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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851921.1:176217..177619- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_353836-T1 ID=M747DRAFT_353836-T1|Name=M747DRAFT_353836-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1403bp|location=Sequence derived from alignment at KZ851921.1:176217..177619- (Aspergillus niger ATCC 13496)
ATGAGATTAACACTACCGATAGTGTTCTCCTCGTTGGCGGTGGCATCAAC
CGCTCGCCATGGAGAATCATCCCGAGTCTTCAACCGTGACACATCTTCAT
TCATCCATCCAGGCCTCCTCCACACGGCCACAGATTTCTCACGCATCGCC
TCAAAAGTATCCAGCAACACCGAACCATGGCTAACAGGCTGGTACAAACT
CACCAACAGCTCCAACATCAACCTGGACTACACGCCATCCCCAAAGACAA
TCGTCTATCGCGGCGCAGACGGCACCCACACAGAGAACTATCCCTCCCTG
TACAAAGACATCGCAGCCGCCTACGCCATGGCCATCTACTGGAAAGTGAC
CGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAATGGA
GCTCCACCCTAACCGAAATCTCCGGCACAACTGACATGTACCTCGCCGCA
GGCATCTACGGGTACGAATTCGCCAATGTTGCCGAGATCATGCGCACGTA
TTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATGGTCG
ATGTGTTCTATCCCCTTAATCATGATTTCTTGCAGAATCATCATGGCGCG
GCTGTTGATCATTACTGGGCGAATTGGGATTTGTGTAATATCGCCTCGGT
TCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAGGGGT
TGACTTATTTCAAGTCCGGAGCTGGGAATGGCCAGATTGAAAAGGCGATC
TGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGTCAGGGCCAGGAGGC
CGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGCCCTA
TCGCCCAGACGGCATACAATCAGGGAACGGACCTGTTTGAATATCTGGAT
AATCGCATTCTGGCTGGGTGAGTTACCTCCCATTCTTATACTTGATCATT
ACATTTTCCCTATACCCTTATCCCCAAACCTCTCAACATGGAACATACCG
AAAATATAGAGAACTAACCAATCGCAAGAGCGGAATACGTCGCCAAATAC
AACCTCGGCAATGACGTTCCCTACACGACCTACAACAACAGCGACGACGT
CAACCAGACGGTTATCAGCAATTCCAGCCGCGGAGACATCAGACCCATCT
GGGAGCTACTGTATAACCACTATGGTGTACTCAAGGGACTGGATGTCACT
TACACAAAGGAGTATCGCGATATGGTCGTTGAGGATGGCGATGGGGCTGA
GGGCGGTGGTGGCGATTATGGAACTACTAGTGGTGGGTATGACCAGTTGG
GATGGGGGACGCTGATGTATACTCTTGAGTGAGATGGAGCTGAGGAGCAA
GGGTCGAGGGGTCCATTGTATAAGTATGGGATTTTCCAAGTAAGCATTGT
GCA back to topCoding sequence (CDS) from alignment at KZ851921.1:176217..177619- >M747DRAFT_353836-T1 ID=M747DRAFT_353836-T1|Name=M747DRAFT_353836-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2442bp|location=Sequence derived from alignment at KZ851921.1:176217..177619- (Aspergillus niger ATCC 13496)
AGCGGAATACGTCGCCAAATACAACCTCGGCAATGACGTTCCCTACACGA
CCTACAACAACAGCGACGACGTCAACCAGACGGTTATCAGCAATTCCAGC
CGCGGAGACATCAGACCCATCTGGGAGCTACTGTATAACCACTATGGTGT
ACTCAAGGGACTGGATGTCACTTACACAAAGGAGTATCGCGATATGGTCG
TTGAGGATGGCGATGGGGCTGAGGGCGGTGGTGGCGATTATGGAACTACT
AGTGGTGGGTATGACCAGTTGGGATGGGGGACGCTGATGTATACTCTTGA
GTGAATGAGATTAACACTACCGATAGTGTTCTCCTCGTTGGCGGTGGCAT
CAACCGCTCGCCATGGAGAATCATCCCGAGTCTTCAACCGTGACACATCT
TCATTCATCCATCCAGGCCTCCTCCACACGGCCACAGATTTCTCACGCAT
CGCCTCAAAAGTATCCAGCAACACCGAACCATGGCTAACAGGCTGGTACA
AACTCACCAACAGCTCCAACATCAACCTGGACTACACGCCATCCCCAAAG
ACAATCGTCTATCGCGGCGCAGACGGCACCCACACAGAGAACTATCCCTC
CCTGTACAAAGACATCGCAGCCGCCTACGCCATGGCCATCTACTGGAAAG
TGACCGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAA
TGGAGCTCCACCCTAACCGAAATCTCCGGCACAACTGACATGTACCTCGC
CGCAGGCATCTACGGGTACGAATTCGCCAATGTTGCCGAGATCATGCGCA
CGTATTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATG
GTCGATGTGTTCTATCCCCTTAATCATGATTTCTTGCAGAATCATCATGG
CGCGGCTGTTGATCATTACTGGGCGAATTGGGATTTGTGTAATATCGCCT
CGGTTCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAG
GGGTTGACTTATTTCAAGTCCGGAGCTGGGAATGGCCAGATTGAAAAGGC
GATCTGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGTCAGGGCCAGG
AGGCCGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGC
CCTATCGCCCAGACGGCATACAATCAGGGAACGGACCTGTTTGAATATCT
GGATAATCGCATTCTGGCTGGAGCGGAATACGTCGCCAAATACAACCTCG
GCAATGACGTTCCCTACACGACCTACAACAACAGCGACGACGTCAACCAG
ACGGTTATCAGCAATTCCAGCCGCGGAGACATCAGACCCATCTGGGAGCT
ACTGTATAACCACTATGGTGTACTCAAGGGACTGGATGTCACTTACACAA
AGGAGTATCGCGATATGGTCGTTGAGGATGGCGATGGGGCTGAGGGCGGT
GGTGGCGATTATGGAACTACTAGTGGTGGGTATGACCAGTTGGGATGGGG
GACGCTGATGTATACTCTTGAGTGAATGAGATTAACACTACCGATAGTGT
TCTCCTCGTTGGCGGTGGCATCAACCGCTCGCCATGGAGAATCATCCCGA
GTCTTCAACCGTGACACATCTTCATTCATCCATCCAGGCCTCCTCCACAC
GGCCACAGATTTCTCACGCATCGCCTCAAAAGTATCCAGCAACACCGAAC
CATGGCTAACAGGCTGGTACAAACTCACCAACAGCTCCAACATCAACCTG
GACTACACGCCATCCCCAAAGACAATCGTCTATCGCGGCGCAGACGGCAC
CCACACAGAGAACTATCCCTCCCTGTACAAAGACATCGCAGCCGCCTACG
CCATGGCCATCTACTGGAAAGTGACCGGCAACACGAGCTACGCCGACGTG
GTCGTGAACATCCTCGATGAATGGAGCTCCACCCTAACCGAAATCTCCGG
CACAACTGACATGTACCTCGCCGCAGGCATCTACGGGTACGAATTCGCCA
ATGTTGCCGAGATCATGCGCACGTATTCCGCATGGCCCAGTGCGAATCTG
ACCCGCTTTGCGGATATGATGGTCGATGTGTTCTATCCCCTTAATCATGA
TTTCTTGCAGAATCATCATGGCGCGGCTGTTGATCATTACTGGGCGAATT
GGGATTTGTGTAATATCGCCTCGGTTCTGTCCATTGGGGTGTTGACCGAT
AACGAAACCATGTTCGATGAGGGGTTGACTTATTTCAAGTCCGGAGCTGG
GAATGGCCAGATTGAAAAGGCGATCTGGAAGCTGTATCAGGTTGATGGGG
AGTCCTTGGGTCAGGGCCAGGAGGCCGGGCGGGATCAGGGCCACTCGATG
TTGGATTTCGCCCTGCTTGGCCCTATCGCCCAGACGGCATACAATCAGGG
AACGGACCTGTTTGAATATCTGGATAATCGCATTCTGGCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042597 | periplasmic space |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-23) |
| DBxref | InterPro:IPR008929 |
| DBxref | InterPro:IPR008397 |
| DBxref | PFAM:PF05426 |
| Product | chondroitin AC/alginate lyase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851921.1 | supercontig | KZ851921.1:176217..177619 - |
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