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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851908.1:617577..619656+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_339854-T1 ID=M747DRAFT_339854-T1|Name=M747DRAFT_339854-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2080bp|location=Sequence derived from alignment at KZ851908.1:617577..619656+ (Aspergillus niger ATCC 13496)
ATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTATGTCTTGTTCTT
ATATTACTAACTGGCCCTTTCACCTATCTATCCCTTCAGTCAAACCCCCA
AAGGTCATTTAATGTTTCCCCTCCGCAGAGATCCTTCCCCGCACCTCATC
TCAAACCAACTCCAACTCACATATCTTCACCTCCAATAGCGTCACCGACC
TCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTG
CAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCG
CTTCGTAAGTCCGCTTCATCTCCCCCATCCTATAGATTCTCTGAACGGGA
AACTTACTCTGTATCCAGGAACAACATGAAATCCCCGGTAGTAGGGGCGA
GGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGGTGGGTTGACTTCTCC
TTTCTAACTTCATTCTCGCAACTGAGAATACTGAAACATCGGGATGATGT
GTAAACTAATATTGATTGGTACTAGAAAACCCACTCTGCCTCTATCACTG
CCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTG
ATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGT
AAGTGGTTAAATCGTCCTTTTCTTTTTCTTTCTCCTTCTTTTGAGACTTT
TGTGGTTCTTTACAGTGCTCTTTGTTGGGTTACCAAGGGATAGCAGCAGC
TAACGACTTATCAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACT
CCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGA
GAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGGTCGGAA
GGGCATAAGGGACGGAAATCACAAGTGTTTCTTGTATTATCATTTAATGA
GAAATGGAGTGTAGTTTAGCCTGTGTAAGCGACGATAGAGCCTAAGATTT
CTTTGATGCTGTGTATGGCTGTACAGGATTAGGATGGGGATGGAAAACTA
TGCCTATTTTAAACCACCTGATCTGAACAAGGTTTCAGGCCCGGATATTG
CCATATACAGCGAAATACCACCTCCAGAGAGAGAAAGAGAGCAACTGACC
CGGTGGGTGCACATTGAAGCTGATGAAATGCGGAGCGATATTGCAGTACT
CACAAGGCGGTGTCTTTGTGCAGCTTGTGATTGGGTGATACCCGCGTCTG
GCGGCATCACATTTTCGCGGACGGCATCAGCTCCGTCAAGTTGGCTCTGC
GATCTCCGATAGACTGCCCAGCTCTTTTACAGCACGCGATCAACTCAATT
TCACCTGGACGTGGAGACGGTCATTTTTTATTTCCATCATTACACGATTC
CTTTGGCGCGTCCATCTCCATCGACATCCATATTTTGCAAACTCCTGCTG
AGCAGCTGGCATTGATTTCAGACCACCAACCATGAGTGTTCGTACTCTCC
TATCCCTACTCCATTGACTCAAGCTTTATCTTCAGGCGTACACTTTTGTT
AATAAGGAGTAAACTGACTCTGCGAATCTAGTTCAACCCTGTCAACCCCC
GGCCTTTCCTCCAGGCTAGGTACGCACCCGGTCCCTTGTCGCTTGATCGC
CCCGCCGCAATCCTATCCTATAACTTCCAATTTCTATTGAAAAATATCCT
CTAATTCAAATCGCAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGG
GGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAA
CGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAA
CATTGGGTCTGGTCCTGATTAGGTGCGTTTACTCGGTCGCCTGATATCTC
GGGGGCTGGGGTTTCCTGATAGCAGTGCTGGGATCTGCGCATCCGTTACC
CCTCTTCGGAGATACACTTGGACGCATATTGGAAGGACATTTGCTAACGC
AATACGCTGATAGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGT
GTGGAAATGACGGACCTGGGACTACGATAG back to topCoding sequence (CDS) from alignment at KZ851908.1:617577..619656+ >M747DRAFT_339854-T1 ID=M747DRAFT_339854-T1|Name=M747DRAFT_339854-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5832bp|location=Sequence derived from alignment at KZ851908.1:617577..619656+ (Aspergillus niger ATCC 13496)
ATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGCGTCACCGACCTCCG
TCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAAT
GCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTC
GAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAA
ATGCAAGCTGTGCCAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCA
ACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATT
GACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGGTGAGTGGGA
AGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAG
AGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATC
AAGGAGATCAACTTTCAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCA
GGCTAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGG
AATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTC
CGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATTGGGTCT
GGTCCTGATTAGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTG
TGGAAATGACGGACCTGGGACTACGATAGATGCTTTCCCTCCTCCTGTCT
GCCGAACTCAGCGGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGA
GCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCC
ACCCCAACTGGGTCAGCTTCAACCGCTTCGAACAACATGAAATCCCCGGT
AGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGAAAAC
CCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGA
AGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTT
ACCGAGTTTAAGGCTGATGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTC
TACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACG
ATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGTTC
AACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGAGTCGGTACCGAGCT
CATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGA
GCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATT
GATGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGGTGTAACAA
CATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGAC
TACGATAGATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGCGTCACC
GACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAA
AGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCA
ACCGCTTCGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTT
GTCTGGAAATGCAAGCTGTGCCAGAAAACCCACTCTGCCTCTATCACTGC
CGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGA
TTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGGT
GAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGA
TTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGG
TTTCGATCAAGGAGATCAACTTTCAGTTCAACCCTGTCAACCCCCGGCCT
TTCCTCCAGGCTAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGG
CCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACG
TGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACA
TTGGGTCTGGTCCTGATTAGGTGTAACAACATCCTCTGGATGGGCTCTGC
GGACAGTGTGGAAATGACGGACCTGGGACTACGATAGATGCTTTCCCTCC
TCCTGTCTGCCGAACTCAGCGGCGTCACCGACCTCCGTCCCAAGGACACC
GAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCG
TGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCGAACAACATGAAA
TCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGC
CAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGC
GGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGAT
TGGAATTTACCGAGTTTAAGGCTGATGGTGAGTGGGAAGCGAAGGGAGCT
GAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTA
TGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACT
TTCAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGAGTCGGT
ACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAA
GCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAG
AGTTCATTGATGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGG
TGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGA
CCTGGGACTACGATAGATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCG
GCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTC
ACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGT
CAGCTTCAACCGCTTCGAACAACATGAAATCCCCGGTAGTAGGGGCGAGG
CGAACTTTGTCTGGAAATGCAAGCTGTGCCAGAAAACCCACTCTGCCTCT
ATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAA
GAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGG
CTGATGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACC
GGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGG
AGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGTTCAACCCTGTCAACC
CCCGGCCTTTCCTCCAGGCTAGAGTCGGTACCGAGCTCATCATCCGTCTG
AAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTA
CATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACA
CGGGAACATTGGGTCTGGTCCTGATTAGGTGTAACAACATCCTCTGGATG
GGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGACTACGATAGATGCT
TTCCCTCCTCCTGTCTGCCGAACTCAGCGGCGTCACCGACCTCCGTCCCA
AGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCACC
TCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCGAACA
ACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCA
AGCTGTGCCAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTC
TACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTG
CAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGGTGAGTGGGAAGCGA
AGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGAA
GAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGA
GATCAACTTTCAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTA
GAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAATAC
AAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCGTGA
TACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATTGGGTCTGGTCC
TGATTAGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAA
ATGACGGACCTGGGACTACGATAGATGCTTTCCCTCCTCCTGTCTGCCGA
ACTCAGCGGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCT
ACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCC
AACTGGGTCAGCTTCAACCGCTTCGAACAACATGAAATCCCCGGTAGTAG
GGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGAAAACCCACT
CTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGC
ACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTACCGA
GTTTAAGGCTGATGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTC
CTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAG
AAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGTTCAACCC
TGTCAACCCCCGGCCTTTCCTCCAGGCTAGAGTCGGTACCGAGCTCATCA
TCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATC
GATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGG
AAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGGTGTAACAACATCC
TCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGACTACGA
TAGATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGCGTCACCGACCT
CCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGC
AATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGC
TTCGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTG
GAAATGCAAGCTGTGCCAGAAAACCCACTCTGCCTCTATCACTGCCGGCC
CCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAG
ATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGGTGAGTG
GGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGT
CAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCG
ATCAAGGAGATCAACTTTCAGTTCAACCCTGTCAACCCCCGGCCTTTCCT
CCAGGCTAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAA
CGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTG
CTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATTGGG
TCTGGTCCTGATTAGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACA
GTGTGGAAATGACGGACCTGGGACTACGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000387 | spliceosomal snRNP assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09264X31 |
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR034100 |
| DBxref | InterPro:IPR008584 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| DBxref | PFAM:PF05907 |
| Product | DUF866 domain protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851908.1 | supercontig | KZ851908.1:617577..619656 + |
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