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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851905.1:573876..575246- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_338904-T1 ID=M747DRAFT_338904-T1|Name=M747DRAFT_338904-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1371bp|location=Sequence derived from alignment at KZ851905.1:573876..575246- (Aspergillus niger ATCC 13496)
ATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAG
CCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGT
CTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGTGGGTT
GGATGGAGGAGCCCCAAAGGTCTCAATCGATGATGATCTATCTCGGATTT
CTGGAGAAGCTATTAATCCGGTGCAGACCCCAAGACGGTTTAGTGTCCCG
TAGGCGGTCTGCAACTCTTCCCCATCACGGGACTTCGGCTTGCCCTGGGG
TGGTCCGGCTCGCTAAGCGTCCCGTTTGGGGTTAGGGCGAGCCGCACCGA
ACACACCTCGCAATTTGTGAGCCTTGTGCGTTGTCCCGTTACCCTATCGA
AGCGACGACAACCACGACAACCCGGACGACTTTTGCGGGTCATACCTCCC
TTCCTTCGACTTGTTTGCGTTGCCCGCTGCTGCTCAGAGAAACGCCGTCA
GAATGCCTTCGGAACAAGGTCACAGACGTGAGTGCCATCATTTTCCGGAT
ATCAGACATGTGTGCGCGATGGTTGGAATATGGGGATGCCGGAGGATAGA
TGGGAATTTGCGGGCGCAACCTGGGCGAAGTGCTGAATGAAATGCTAACT
CGAGATTTTTGCGAAATATAGTCTATGTCAAGTAAGTTTACCACAAACCG
TCCGCCGTCGAATCCGCGCACATTCCGGATATGAATATCAAAAATATCAA
AATACATGTCGGGACATCAGAGATACGGGCCAAGCGAAGGAATGCAACGA
GAACAGACCGGTTAATACGAATTCTTTCTACAGGGGTCGCCACGTGAGCT
ACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGGTACTTGCGATCC
GCACCGATATCGATATAGAGGAACAAGGGAATCTGACACATGGGTTATCT
AGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGTGAGT
AGCGAACGGGTTCGGAATGGGAATATCAGAACACACAGCTAAGACGACAT
TCTTTTACAGCTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCC
AAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTAC
CCGTCCCCACGGTATGTGATGCTCAGCTCCAATGCGCGATGATTACGATG
GAATATTTCAATACTATCGGTGATTGTTGGAACCGAGAACGGCGGGAAAC
TAACGATATTTCCTCATGAACAGGTAACTCCGGTGTTGTCCGTGCTCAGT
TCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATG
CTGTACCCCTCCAACATCTAA back to topCoding sequence (CDS) from alignment at KZ851905.1:573876..575246- >M747DRAFT_338904-T1 ID=M747DRAFT_338904-T1|Name=M747DRAFT_338904-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2190bp|location=Sequence derived from alignment at KZ851905.1:573876..575246- (Aspergillus niger ATCC 13496)
GTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAG
ACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAACT
TCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTC
CGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGT
CTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGGGTCGCCA
CGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGATGGG
TGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAA
AGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCG
GACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGTAACTCCGGTG
TTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCT
ACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAACTTCTACCTGGGCA
AGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAAC
ATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTCTGATCAAGATC
GACGGTGTTGAGAGCACCGAGGCCGCAAAGGGTCGCCACGTGAGCTACCA
GCGCTCCAAGCGTACCGTCAACCCCAACACCAGATGGGTGGAAAGAAATC
CGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGC
CGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGC
CCGGACGGCAAAATTGGCCAGGTGGGGTAACTCCGGTGTTGTCCGTGCTC
AGTTCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTT
ATGCTGTACCCCTCCAACATCTAACTTCTACCTGGGCAAGAAGGTTGCTT
TCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATC
TGGGGCAAGGTTACCCGTCCCCACGTCTGATCAAGATCGACGGTGTTGAG
AGCACCGAGGCCGCAAAGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCG
TACCGTCAACCCCAACACCAGATGGGTGGAAAGAAATCCGCAAGCTGTTT
TGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGGG
GACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAAA
ATTGGCCAGGTGGGGTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACA
ACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCC
TCCAACATCTAACTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGG
CCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTT
ACCCGTCCCCACGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCC
GCAAAGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCC
CAACACCAGATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGG
GCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTA
GCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTG
GGGTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCA
AGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAA
CTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGG
TCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCAC
GTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGGGTCGC
CACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGATG
GGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCA
AAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTT
CGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009000 |
| DBxref | InterPro:IPR018266 |
| DBxref | InterPro:IPR001780 |
| DBxref | InterPro:IPR038661 |
| DBxref | PFAM:PF01247 |
| Product | 60S ribosomal protein L33B |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851905.1 | supercontig | KZ851905.1:573876..575246 - |
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