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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:238948..239560- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_338108-T1 ID=M747DRAFT_338108-T1|Name=M747DRAFT_338108-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=613bp|location=Sequence derived from alignment at KZ851903.1:238948..239560- (Aspergillus niger ATCC 13496)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGTAGGTGTCTTTAGCTCTTCATCAACGTGGGAATTCATTCTATGATTT
TGCTGGATATATTTCCATGCTCAATCTTGATAAAGTATACTGCTACTGAG
CATAAGATGAGATACTAAGTGGCTTTTGTCAGGGTTACGCGTTGATCGAA
TACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGGATC
CAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGCCAC
CCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGTGGA
CGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGAGGA
GGCTAGAGACTAG back to topCoding sequence (CDS) from alignment at KZ851903.1:238948..239560- >M747DRAFT_338108-T1 ID=M747DRAFT_338108-T1|Name=M747DRAFT_338108-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=966bp|location=Sequence derived from alignment at KZ851903.1:238948..239560- (Aspergillus niger ATCC 13496)
GGTTACGCGTTGATCGAATACTCCACCCTCCCCGAAGCCTCGGAAGCCAT
CAAGGCTTTGAACGGATCCAAATTGCTGGACCAGACAATCCAGGTCGACT
TCGCGTTTGTCCGGCCACCCCCATCAAACAAAGGAAAGAACGCTGGACAA
AGAGGTGGCCGTGGTGGACGGGGACGCAGCAGGAGCCGGGATAGGAGTCG
CAGCCCTGGAGCGGAGGAGGCTAGAGACTAGATGTCTACAGAAATGGAAG
TCGACCCTCCCGTGGCGCAGGAGGAGGAGGTCCCCGCGCAGTCGGGCAAC
AATACCTCTGATCCGAGAACGCAAGCGTCAGCTGTTGCAGTGCGCAGTAT
CGAAGGATGGATCATCATCGCGACCAATATTCATGAAGAGGCCTCTGAGG
AGGACGTGACGGATCTGTTTGCTGAATATGGAGAGATCAAGAACTTCAAT
TTGAACCTCGATCGCCGGACGGGTTATGTGAAGGGTTACGCGTTGATCGA
ATACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGGAT
CCAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTCCGGCCA
CCCCCATCAAACAAAGGAAAGAACGCTGGACAAAGAGGTGGCCGTGGTGG
ACGGGGACGCAGCAGGAGCCGGGATAGGAGTCGCAGCCCTGGAGCGGAGG
AGGCTAGAGACTAGATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCG
CAGGAGGAGGAGGTCCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAG
AACGCAAGCGTCAGCTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCA
TCGCGACCAATATTCATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTG
TTTGCTGAATATGGAGAGATCAAGAACTTCAATTTGAACCTCGATCGCCG
GACGGGTTATGTGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003729 | mRNA binding |
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR033744 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR008111 |
| DBxref | PFAM:PF00076 |
| Product | RNA-binding domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:238948..239560 - |
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