ATGGGAATTCTGGATGAAATGGATGTTATGGAGTCAGGAACGAACTGGAA
TTCCTGCCGCCGCGACACGCAGAGAAATGTCCAGATTTGCCGATACGTGC
CGTGCCATGCTATATGCCATATCATGCCTGAATGCGCACCTGCCAGACAA
TCTTCAATACACGATGCCTGTGGACGGATCAGCTAACAGGTTTCCTTTTC
CATGGTTATAGGCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAG
CGTCAGGGAAAGCTCCCCATTCCTGGTTCGTGCACACCGGATTTCATCGA
AAAGTCGTAACAATCAGATCAAAACTAATACGGTTATTAGGATGGGTTGA
CACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACT
GGTACGACAACTGCCATTGATCCAATACTTCGAAAAAAAAAAAAAAAAAA
AAACAGCGTGATTAATAGAAATCTGCAATAGGTACTACGTCCGCGCCGCT
GCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTCT
CCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCACC
ACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGAG
AAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCAC
CCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGACG
AGGAGGAGGACGAGGAGTAA
back to top

Coding sequence (CDS) from alignment at KZ851901.1:494482..495601-

>M747DRAFT_337419-T1 ID=M747DRAFT_337419-T1|Name=M747DRAFT_337419-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1776bp|location=Sequence derived from alignment at KZ851901.1:494482..495601- (Aspergillus niger ATCC 13496)
GTACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGA
CCGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGC
GGCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAA
GGTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGA
AGGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATC
GCCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGAC
ACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTG
GCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAA
GCTCCCCATTCCTGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTA
CGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCG
GTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCC
CGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCAT
CCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTG
GCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAG
ACCACCGTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTC
AAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAG
AAGTTCATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCC
CATTCCTGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTACGTCCG
CGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTG
GCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCC
GCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTC
CCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCC
GCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACC
GTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTCAAGACC
TCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAGAAGTTC
ATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCC
TGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTACGTCCGCGCCGC
TGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTC
TCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCAC
CACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGA
GAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCA
CCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGAC
GAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTCAAGACCTCCTGC
TCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAGAAGTTCATCGCT
GCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGATGG
GTGGTGTCACCGTTCGCGATGTCGAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS19M747DRAFT_337419Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_337419-T1M747DRAFT_337419-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_337419-T1.cdsM747DRAFT_337419-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_337419-T1.exon4M747DRAFT_337419-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_337419-T1.exon3M747DRAFT_337419-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_337419-T1.exon2M747DRAFT_337419-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_337419-T1.exon1M747DRAFT_337419-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR038111
DBxrefInterPro:IPR001266
DBxrefPFAM:PF01090
Product40S ribosomal protein S19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:494482..495601 -
Powered by Drupal