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M747DRAFT_342818-T1, M747DRAFT_342818-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_342818-T1
Unique NameM747DRAFT_342818-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:11062..11554-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_342818-T1 ID=M747DRAFT_342818-T1|Name=M747DRAFT_342818-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=493bp|location=Sequence derived from alignment at KZ851921.1:11062..11554- (Aspergillus niger ATCC 13496)
ATGCTCTTCTTCAGGTAAGAAAGCGCGCGAGATCCTCAAACAAGCACCAA
AGCGACCACAGCTAACTCCCCCTCCCTACGGGGATGACTATTTGGCAGCT
TCTTCAAGACCCTAACCAACCAAACGGTGACCATCGAACTCAAGAACGAC
ATTCGCATCCGCGGCACCCTCAAATCCGTCGACCAGTACCTGAACATTAA
GCTGGACGATGTGGACGTCCTGGATCTGGATAAATACCCGCACTTGTCGT
CCGTAAAGAATATGTTTATTCGTGGTAGTGTGGTGCGGTATGTTATGCTG
CCGAGGTCGGAGGTGGACATTGGGCTTTTGGAGGATGCGACGAGGAGAGG
TATGTTTCTTCATCCCTGTCCCCTTGATCTAATTGAAGGAACATGCTTAG
ATGTTTCTGTATGTGTGTGTTTGGTTGTATAAATTGCTAATGATTGGTTT
GGTATATATAGAAGCTGCGAACCAGGCTGGGAAAGCTCGGTGA
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Coding sequence (CDS) from alignment at KZ851921.1:11062..11554-

>M747DRAFT_342818-T1 ID=M747DRAFT_342818-T1|Name=M747DRAFT_342818-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=891bp|location=Sequence derived from alignment at KZ851921.1:11062..11554- (Aspergillus niger ATCC 13496)
AAGCTGCGAACCAGGCTGGGAAAGCTCGGTGACTTCTTCAAGACCCTAAC
CAACCAAACGGTGACCATCGAACTCAAGAACGACATTCGCATCCGCGGCA
CCCTCAAATCCGTCGACCAGTACCTGAACATTAAGCTGGACGATGTGGAC
GTCCTGGATCTGGATAAATACCCGCACTTGTCGTCCGTAAAGAATATGTT
TATTCGTGGTAGTGTGGTGCGGTATGTTATGCTGCCGAGGTCGGAGGTGG
ACATTGGGCTTTTGGAGGATGCGACGAGGAGAGATGCTCTTCTTCAGAAG
CTGCGAACCAGGCTGGGAAAGCTCGGTGACTTCTTCAAGACCCTAACCAA
CCAAACGGTGACCATCGAACTCAAGAACGACATTCGCATCCGCGGCACCC
TCAAATCCGTCGACCAGTACCTGAACATTAAGCTGGACGATGTGGACGTC
CTGGATCTGGATAAATACCCGCACTTGTCGTCCGTAAAGAATATGTTTAT
TCGTGGTAGTGTGGTGCGGTATGTTATGCTGCCGAGGTCGGAGGTGGACA
TTGGGCTTTTGGAGGATGCGACGAGGAGAGATGCTCTTCTTCAGAAGCTG
CGAACCAGGCTGGGAAAGCTCGGTGACTTCTTCAAGACCCTAACCAACCA
AACGGTGACCATCGAACTCAAGAACGACATTCGCATCCGCGGCACCCTCA
AATCCGTCGACCAGTACCTGAACATTAAGCTGGACGATGTGGACGTCCTG
GATCTGGATAAATACCCGCACTTGTCGTCCGTAAAGAATATGTTTATTCG
TGGTAGTGTGGTGCGGTATGTTATGCTGCCGAGGTCGGAGGTGGACATTG
GGCTTTTGGAGGATGCGACGAGGAGAGATGCTCTTCTTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LSM2M747DRAFT_342818Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_342818-T1M747DRAFT_342818-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_342818-T1.cdsM747DRAFT_342818-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_342818-T1.exon3M747DRAFT_342818-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_342818-T1.exon2M747DRAFT_342818-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_342818-T1.exon1M747DRAFT_342818-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR016654
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductU6 snRNA-associated Sm-like protein LSm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:11062..11554 -
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