You are here

Home

M747DRAFT_352086-T1, M747DRAFT_352086-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_352086-T1
Unique NameM747DRAFT_352086-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:415506..416666-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_352086-T1 ID=M747DRAFT_352086-T1|Name=M747DRAFT_352086-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1161bp|location=Sequence derived from alignment at KZ851917.1:415506..416666- (Aspergillus niger ATCC 13496)
TTTAAGCGACACTTGGGAGTGCCACCTTCCTAAAGGCATGGCCATTGAAC
GAGCTTCATGCCATAATACAAACCATGTATCACGAAGTACAAAGGCATGG
AGGAACCGTTGCCTCCTTAAATGAATGGGCCGAGGGCATTGATCCGAGAA
CATATCGGAAGATGATACCTTGGCACCAGGATCTCATCAACGCATGTGGG
AGATATAAAACATATCTTGATATAATAAACCCGACTCATGAAGCCTACTT
TGAGTATGAGCGCCAGATCGACAGAGAAATGCTCGGTGGCACTACCGAAA
CTCGTATGAGACGCCTTCAACGGCTTATCCAAGGGTTGATCAGGATACTG
GGCGACTGTGTGTATACAGCGACCCTCAGAAGACATTTTCAAGGTCGATA
GCCCATCCAAACGTCGACTCTGTCGTTTGGTCACCTCCGGTGCCGGGATT
GAAGTGTAAAGAGAGACTTAAGGCACTGGTATGTGCCTTAAATGAAGTTT
GACATCCTGCTTGTATCTCGCTTTCATCGGATATGATTCATTTCTTATAT
ATCACTCCGCGAATACATAAGGGTTTTTCCGCACTGCCTTGCAAACACAC
AATTCAGCACCAGCACGCTTAGCCCCTACCTACGGCTTTCGCATGGACAA
AAATTGCTAAATCCCATACAATTAACCATGCTCCTAAAAGAGTCCATGTG
AGCCTTTATATTTGCTAGGTTCGACAGGAGAATGCAGGAATATCCGGGCT
GCCTTGTACGTCTCACATATGCTCCGTGAGTTGATGTGGTATACTAAAAT
GTGTGGCCCTTCGTGTAGCTGGAAATCCGCAGCTTATGGTGCATGGGGAT
ATAGCACATGAGTGGAACGAATTAAGCGAGTGAGGGGGCGAGGAATGTGA
GAGATACCGAACAGAAACATAAACACAATATTGAAAAGAAGAGATCATAG
AAATACTCTTGAAATTTATAGATCAATGAGCTCGCAGGTGTTGCTGCTAT
GCCCGAGATAAGTGAGCACGGGAGTGTAAGATGGGTCAATAGATATTTCC
GAGGATTCTTCCAGAGACATGACTACGACTATGATTAGTAGAACTTGAAA
ACAGGTAACGGATTGTGATCTACGGACTTGTCAGGCCACGACAGTCTTGT
CGCAATATTAG
back to top

Coding sequence (CDS) from alignment at KZ851917.1:415506..416666-

>M747DRAFT_352086-T1 ID=M747DRAFT_352086-T1|Name=M747DRAFT_352086-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2640bp|location=Sequence derived from alignment at KZ851917.1:415506..416666- (Aspergillus niger ATCC 13496)
GTAACGGATTGTGATCTACGGACTTGTCAGGCCACGACAGTCTTGTCGCA
ATATTAGATCAATGAGCTCGCAGGTGTTGCTGCTATGCCCGAGATAAGTG
AGCACGGGAGTGTTCGACAGGAGAATGCAGGAATATCCGGGCTGCCTTGT
ACGTCTCACATATGCTCCCCCATCCAAACGTCGACTCTGTCGTTTGGTCA
CCTCCGGTGCCGGGATTGAAGTGTAAAGAGAGACTTAAGGCACTGATGTA
TCACGAAGTACAAAGGCATGGAGGAACCGTTGCCTCCTTAAATGAATGGG
CCGAGGGCATTGATCCGAGAACATATCGGAAGATGATACCTTGGCACCAG
GATCTCATCAACGCATGTGGGAGATATAAAACATATCTTGATATAATAAA
CCCGACTCATGAAGCCTACTTTGAGTATGAGCGCCAGATCGACAGAGAAA
TGCTCGGTGGCACTACCGAAACTCGTATGAGACGCCTTCAACGGCTTATC
CAAGGGTTGATCAGGATACTGGGCGACTGTAACGGATTGTGATCTACGGA
CTTGTCAGGCCACGACAGTCTTGTCGCAATATTAGATCAATGAGCTCGCA
GGTGTTGCTGCTATGCCCGAGATAAGTGAGCACGGGAGTGTTCGACAGGA
GAATGCAGGAATATCCGGGCTGCCTTGTACGTCTCACATATGCTCCCCCA
TCCAAACGTCGACTCTGTCGTTTGGTCACCTCCGGTGCCGGGATTGAAGT
GTAAAGAGAGACTTAAGGCACTGATGTATCACGAAGTACAAAGGCATGGA
GGAACCGTTGCCTCCTTAAATGAATGGGCCGAGGGCATTGATCCGAGAAC
ATATCGGAAGATGATACCTTGGCACCAGGATCTCATCAACGCATGTGGGA
GATATAAAACATATCTTGATATAATAAACCCGACTCATGAAGCCTACTTT
GAGTATGAGCGCCAGATCGACAGAGAAATGCTCGGTGGCACTACCGAAAC
TCGTATGAGACGCCTTCAACGGCTTATCCAAGGGTTGATCAGGATACTGG
GCGACTGTAACGGATTGTGATCTACGGACTTGTCAGGCCACGACAGTCTT
GTCGCAATATTAGATCAATGAGCTCGCAGGTGTTGCTGCTATGCCCGAGA
TAAGTGAGCACGGGAGTGTTCGACAGGAGAATGCAGGAATATCCGGGCTG
CCTTGTACGTCTCACATATGCTCCCCCATCCAAACGTCGACTCTGTCGTT
TGGTCACCTCCGGTGCCGGGATTGAAGTGTAAAGAGAGACTTAAGGCACT
GATGTATCACGAAGTACAAAGGCATGGAGGAACCGTTGCCTCCTTAAATG
AATGGGCCGAGGGCATTGATCCGAGAACATATCGGAAGATGATACCTTGG
CACCAGGATCTCATCAACGCATGTGGGAGATATAAAACATATCTTGATAT
AATAAACCCGACTCATGAAGCCTACTTTGAGTATGAGCGCCAGATCGACA
GAGAAATGCTCGGTGGCACTACCGAAACTCGTATGAGACGCCTTCAACGG
CTTATCCAAGGGTTGATCAGGATACTGGGCGACTGTAACGGATTGTGATC
TACGGACTTGTCAGGCCACGACAGTCTTGTCGCAATATTAGATCAATGAG
CTCGCAGGTGTTGCTGCTATGCCCGAGATAAGTGAGCACGGGAGTGTTCG
ACAGGAGAATGCAGGAATATCCGGGCTGCCTTGTACGTCTCACATATGCT
CCCCCATCCAAACGTCGACTCTGTCGTTTGGTCACCTCCGGTGCCGGGAT
TGAAGTGTAAAGAGAGACTTAAGGCACTGATGTATCACGAAGTACAAAGG
CATGGAGGAACCGTTGCCTCCTTAAATGAATGGGCCGAGGGCATTGATCC
GAGAACATATCGGAAGATGATACCTTGGCACCAGGATCTCATCAACGCAT
GTGGGAGATATAAAACATATCTTGATATAATAAACCCGACTCATGAAGCC
TACTTTGAGTATGAGCGCCAGATCGACAGAGAAATGCTCGGTGGCACTAC
CGAAACTCGTATGAGACGCCTTCAACGGCTTATCCAAGGGTTGATCAGGA
TACTGGGCGACTGTAACGGATTGTGATCTACGGACTTGTCAGGCCACGAC
AGTCTTGTCGCAATATTAGATCAATGAGCTCGCAGGTGTTGCTGCTATGC
CCGAGATAAGTGAGCACGGGAGTGTTCGACAGGAGAATGCAGGAATATCC
GGGCTGCCTTGTACGTCTCACATATGCTCCCCCATCCAAACGTCGACTCT
GTCGTTTGGTCACCTCCGGTGCCGGGATTGAAGTGTAAAGAGAGACTTAA
GGCACTGATGTATCACGAAGTACAAAGGCATGGAGGAACCGTTGCCTCCT
TAAATGAATGGGCCGAGGGCATTGATCCGAGAACATATCGGAAGATGATA
CCTTGGCACCAGGATCTCATCAACGCATGTGGGAGATATAAAACATATCT
TGATATAATAAACCCGACTCATGAAGCCTACTTTGAGTATGAGCGCCAGA
TCGACAGAGAAATGCTCGGTGGCACTACCGAAACTCGTATGAGACGCCTT
CAACGGCTTATCCAAGGGTTGATCAGGATACTGGGCGACT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_352086M747DRAFT_352086Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_352086-T1M747DRAFT_352086-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_352086-T1.cdsM747DRAFT_352086-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_352086-T1.exon5M747DRAFT_352086-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_352086-T1.exon4M747DRAFT_352086-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_352086-T1.exon3M747DRAFT_352086-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_352086-T1.exon2M747DRAFT_352086-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_352086-T1.exon1M747DRAFT_352086-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_352086-T1.utr5p1M747DRAFT_352086-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:415506..416666 -
Powered by Drupal