You are here

Home

M747DRAFT_351912-T1, M747DRAFT_351912-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_351912-T1
Unique NameM747DRAFT_351912-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:183949..185390+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_351912-T1 ID=M747DRAFT_351912-T1|Name=M747DRAFT_351912-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1442bp|location=Sequence derived from alignment at KZ851917.1:183949..185390+ (Aspergillus niger ATCC 13496)
CAATTTGCATAACCACGGCAGCCCAGCAACAATCGTCGATACGCCTAGAT
CACTGGCTAATAAGGATGCACCATTTCGAGTTCAGTCTTACTTTAATGAC
TAAGCGTATCGCCTAGAGACATTATGCTCGAATTGAGGACACGTCCAGTG
GGACCTGAGGGCCTCTGCTATCTCTTGGATAGCGTTTCTCTTTCTCAAAA
GGGCATAGTTTTCGAATGAAATGATTATGCCTAGATCATATTCGATACCC
GAGACGATGCCTTTTAAAGCTGGCCTGCCCATGCCCCAGACTTCTCCGCG
CTTGAACTGTAGTCTTGCCCAAAGGAAACTTTTAGAGAAACCAAGGGAGA
GGAGACTTAAAGCTGCACACAATGGGGGTTGCAATTCGTTCAGGCTTTGA
ATATTACTATTACTACCCCTCTCTAGCAGCGGCGGTGATATTCATCATCT
GTTTCCTGCTAACCACGCTCTTGCACACGTTCCAGCTCGTCCGGACGAAA
ACATGGTTCTTTATACCGTTCCTTATCGGGGGCTACTGTGAGTCAAGACG
AAGATTATACAAAATATTGGGCACTTATTTCTAATGTGTTTGTTTCACTG
CAGTTGAATTTGTAGGCTACTGCGCCCGTGCCGTCTCTGCCAATCAATCC
CCCAATTGGACCATGGGCCCTTTCCTGATCAACTCGCTCCTTCCTCTGGT
TGCACCTGCGCTCTTTGCGGCTAGTATATATATGGAATTGGGGAGATTGA
TCATCGTTCTTCATGCTCAACAACACAGCCTCATTCGAGTGAAATGGTTG
ACCAAGATCTTCGTCACCGGTGATGTTCTATCATTTCTGCTTCAAGCTGG
AGGTAAGGAGCACTTGCAGTTGCCGAGAAATCGCTACAAACTCATGCTAA
ATCCTCAATCTTCGACCTGCAGGGGCTGGTCTCATGGGTAGTCACTCTAA
AAGCGGTACTGAAACCGGGTCGCATATCATTGTTGGCGGTCTCGTCGTCC
AGATTGTTTTCTTCGGTTTCTTCATCATAACCACCGCAATTTTCCACCAT
CGCATGCTACAAAGTCCGACACCATGCTCCCTTGAAATAAACTGGAAAAA
GCTCATCTGGGTATTGTACTCAGCTAGCGTGCTCATTCTTGTGCGGTCGA
TTTACCGTCTTATCGAGTATATCGAAGGGTTTGGGGGATATTTGCTTTCT
CATGAGGTGTACCTCTATGTATTTGACGCGTTGCTTATGTTTGCGGTCAT
GCTGATATTCCATGTCGTTCACCCGAGCGAGCTCAATGCTTGGTTGAAGT
CGGGCGGGCTAGTTAGCAAGGGGTTTCGGTTCGAAAGGCTGAACGGGAAT
TCGATACCCATCAGCTGAGACTATATTCATCATATACCCCTTTCTTATGA
TTTACTTGCTTCGCTGTCCAAATTTACTATGATTCTATTCCA
back to top

Coding sequence (CDS) from alignment at KZ851917.1:183949..185390+

>M747DRAFT_351912-T1 ID=M747DRAFT_351912-T1|Name=M747DRAFT_351912-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2583bp|location=Sequence derived from alignment at KZ851917.1:183949..185390+ (Aspergillus niger ATCC 13496)
ATGGGGGTTGCAATTCGTTCAGGCTTTGAATATTACTATTACTACCCCTC
TCTAGCAGCGGCGGTGATATTCATCATCTGTTTCCTGCTAACCACGCTCT
TGCACACGTTCCAGCTCGTCCGGACGAAAACATGGTTCTTTATACCGTTC
CTTATCGGGGGCTACTTTGAATTTGTAGGCTACTGCGCCCGTGCCGTCTC
TGCCAATCAATCCCCCAATTGGACCATGGGCCCTTTCCTGATCAACTCGC
TCCTTCCTCTGGTTGCACCTGCGCTCTTTGCGGCTAGTATATATATGGAA
TTGGGGAGATTGATCATCGTTCTTCATGCTCAACAACACAGCCTCATTCG
AGTGAAATGGTTGACCAAGATCTTCGTCACCGGTGATGTTCTATCATTTC
TGCTTCAAGCTGGAGGGGCTGGTCTCATGGGTAGTCACTCTAAAAGCGGT
ACTGAAACCGGGTCGCATATCATTGTTGGCGGTCTCGTCGTCCAGATTGT
TTTCTTCGGTTTCTTCATCATAACCACCGCAATTTTCCACCATCGCATGC
TACAAAGTCCGACACCATGCTCCCTTGAAATAAACTGGAAAAAGCTCATC
TGGGTATTGTACTCAGCTAGCGTGCTCATTCTTGTGCGGTCGATTTACCG
TCTTATCGAGTATATCGAAGGGTTTGGGGGATATTTGCTTTCTCATGAGG
TGTACCTCTATGTATTTGACGCGTTGCTTATGTTTGCGGTCATGCTGATA
TTCCATGTCGTTCACCCGAGCGAGCTCAATGCTTGGTTGAAGTCGGGCGG
GCTAGTTAGCAAGGGGTTTCGGTTCGAAAGGCTGAACGGGAATTCGATAC
CCATCAGCTGAATGGGGGTTGCAATTCGTTCAGGCTTTGAATATTACTAT
TACTACCCCTCTCTAGCAGCGGCGGTGATATTCATCATCTGTTTCCTGCT
AACCACGCTCTTGCACACGTTCCAGCTCGTCCGGACGAAAACATGGTTCT
TTATACCGTTCCTTATCGGGGGCTACTTTGAATTTGTAGGCTACTGCGCC
CGTGCCGTCTCTGCCAATCAATCCCCCAATTGGACCATGGGCCCTTTCCT
GATCAACTCGCTCCTTCCTCTGGTTGCACCTGCGCTCTTTGCGGCTAGTA
TATATATGGAATTGGGGAGATTGATCATCGTTCTTCATGCTCAACAACAC
AGCCTCATTCGAGTGAAATGGTTGACCAAGATCTTCGTCACCGGTGATGT
TCTATCATTTCTGCTTCAAGCTGGAGGGGCTGGTCTCATGGGTAGTCACT
CTAAAAGCGGTACTGAAACCGGGTCGCATATCATTGTTGGCGGTCTCGTC
GTCCAGATTGTTTTCTTCGGTTTCTTCATCATAACCACCGCAATTTTCCA
CCATCGCATGCTACAAAGTCCGACACCATGCTCCCTTGAAATAAACTGGA
AAAAGCTCATCTGGGTATTGTACTCAGCTAGCGTGCTCATTCTTGTGCGG
TCGATTTACCGTCTTATCGAGTATATCGAAGGGTTTGGGGGATATTTGCT
TTCTCATGAGGTGTACCTCTATGTATTTGACGCGTTGCTTATGTTTGCGG
TCATGCTGATATTCCATGTCGTTCACCCGAGCGAGCTCAATGCTTGGTTG
AAGTCGGGCGGGCTAGTTAGCAAGGGGTTTCGGTTCGAAAGGCTGAACGG
GAATTCGATACCCATCAGCTGAATGGGGGTTGCAATTCGTTCAGGCTTTG
AATATTACTATTACTACCCCTCTCTAGCAGCGGCGGTGATATTCATCATC
TGTTTCCTGCTAACCACGCTCTTGCACACGTTCCAGCTCGTCCGGACGAA
AACATGGTTCTTTATACCGTTCCTTATCGGGGGCTACTTTGAATTTGTAG
GCTACTGCGCCCGTGCCGTCTCTGCCAATCAATCCCCCAATTGGACCATG
GGCCCTTTCCTGATCAACTCGCTCCTTCCTCTGGTTGCACCTGCGCTCTT
TGCGGCTAGTATATATATGGAATTGGGGAGATTGATCATCGTTCTTCATG
CTCAACAACACAGCCTCATTCGAGTGAAATGGTTGACCAAGATCTTCGTC
ACCGGTGATGTTCTATCATTTCTGCTTCAAGCTGGAGGGGCTGGTCTCAT
GGGTAGTCACTCTAAAAGCGGTACTGAAACCGGGTCGCATATCATTGTTG
GCGGTCTCGTCGTCCAGATTGTTTTCTTCGGTTTCTTCATCATAACCACC
GCAATTTTCCACCATCGCATGCTACAAAGTCCGACACCATGCTCCCTTGA
AATAAACTGGAAAAAGCTCATCTGGGTATTGTACTCAGCTAGCGTGCTCA
TTCTTGTGCGGTCGATTTACCGTCTTATCGAGTATATCGAAGGGTTTGGG
GGATATTTGCTTTCTCATGAGGTGTACCTCTATGTATTTGACGCGTTGCT
TATGTTTGCGGTCATGCTGATATTCCATGTCGTTCACCCGAGCGAGCTCA
ATGCTTGGTTGAAGTCGGGCGGGCTAGTTAGCAAGGGGTTTCGGTTCGAA
AGGCTGAACGGGAATTCGATACCCATCAGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_351912M747DRAFT_351912Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351912-T1M747DRAFT_351912-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351912-T1.utr5p1M747DRAFT_351912-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351912-T1.exon1M747DRAFT_351912-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_351912-T1.exon2M747DRAFT_351912-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_351912-T1.exon3M747DRAFT_351912-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351912-T1.cdsM747DRAFT_351912-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351912-T1.utr3p1M747DRAFT_351912-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:183949..185390 +
Powered by Drupal