You are here

Home

M747DRAFT_353959-T1, M747DRAFT_353959-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_353959-T1
Unique NameM747DRAFT_353959-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:380753..381890-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_353959-T1 ID=M747DRAFT_353959-T1|Name=M747DRAFT_353959-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1138bp|location=Sequence derived from alignment at KZ851921.1:380753..381890- (Aspergillus niger ATCC 13496)
CCTATCTCTACTGCAGCAATGGCTCCTCGTACCCTCCAGGTCGCCTGTGC
CGGCCTTGGCCGCATGGGCAAGCGTCACGCCCTGAACCTCCTGCACCGAT
CCCCGCGGTCATCTCTGGTGGCAGCTTTCACCCCAGATCCTGTTGAGGCC
AAATGGGCTGAGGACAACCTGGTTCCCTACGGAGTGACCATCTACTCGGA
CTACGATGCTATGCTAGGCCACAGCGGCCTTGAAGCGGTGCTCGTATCAA
CCATTACCACCGTGCATGCAGAACAAGCTATCAAAGCCATTGAAGCAGGA
AAGCATGTCTTGTGCGAGAAGCCTCTCTCAACTGATGCTGCTATCGTATG
TTCAACTCTCTGATCCGTAAGCGTCGTCACATCTACGCCCATGACTAAAG
GAACGTACATAGTGCCAATCTGTCGTGGACGCAGCAACCCTCCACCCCGA
ACTCAAAGTAATGTGCGGATTCTCCCGCCGCTTCGACGTTTCCTATCGAG
ATGCCTACTCAAAGATGAGCTCCGGACTTATCGGCACGCCCGCCATCATT
CGCAGCCAAACATGCGACAAGATCGATCCCACCGGTGCCTTCGTGAACTT
CGCCGCCACCTCAGGCGGGATCTTCTGCGACTGCTCCGTCCACGACATCG
ACCTGATCCTGTGGTTCTTCGGGGCTGACAGCAAAGTGAAGAGCGTGGTA
GCGAGTGGGACCGTGGCCCTGCATCCCGAGCTCAAAGCTTACGGGGATGC
GGATAACGCGGTGGGGATTATAGAGTTTCATGGGGGCCGGGTGGCGTATC
TGTATTGTTCGCGGATGATGGCGGCGGGGCAAGAAGATACGACGGAGATT
ATTGGGACTGAGGGGAAGCTAGTAGTGAATGGTCATGCGCAGAAGAACCT
GGTGGGAATCTTTGATCGAAATGGGGCCAGACGCGAGCTGCCGGCGCATT
ACTATGAGCGGTTTGAGATGGCGTTTGTGGATGAGGTGAATGAGTTTACG
GCGGCTTGTTTGGATGATACAGAGCTGCCTATGGGGATTCAGGGTGCGGT
GGAGGCAGTCAGGATCGCGAAGGCGTTGCAGGACTCGTTGGGGAGTGGGG
AAAAGGTAAGGTTCGATGAGCGGGGGATTCGGCTGTGA
back to top

Coding sequence (CDS) from alignment at KZ851921.1:380753..381890-

>M747DRAFT_353959-T1 ID=M747DRAFT_353959-T1|Name=M747DRAFT_353959-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2106bp|location=Sequence derived from alignment at KZ851921.1:380753..381890- (Aspergillus niger ATCC 13496)
TGCCAATCTGTCGTGGACGCAGCAACCCTCCACCCCGAACTCAAAGTAAT
GTGCGGATTCTCCCGCCGCTTCGACGTTTCCTATCGAGATGCCTACTCAA
AGATGAGCTCCGGACTTATCGGCACGCCCGCCATCATTCGCAGCCAAACA
TGCGACAAGATCGATCCCACCGGTGCCTTCGTGAACTTCGCCGCCACCTC
AGGCGGGATCTTCTGCGACTGCTCCGTCCACGACATCGACCTGATCCTGT
GGTTCTTCGGGGCTGACAGCAAAGTGAAGAGCGTGGTAGCGAGTGGGACC
GTGGCCCTGCATCCCGAGCTCAAAGCTTACGGGGATGCGGATAACGCGGT
GGGGATTATAGAGTTTCATGGGGGCCGGGTGGCGTATCTGTATTGTTCGC
GGATGATGGCGGCGGGGCAAGAAGATACGACGGAGATTATTGGGACTGAG
GGGAAGCTAGTAGTGAATGGTCATGCGCAGAAGAACCTGGTGGGAATCTT
TGATCGAAATGGGGCCAGACGCGAGCTGCCGGCGCATTACTATGAGCGGT
TTGAGATGGCGTTTGTGGATGAGGTGAATGAGTTTACGGCGGCTTGTTTG
GATGATACAGAGCTGCCTATGGGGATTCAGGGTGCGGTGGAGGCAGTCAG
GATCGCGAAGGCGTTGCAGGACTCGTTGGGGAGTGGGGAAAAGGTAAGGT
TCGATGAGCGGGGGATTCGGCTGTGAATGGCTCCTCGTACCCTCCAGGTC
GCCTGTGCCGGCCTTGGCCGCATGGGCAAGCGTCACGCCCTGAACCTCCT
GCACCGATCCCCGCGGTCATCTCTGGTGGCAGCTTTCACCCCAGATCCTG
TTGAGGCCAAATGGGCTGAGGACAACCTGGTTCCCTACGGAGTGACCATC
TACTCGGACTACGATGCTATGCTAGGCCACAGCGGCCTTGAAGCGGTGCT
CGTATCAACCATTACCACCGTGCATGCAGAACAAGCTATCAAAGCCATTG
AAGCAGGAAAGCATGTCTTGTGCGAGAAGCCTCTCTCAACTGATGCTGCT
ATCTGCCAATCTGTCGTGGACGCAGCAACCCTCCACCCCGAACTCAAAGT
AATGTGCGGATTCTCCCGCCGCTTCGACGTTTCCTATCGAGATGCCTACT
CAAAGATGAGCTCCGGACTTATCGGCACGCCCGCCATCATTCGCAGCCAA
ACATGCGACAAGATCGATCCCACCGGTGCCTTCGTGAACTTCGCCGCCAC
CTCAGGCGGGATCTTCTGCGACTGCTCCGTCCACGACATCGACCTGATCC
TGTGGTTCTTCGGGGCTGACAGCAAAGTGAAGAGCGTGGTAGCGAGTGGG
ACCGTGGCCCTGCATCCCGAGCTCAAAGCTTACGGGGATGCGGATAACGC
GGTGGGGATTATAGAGTTTCATGGGGGCCGGGTGGCGTATCTGTATTGTT
CGCGGATGATGGCGGCGGGGCAAGAAGATACGACGGAGATTATTGGGACT
GAGGGGAAGCTAGTAGTGAATGGTCATGCGCAGAAGAACCTGGTGGGAAT
CTTTGATCGAAATGGGGCCAGACGCGAGCTGCCGGCGCATTACTATGAGC
GGTTTGAGATGGCGTTTGTGGATGAGGTGAATGAGTTTACGGCGGCTTGT
TTGGATGATACAGAGCTGCCTATGGGGATTCAGGGTGCGGTGGAGGCAGT
CAGGATCGCGAAGGCGTTGCAGGACTCGTTGGGGAGTGGGGAAAAGGTAA
GGTTCGATGAGCGGGGGATTCGGCTGTGAATGGCTCCTCGTACCCTCCAG
GTCGCCTGTGCCGGCCTTGGCCGCATGGGCAAGCGTCACGCCCTGAACCT
CCTGCACCGATCCCCGCGGTCATCTCTGGTGGCAGCTTTCACCCCAGATC
CTGTTGAGGCCAAATGGGCTGAGGACAACCTGGTTCCCTACGGAGTGACC
ATCTACTCGGACTACGATGCTATGCTAGGCCACAGCGGCCTTGAAGCGGT
GCTCGTATCAACCATTACCACCGTGCATGCAGAACAAGCTATCAAAGCCA
TTGAAGCAGGAAAGCATGTCTTGTGCGAGAAGCCTCTCTCAACTGATGCT
GCTATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_353959M747DRAFT_353959Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_353959-T1M747DRAFT_353959-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_353959-T1.cdsM747DRAFT_353959-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_353959-T1.exon2M747DRAFT_353959-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_353959-T1.exon1M747DRAFT_353959-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_353959-T1.utr5p1M747DRAFT_353959-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519211.3
NoteSMCOG1079:oxidoreductase
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR000683
DBxrefInterPro:IPR004104
DBxrefPFAM:PF01408
ProductNAD-binding Rossmann fold oxidoreductase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:380753..381890 -
Powered by Drupal