You are here

Home

M747DRAFT_347123-T1, M747DRAFT_347123-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_347123-T1
Unique NameM747DRAFT_347123-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851967.1:14463..15430+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_347123-T1 ID=M747DRAFT_347123-T1|Name=M747DRAFT_347123-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=968bp|location=Sequence derived from alignment at KZ851967.1:14463..15430+ (Aspergillus niger ATCC 13496)
ATGGCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACAT
TGAGATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGT
CTCACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTC
ATCAACATTGGCAAGACCTGGTATGTTGATCAGGCAATATATTGCGCGCA
ACTCATTTAGGATCGCTGCCTAACACCGCGCGAAAACTTAGGGAGAAGAT
CCTCCTCGCTGCCCGTATCATCGCCGCCATCGACAACCCGGCCGACATCT
GTGTCATCTCCGCTCGTCCCTACGGCCAGCGTGCTGTCCTGAAGTTCGCC
TCCCACACCGGTGCTACCGCCATTGCTGGTCGTTTCACCCCCGGTAACTT
CACCAACTACATCACCCGCTCTTTCAAGGAGCCCCGCCTGATCATCGTCA
CCGACCCTCGCACCGACGCCCAGGCCATCAAGGAGGCCAGCTACGTCAAC
ATCCCCGTCATTGCCCTTTGCGACACTGACTCCCCCACCGACTTCGTTGA
CGTTGCTATCCCCACCAACAACAAGGGTCGCCACGCCATCGGTCTCGTCT
GGTGGCTCCTTGCCCGTGAGGTCCTCCGCCTCCGTGGTACCCTCGCTTCC
CGTGAGGTTGACTGGGACGTCGTTGTCGACCTGTACTTCTACCGTGACCC
CGAGGCTGAGGAGAACAAGGAGGTCGTCGAGGAGAAGGTTGCCAGCGCTG
AGGAGGTCGGTGCTGGTGCCATCGAGTCCGGCTTCGCTGGTGAGAACTGG
GATGTTGCCGGTGCCGGTGCCGGTGTTCCTGGCACTGCTTTCGCTGCTGC
TAGCGCTGCTGCTGGTGCTGCCAGCTGGGAGGCCGAGGGTGGCGACTGGG
CTGCCAGCTCTGCCGCTCCTGCTGGTGAGAGCTGGGCTGAGGCCCAGCCC
ACCGAGGCTAAGTGGTAA
back to top

Coding sequence (CDS) from alignment at KZ851967.1:14463..15430+

>M747DRAFT_347123-T1 ID=M747DRAFT_347123-T1|Name=M747DRAFT_347123-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1794bp|location=Sequence derived from alignment at KZ851967.1:14463..15430+ (Aspergillus niger ATCC 13496)
ATGGCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACAT
TGAGATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGT
CTCACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTC
ATCAACATTGGCAAGACCTGGGAGAAGATCCTCCTCGCTGCCCGTATCAT
CGCCGCCATCGACAACCCGGCCGACATCTGTGTCATCTCCGCTCGTCCCT
ACGGCCAGCGTGCTGTCCTGAAGTTCGCCTCCCACACCGGTGCTACCGCC
ATTGCTGGTCGTTTCACCCCCGGTAACTTCACCAACTACATCACCCGCTC
TTTCAAGGAGCCCCGCCTGATCATCGTCACCGACCCTCGCACCGACGCCC
AGGCCATCAAGGAGGCCAGCTACGTCAACATCCCCGTCATTGCCCTTTGC
GACACTGACTCCCCCACCGACTTCGTTGACGTTGCTATCCCCACCAACAA
CAAGGGTCGCCACGCCATCGGTCTCGTCTGGTGGCTCCTTGCCCGTGAGG
TCCTCCGCCTCCGTGGTACCCTCGCTTCCCGTGAGGTTGACTGGGACGTC
GTTGTCGACCTGTACTTCTACCGTGACCCCGAGGCTGAGGAGAACAAGGA
GGTCGTCGAGGAGAAGGTTGCCAGCGCTGAGGAGGTCGGTGCTGGTGCCA
TCGAGTCCGGCTTCGCTGGTGAGAACTGGGATGTTGCCGGTGCCGGTGCC
GGTGTTCCTGGCACTGCTTTCGCTGCTGCTAGCGCTGCTGCTGGTGCTGC
CAGCTGGGAGGCCGAGGGTGGCGACTGGGCTGCCAGCTCTGCCGCTCCTG
CTGGTGAGAGCTGGGCTGAGGCCCAGCCCACCGAGGCTAAGTGGTAAATG
GCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACATTGA
GATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGTCTC
ACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTCATC
AACATTGGCAAGACCTGGGAGAAGATCCTCCTCGCTGCCCGTATCATCGC
CGCCATCGACAACCCGGCCGACATCTGTGTCATCTCCGCTCGTCCCTACG
GCCAGCGTGCTGTCCTGAAGTTCGCCTCCCACACCGGTGCTACCGCCATT
GCTGGTCGTTTCACCCCCGGTAACTTCACCAACTACATCACCCGCTCTTT
CAAGGAGCCCCGCCTGATCATCGTCACCGACCCTCGCACCGACGCCCAGG
CCATCAAGGAGGCCAGCTACGTCAACATCCCCGTCATTGCCCTTTGCGAC
ACTGACTCCCCCACCGACTTCGTTGACGTTGCTATCCCCACCAACAACAA
GGGTCGCCACGCCATCGGTCTCGTCTGGTGGCTCCTTGCCCGTGAGGTCC
TCCGCCTCCGTGGTACCCTCGCTTCCCGTGAGGTTGACTGGGACGTCGTT
GTCGACCTGTACTTCTACCGTGACCCCGAGGCTGAGGAGAACAAGGAGGT
CGTCGAGGAGAAGGTTGCCAGCGCTGAGGAGGTCGGTGCTGGTGCCATCG
AGTCCGGCTTCGCTGGTGAGAACTGGGATGTTGCCGGTGCCGGTGCCGGT
GTTCCTGGCACTGCTTTCGCTGCTGCTAGCGCTGCTGCTGGTGCTGCCAG
CTGGGAGGCCGAGGGTGGCGACTGGGCTGCCAGCTCTGCCGCTCCTGCTG
GTGAGAGCTGGGCTGAGGCCCAGCCCACCGAGGCTAAGTGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS0M747DRAFT_347123Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_347123-T1.exon1M747DRAFT_347123-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_347123-T1.exon2M747DRAFT_347123-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_347123-T1.cdsM747DRAFT_347123-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_347123-T1M747DRAFT_347123-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023591
DBxrefInterPro:IPR027498
DBxrefInterPro:IPR018130
DBxrefInterPro:IPR032281
DBxrefInterPro:IPR005707
DBxrefInterPro:IPR001865
DBxrefPFAM:PF16122
Productstructural constituent of ribosome
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851967.1supercontigKZ851967.1:14463..15430 +
Powered by Drupal