|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:552634..554931- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_338209-T1 ID=M747DRAFT_338209-T1|Name=M747DRAFT_338209-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2298bp|location=Sequence derived from alignment at KZ851903.1:552634..554931- (Aspergillus niger ATCC 13496)
ATGACTGCTGTGGCATCACCACCTAGTGTGCAATCGGGCCCTCACTTGGG
ATGGTTCGACTCTGGTAACGGGGGACAAGGTGCTCTGTCTTCAATGGACG
CGGAAGAAGTTTCACGCACATTTTTGCCGCGAAGGACTGTTCAGAGATCG
AATTCCTCCTCTTCCCTAGCATCTACTTCATCAACCTCGACCGCTATAGT
TACGCCGCAACCCCCTAATGCGGGACACATGAACAACGTTGAACACGCTA
CATGGTCAGCAAAGAAGAAACCCTCAAGAAATAACTGGACAAATTCTAAG
TCAGAGCCGGTGGCTGGGCTGAGCAACGCCCGCTCCCAGGCCATGCCGGC
CTTTTCTTCGGGCCCAGGAGCCTCTTCTACTATGACCGCGATCCACCAGC
CGTCTTCCATTGTTCCATCTCAACACATGCTTCAAGCATCACAGCAAAAT
GGCGTACGCGCCGCAAGCGCACCAGCAGGCGACCCCCCCGCCATCCTTAC
ACTCCTACCCATCAACGGTACCTTCGACAAGAAGCAGATCAACGTACCGT
TTTATCCGGATCTACTACGCATAGGTCGCCAGACAAATGCCAAGACCGTG
CCAACACCGGTGAACGGCTACTTCGATTCCAAGGTGCTGTCTCGGCAGCA
CGCCGAAATCTGGGCAGACAAAAGCGGAAAGATCTGGATCAGGGATGTTA
AGTCCTCAAATGGTACATTCGTTAATGGGCAGCGGCTGTCTCCAGAGAAC
CGCGAATCAGAGCCCCATGAGCTTCGCGAGAACGATACTTTAGAGCTGGG
AATTGATATCGTCAGCGAGGACCAGAAAACGGTTGTCCATCATAAGGTTT
CCGCCAAGGTTGAGCATGCCGGCGTATACAGCAGCATTCCGAATATTCTG
GACCTCACCCTAGGCGACTTGGATCCTGCTTCTGGAAATGGACTGCTCCC
GTCTCCCCTTAGTCAACCGATGTCGCATCTCAGGGGGCGATCGGGAAGCA
ACATGAGCAACCGCAGTGCCCAGAGTGCAGCTAGCAGCCAATTCAACGCA
ATTCAACAACAACGTCAGATGAACTACTGGAATTCACCTATATCTATTGA
ACAAGTTGTCAAGCGACTTACGGTATGTCATTCGGATCACATTCGCAGCG
AGCTTGCTCTAACGAGTTTTCAGAGTGAAATGAAACAGGCTAAACAGCAA
TCTCAAGAGCTCCGGCAAACCGACGAGTTCTTGACTGCCATAATGAAACC
CGGATATGTGGAGAAGGAGAAAGCGAAGCCTCCACCAGTGGATAACAACG
CTCCCCGTCCAGTAAACGGGCGGCCAAAGATGCCTCGCGTAGATTCTTTC
TCTCGCTTTTCCGACCCTCCAGCTCCTCCACCGCAACAACCATTGCCCGA
AAAGCCCGATGCTTTGCCGCGGAATGGCACAGACGCCCTATCGCCGTTGA
AGCGATCCGAGACAGAAAAGTCTAAGCTTGGCCCCAACTCGCCTGTTACA
CGTGAGAATAGCCAGATCTTGTCCCTCATTGAGGCTCTGTCCTCCGCCAA
AAGGGAGCTCGATAGCCAGGGCGCTCGTGTCAAGGAGCTTGAAGCGTTAC
TTATTCAGGAAAGAAATGCTCGCGAATCTGCTGAGGAGAAGGCCCGGAGC
CTGGAAATGAAATCCACTCAATTTGCTCCAGGCCCAACCGCAGATGCCGA
ACCTGAAGACGATAGCACCAAGAAACCGACTGAAATGGAAGAGCCAAAGA
CTATGCCGCCGGATGCCGACATTTCAACCGATTCCGATGCACCCACTTCT
GAAAAGCAGTCTTTGGCAGAAAGCCAAACAGATGTTTTACAACGTCGTCT
CGAGTCAATGATACTGGAGATGGAGGAGATGAAGAAGCAAGTCACGATGT
TCAAAGACCGGGCAGATGTCGCGGAGAATGAGGCTGTCGAGGCGCGGAAG
TCGCTGGCGGAGATGATTGAAACTTTGCGGCAAGAGCGCGCAGAGCGTGC
TCAGGGCAACGCAGTGTCCGGTGCGCAGACAGATGCTCCTGCTTCTGCTG
GTTCTTCATCTGAGCCGCGAGAGTCTGCCGAAGAGACAGGCAGCGTGTGC
GCCGAGCAATCACAGCCCACCACTGCGACGCCGTCAGGTACAAAAGCGGT
GGACAATGCAGATACGACATTTGCGACACAATCACACCGCCATGACGTCT
TGGAGCAATCCAGTCCATTTGCGTCTATGCTTGGAGTGGTGCTTCTAGGC
GTTGGGTTGATGGCTTACCTGAATGGCTGGCAGAAGATGGACAAATGA back to topCoding sequence (CDS) from alignment at KZ851903.1:552634..554931- >M747DRAFT_338209-T1 ID=M747DRAFT_338209-T1|Name=M747DRAFT_338209-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4494bp|location=Sequence derived from alignment at KZ851903.1:552634..554931- (Aspergillus niger ATCC 13496)
AGTGAAATGAAACAGGCTAAACAGCAATCTCAAGAGCTCCGGCAAACCGA
CGAGTTCTTGACTGCCATAATGAAACCCGGATATGTGGAGAAGGAGAAAG
CGAAGCCTCCACCAGTGGATAACAACGCTCCCCGTCCAGTAAACGGGCGG
CCAAAGATGCCTCGCGTAGATTCTTTCTCTCGCTTTTCCGACCCTCCAGC
TCCTCCACCGCAACAACCATTGCCCGAAAAGCCCGATGCTTTGCCGCGGA
ATGGCACAGACGCCCTATCGCCGTTGAAGCGATCCGAGACAGAAAAGTCT
AAGCTTGGCCCCAACTCGCCTGTTACACGTGAGAATAGCCAGATCTTGTC
CCTCATTGAGGCTCTGTCCTCCGCCAAAAGGGAGCTCGATAGCCAGGGCG
CTCGTGTCAAGGAGCTTGAAGCGTTACTTATTCAGGAAAGAAATGCTCGC
GAATCTGCTGAGGAGAAGGCCCGGAGCCTGGAAATGAAATCCACTCAATT
TGCTCCAGGCCCAACCGCAGATGCCGAACCTGAAGACGATAGCACCAAGA
AACCGACTGAAATGGAAGAGCCAAAGACTATGCCGCCGGATGCCGACATT
TCAACCGATTCCGATGCACCCACTTCTGAAAAGCAGTCTTTGGCAGAAAG
CCAAACAGATGTTTTACAACGTCGTCTCGAGTCAATGATACTGGAGATGG
AGGAGATGAAGAAGCAAGTCACGATGTTCAAAGACCGGGCAGATGTCGCG
GAGAATGAGGCTGTCGAGGCGCGGAAGTCGCTGGCGGAGATGATTGAAAC
TTTGCGGCAAGAGCGCGCAGAGCGTGCTCAGGGCAACGCAGTGTCCGGTG
CGCAGACAGATGCTCCTGCTTCTGCTGGTTCTTCATCTGAGCCGCGAGAG
TCTGCCGAAGAGACAGGCAGCGTGTGCGCCGAGCAATCACAGCCCACCAC
TGCGACGCCGTCAGGTACAAAAGCGGTGGACAATGCAGATACGACATTTG
CGACACAATCACACCGCCATGACGTCTTGGAGCAATCCAGTCCATTTGCG
TCTATGCTTGGAGTGGTGCTTCTAGGCGTTGGGTTGATGGCTTACCTGAA
TGGCTGGCAGAAGATGGACAAATGAATGACTGCTGTGGCATCACCACCTA
GTGTGCAATCGGGCCCTCACTTGGGATGGTTCGACTCTGGTAACGGGGGA
CAAGGTGCTCTGTCTTCAATGGACGCGGAAGAAGTTTCACGCACATTTTT
GCCGCGAAGGACTGTTCAGAGATCGAATTCCTCCTCTTCCCTAGCATCTA
CTTCATCAACCTCGACCGCTATAGTTACGCCGCAACCCCCTAATGCGGGA
CACATGAACAACGTTGAACACGCTACATGGTCAGCAAAGAAGAAACCCTC
AAGAAATAACTGGACAAATTCTAAGTCAGAGCCGGTGGCTGGGCTGAGCA
ACGCCCGCTCCCAGGCCATGCCGGCCTTTTCTTCGGGCCCAGGAGCCTCT
TCTACTATGACCGCGATCCACCAGCCGTCTTCCATTGTTCCATCTCAACA
CATGCTTCAAGCATCACAGCAAAATGGCGTACGCGCCGCAAGCGCACCAG
CAGGCGACCCCCCCGCCATCCTTACACTCCTACCCATCAACGGTACCTTC
GACAAGAAGCAGATCAACGTACCGTTTTATCCGGATCTACTACGCATAGG
TCGCCAGACAAATGCCAAGACCGTGCCAACACCGGTGAACGGCTACTTCG
ATTCCAAGGTGCTGTCTCGGCAGCACGCCGAAATCTGGGCAGACAAAAGC
GGAAAGATCTGGATCAGGGATGTTAAGTCCTCAAATGGTACATTCGTTAA
TGGGCAGCGGCTGTCTCCAGAGAACCGCGAATCAGAGCCCCATGAGCTTC
GCGAGAACGATACTTTAGAGCTGGGAATTGATATCGTCAGCGAGGACCAG
AAAACGGTTGTCCATCATAAGGTTTCCGCCAAGGTTGAGCATGCCGGCGT
ATACAGCAGCATTCCGAATATTCTGGACCTCACCCTAGGCGACTTGGATC
CTGCTTCTGGAAATGGACTGCTCCCGTCTCCCCTTAGTCAACCGATGTCG
CATCTCAGGGGGCGATCGGGAAGCAACATGAGCAACCGCAGTGCCCAGAG
TGCAGCTAGCAGCCAATTCAACGCAATTCAACAACAACGTCAGATGAACT
ACTGGAATTCACCTATATCTATTGAACAAGTTGTCAAGCGACTTACGAGT
GAAATGAAACAGGCTAAACAGCAATCTCAAGAGCTCCGGCAAACCGACGA
GTTCTTGACTGCCATAATGAAACCCGGATATGTGGAGAAGGAGAAAGCGA
AGCCTCCACCAGTGGATAACAACGCTCCCCGTCCAGTAAACGGGCGGCCA
AAGATGCCTCGCGTAGATTCTTTCTCTCGCTTTTCCGACCCTCCAGCTCC
TCCACCGCAACAACCATTGCCCGAAAAGCCCGATGCTTTGCCGCGGAATG
GCACAGACGCCCTATCGCCGTTGAAGCGATCCGAGACAGAAAAGTCTAAG
CTTGGCCCCAACTCGCCTGTTACACGTGAGAATAGCCAGATCTTGTCCCT
CATTGAGGCTCTGTCCTCCGCCAAAAGGGAGCTCGATAGCCAGGGCGCTC
GTGTCAAGGAGCTTGAAGCGTTACTTATTCAGGAAAGAAATGCTCGCGAA
TCTGCTGAGGAGAAGGCCCGGAGCCTGGAAATGAAATCCACTCAATTTGC
TCCAGGCCCAACCGCAGATGCCGAACCTGAAGACGATAGCACCAAGAAAC
CGACTGAAATGGAAGAGCCAAAGACTATGCCGCCGGATGCCGACATTTCA
ACCGATTCCGATGCACCCACTTCTGAAAAGCAGTCTTTGGCAGAAAGCCA
AACAGATGTTTTACAACGTCGTCTCGAGTCAATGATACTGGAGATGGAGG
AGATGAAGAAGCAAGTCACGATGTTCAAAGACCGGGCAGATGTCGCGGAG
AATGAGGCTGTCGAGGCGCGGAAGTCGCTGGCGGAGATGATTGAAACTTT
GCGGCAAGAGCGCGCAGAGCGTGCTCAGGGCAACGCAGTGTCCGGTGCGC
AGACAGATGCTCCTGCTTCTGCTGGTTCTTCATCTGAGCCGCGAGAGTCT
GCCGAAGAGACAGGCAGCGTGTGCGCCGAGCAATCACAGCCCACCACTGC
GACGCCGTCAGGTACAAAAGCGGTGGACAATGCAGATACGACATTTGCGA
CACAATCACACCGCCATGACGTCTTGGAGCAATCCAGTCCATTTGCGTCT
ATGCTTGGAGTGGTGCTTCTAGGCGTTGGGTTGATGGCTTACCTGAATGG
CTGGCAGAAGATGGACAAATGAATGACTGCTGTGGCATCACCACCTAGTG
TGCAATCGGGCCCTCACTTGGGATGGTTCGACTCTGGTAACGGGGGACAA
GGTGCTCTGTCTTCAATGGACGCGGAAGAAGTTTCACGCACATTTTTGCC
GCGAAGGACTGTTCAGAGATCGAATTCCTCCTCTTCCCTAGCATCTACTT
CATCAACCTCGACCGCTATAGTTACGCCGCAACCCCCTAATGCGGGACAC
ATGAACAACGTTGAACACGCTACATGGTCAGCAAAGAAGAAACCCTCAAG
AAATAACTGGACAAATTCTAAGTCAGAGCCGGTGGCTGGGCTGAGCAACG
CCCGCTCCCAGGCCATGCCGGCCTTTTCTTCGGGCCCAGGAGCCTCTTCT
ACTATGACCGCGATCCACCAGCCGTCTTCCATTGTTCCATCTCAACACAT
GCTTCAAGCATCACAGCAAAATGGCGTACGCGCCGCAAGCGCACCAGCAG
GCGACCCCCCCGCCATCCTTACACTCCTACCCATCAACGGTACCTTCGAC
AAGAAGCAGATCAACGTACCGTTTTATCCGGATCTACTACGCATAGGTCG
CCAGACAAATGCCAAGACCGTGCCAACACCGGTGAACGGCTACTTCGATT
CCAAGGTGCTGTCTCGGCAGCACGCCGAAATCTGGGCAGACAAAAGCGGA
AAGATCTGGATCAGGGATGTTAAGTCCTCAAATGGTACATTCGTTAATGG
GCAGCGGCTGTCTCCAGAGAACCGCGAATCAGAGCCCCATGAGCTTCGCG
AGAACGATACTTTAGAGCTGGGAATTGATATCGTCAGCGAGGACCAGAAA
ACGGTTGTCCATCATAAGGTTTCCGCCAAGGTTGAGCATGCCGGCGTATA
CAGCAGCATTCCGAATATTCTGGACCTCACCCTAGGCGACTTGGATCCTG
CTTCTGGAAATGGACTGCTCCCGTCTCCCCTTAGTCAACCGATGTCGCAT
CTCAGGGGGCGATCGGGAAGCAACATGAGCAACCGCAGTGCCCAGAGTGC
AGCTAGCAGCCAATTCAACGCAATTCAACAACAACGTCAGATGAACTACT
GGAATTCACCTATATCTATTGAACAAGTTGTCAAGCGACTTACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008984 |
| DBxref | InterPro:IPR000253 |
| DBxref | PFAM:PF00498 |
| Product | cytoplasm to vacuole targeting Vps64 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:552634..554931 - |
|
