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M747DRAFT_338934-T1, M747DRAFT_338934-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_338934-T1
Unique NameM747DRAFT_338934-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:653735..654646+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_338934-T1 ID=M747DRAFT_338934-T1|Name=M747DRAFT_338934-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=912bp|location=Sequence derived from alignment at KZ851905.1:653735..654646+ (Aspergillus niger ATCC 13496)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
AAAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCCGCACAGT
CCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGAC
CGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAAC
CTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGA
CGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGG
CGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAG
GCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGG
CAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTG
CGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCA
TGGAAGCAGTGA
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Coding sequence (CDS) from alignment at KZ851905.1:653735..654646+

>M747DRAFT_338934-T1 ID=M747DRAFT_338934-T1|Name=M747DRAFT_338934-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=912bp|location=Sequence derived from alignment at KZ851905.1:653735..654646+ (Aspergillus niger ATCC 13496)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
AAAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCCGCACAGT
CCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGAC
CGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAAC
CTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGA
CGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGG
CGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAG
GCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGG
CAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTG
CGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCA
TGGAAGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_338934M747DRAFT_338934Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_338934-T1.exon1M747DRAFT_338934-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_338934-T1.cdsM747DRAFT_338934-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_338934-T1M747DRAFT_338934-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092645TJ
DBxrefInterPro:IPR035100
DBxrefInterPro:IPR036575
DBxrefInterPro:IPR035441
DBxrefInterPro:IPR017923
DBxrefInterPro:IPR006289
DBxrefInterPro:IPR003617
DBxrefInterPro:IPR001222
DBxrefInterPro:IPR003618
DBxrefPFAM:PF07500
DBxrefPFAM:PF01096
DBxrefPFAM:PF08711
Producttranscription elongation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:653735..654646 +
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