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M747DRAFT_337561-T1, M747DRAFT_337561-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_337561-T1
Unique NameM747DRAFT_337561-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:952589..953588-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_337561-T1 ID=M747DRAFT_337561-T1|Name=M747DRAFT_337561-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1000bp|location=Sequence derived from alignment at KZ851901.1:952589..953588- (Aspergillus niger ATCC 13496)
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACGTAAGT
CAATACATTCTCTCCCATCTCTTCTTCCTCCGAACCCGCATCGCAACAAA
CCCATATAGCAGTAACATAAACTGACCACCAGCTCACAGAGTCTACGTAC
TACTCCCCCCAGCGTTACCCCCTACTCACACCGCATCTCTAACACCTATG
AAACGAAATAGGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTA
AAAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAAT
CGTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCTTTTGTTGTGTTCG
ACACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAA
CTCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATAT
GACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGAC
GGAGGTTGGCTGAGAAGGGTATGCATATTTCCTTCTGTCTATTTTATCGT
TTTTGGTCCGGATGGGAAGGCTAATGTGTCATGTGGTTGGTGTTTGGTGT
AGAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGC
GACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAG
GGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGA
CGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATA
CTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTC
CAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTA
CGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGC
CTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGA
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Coding sequence (CDS) from alignment at KZ851901.1:952589..953588-

>M747DRAFT_337561-T1 ID=M747DRAFT_337561-T1|Name=M747DRAFT_337561-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3024bp|location=Sequence derived from alignment at KZ851901.1:952589..953588- (Aspergillus niger ATCC 13496)
AACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGCGA
CCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAGGG
CGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGACG
AGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATACT
GCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTCCA
GGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTACG
AGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGCCT
ATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGAGT
CCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAGAAGCCCTGG
AAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTCGCGAAAACG
AACCTCAAGGCAAAAGGGCAGGCTTTTGTTGTGTTCGACACCGTGGAGGC
GGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCTTCGACAAAC
CGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACGGTGTTGCGT
GAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAGGTTGGCTGA
GAAGGAGTCTACATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAA
CTGCACAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTC
AAGCGACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGC
CAAGGGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTC
CGGACGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCC
GATACTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGG
ATTCCAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCG
AGTACGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGG
ATGCCTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACA
ATGAGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAGAAG
CCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTCGCG
AAAACGAACCTCAAGGCAAAAGGGCAGGCTTTTGTTGTGTTCGACACCGT
GGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCTTCG
ACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACGGTG
TTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAGGTT
GGCTGAGAAGGAGTCTACATGGCGACCATAACAGCGCCCACCCCGATACC
CCCCAACTGCACAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAA
AAGCTCAAGCGACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAA
AACCGCCAAGGGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGG
TTATTCCGGACGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGAC
TTGCCCGATACTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTT
CGAAGGATTCCAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGT
TCGTCGAGTACGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACG
TCGGGGATGCCTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCA
GAGACAATGAGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAA
AAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATC
GTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCTTTTGTTGTGTTCGA
CACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAAC
TCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATG
ACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACG
GAGGTTGGCTGAGAAGGAGTCTACATGGCGACCATAACAGCGCCCACCCC
GATACCCCCCAACTGCACAACGCAAACAAGCGCACGAAGCCCTCGAAGCT
CAGAAAAAGCTCAAGCGACCCCCCGGTGCTCCTACGGAACCTGGCCGTCC
TGCGAAAACCGCCAAGGGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGG
CGGCGGTTATTCCGGACGAGTATCTGCCCCCGAACAAGATTCTCTTCTTG
CGCGACTTGCCCGATACTGCGGATCAGGACAGTCTGACGGCTGTGTTCGG
TCGGTTCGAAGGATTCCAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTA
TTGCGTTCGTCGAGTACGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAG
GCGACGTCGGGGATGCCTATGGGAGAGGCTGGGAAGCCGATTCGGGTTAC
TTACCAGAGACAATGAGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACC
AGCTAAAAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTT
GAAATCGTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCTTTTGTTGT
GTTCGACACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCT
TCGAACTCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGT
GATATGACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAA
GAGACGGAGGTTGGCTGAGAAGGAGTCTACATGGCGACCATAACAGCGCC
CACCCCGATACCCCCCAACTGCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_337561M747DRAFT_337561Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_337561-T1M747DRAFT_337561-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_337561-T1.cdsM747DRAFT_337561-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_337561-T1.exon4M747DRAFT_337561-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_337561-T1.exon3M747DRAFT_337561-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_337561-T1.exon2M747DRAFT_337561-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_337561-T1.exon1M747DRAFT_337561-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductU1 small nuclear ribonucleo protein usp102
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:952589..953588 -
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