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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851911.1:363061..363581+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_340644-T1 ID=M747DRAFT_340644-T1|Name=M747DRAFT_340644-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=521bp|location=Sequence derived from alignment at KZ851911.1:363061..363581+ (Aspergillus niger ATCC 13496)
ATGAAGCTCGTCCGGTAAGCCAACCGCTGCAGATCGCGCCTGGTGCAGCT
GTGCCCGCGAAGATTGCACAGCGACTAATTCCTATCTGCACAGGTTTCTG
ATGAAGTGCGCCAACGAGACGGTGACGATTGAGCTGAAGAATGGTGAGTT
TCCTATCCCTTTATTTCTTCCAGCGCCTGAAGCTCCATCCATCTCAACAT
CAAATCTAACCACAAATAGGCACCATCCTCCACGGCACCATCACCTCCGT
CTCCCCCCAGATGAACACCTCCCTCCGCACGGTCAAAATGACCCCCAAAG
GCCGCGACCCCATCTCCCTCGACACCATCAACATCCGTGGCTCCACGATT
CGCTACTACATCCTGCCCGATAGTCTGCCCCTCGATACGCTGCTGATCGA
CGACACGCCCAAGCCGAAGAACAAGGCGCGCAAGGAAGCGGACCGCGGAG
GCCGTGGTGGTCGTGGTGGTCCTCGTGGTAGAGGGCGCGGTCGTGGCCGT
GGCCGTGGTCGTGGATTCTAA back to topCoding sequence (CDS) from alignment at KZ851911.1:363061..363581+ >M747DRAFT_340644-T1 ID=M747DRAFT_340644-T1|Name=M747DRAFT_340644-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1098bp|location=Sequence derived from alignment at KZ851911.1:363061..363581+ (Aspergillus niger ATCC 13496)
ATGAAGCTCGTCCGGTTTCTGATGAAGTGCGCCAACGAGACGGTGACGAT
TGAGCTGAAGAATGGCACCATCCTCCACGGCACCATCACCTCCGTCTCCC
CCCAGATGAACACCTCCCTCCGCACGGTCAAAATGACCCCCAAAGGCCGC
GACCCCATCTCCCTCGACACCATCAACATCCGTGGCTCCACGATTCGCTA
CTACATCCTGCCCGATAGTCTGCCCCTCGATACGCTGCTGATCGACGACA
CGCCCAAGCCGAAGAACAAGGCGCGCAAGGAAGCGGACCGCGGAGGCCGT
GGTGGTCGTGGTGGTCCTCGTGGTAGAGGGCGCGGTCGTGGCCGTGGCCG
TGGTCGTGGATTCTAAATGAAGCTCGTCCGGTTTCTGATGAAGTGCGCCA
ACGAGACGGTGACGATTGAGCTGAAGAATGGCACCATCCTCCACGGCACC
ATCACCTCCGTCTCCCCCCAGATGAACACCTCCCTCCGCACGGTCAAAAT
GACCCCCAAAGGCCGCGACCCCATCTCCCTCGACACCATCAACATCCGTG
GCTCCACGATTCGCTACTACATCCTGCCCGATAGTCTGCCCCTCGATACG
CTGCTGATCGACGACACGCCCAAGCCGAAGAACAAGGCGCGCAAGGAAGC
GGACCGCGGAGGCCGTGGTGGTCGTGGTGGTCCTCGTGGTAGAGGGCGCG
GTCGTGGCCGTGGCCGTGGTCGTGGATTCTAAATGAAGCTCGTCCGGTTT
CTGATGAAGTGCGCCAACGAGACGGTGACGATTGAGCTGAAGAATGGCAC
CATCCTCCACGGCACCATCACCTCCGTCTCCCCCCAGATGAACACCTCCC
TCCGCACGGTCAAAATGACCCCCAAAGGCCGCGACCCCATCTCCCTCGAC
ACCATCAACATCCGTGGCTCCACGATTCGCTACTACATCCTGCCCGATAG
TCTGCCCCTCGATACGCTGCTGATCGACGACACGCCCAAGCCGAAGAACA
AGGCGCGCAAGGAAGCGGACCGCGGAGGCCGTGGTGGTCGTGGTGGTCCT
CGTGGTAGAGGGCGCGGTCGTGGCCGTGGCCGTGGTCGTGGATTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000387 | spliceosomal snRNP assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265FL1 |
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR034102 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | mRNA splicing protein smd1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851911.1 | supercontig | KZ851911.1:363061..363581 + |
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