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M747DRAFT_355718-T1, M747DRAFT_355718-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_355718-T1
Unique NameM747DRAFT_355718-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:780189..781701-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_355718-T1 ID=M747DRAFT_355718-T1|Name=M747DRAFT_355718-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1513bp|location=Sequence derived from alignment at KZ851901.1:780189..781701- (Aspergillus niger ATCC 13496)
TCATCATCGCCCGTCAGATCATTACATTATCAGTAACCACCAAGGTACAA
TATCTTCTGCATCTACATCTACAGCTTCCACACGCTTCAACCAGCCATTG
GCACCCACCTGCATACCTCGCTCGCCATGCTCCCACCCCCCGATGACCCC
GACTCTACCACCGACACAACAATCACGTCCACCAGATCACCCCTCCCCCT
CACCACCGACAATGCCACCACCACCACGAAGAACCAGAACAACCACCACC
ACCCCCGCAAACCAAAACCCACGCTCCTCAACCCCCTTCAAAAAGGTATC
ACAACCTACCTAACCCACCACCACACCGATGCGACCCTCCCCCCCTCCTC
CCTTCCCAAACGCTTCACCATCTACGCCCCCCTCCTCCTCCTTCCCGTCA
ACGCCCTCACGACCCCACCCGCCTGGCACACCCTCTATGCCTCCCTAACC
GCATCTCAAAGGACCACTCTCTACGAATGCATTCTCTCCGCCTTCTCGCG
CTACAACCTCACCCACATCGCCATCAACGCCCCCATCGCATTAACCGACG
CGCAAGGCACCGAGAACCGCATGCGCAGTCCCGGCGGCTTACACCCACTA
CACGGGGATTTTGGGCCCTCGCCCAGCACAATCGTGAATCTGGATGCGCC
AACAGCGGAGGACCTGGGGCGTGCGTTGTGGGTGAGTACGGTGCAGAACC
ATGGCATTGAGCAGTTTTGGGCACCTATGTATACGATGTTCTCGAGGGGG
AATGTTACGGAGAAGGCAAGGATATTGGATGGCATGGAGGGGTTGCGGAG
GGAGGATATGGAGGGGGCAGGGATGAGTGTGGTGGATATGTATGCGGGGA
TTGGGTATTTTGTGTTTTCGTACCTGAGGCGGGGGGTGCAAAGGGTTTGG
GGGTGGGAGATTAATGGCTGGTCCGTGGAGGGGTTGCGGAGGGGGTGTAT
GGCTAATGGGTGGGGGTGTAGGGTTGTTAAGATTGATGGTGATGGGGTGT
TAGAGGGTGGTATGGGGGTGAAGGAGTTGGTGGATGGGTTGAGGGATGAG
GATAGGGTGGTGGTGTTTCATGGGGATAATCGGTTTGCGGCGCGTGTTTT
GGCACAGATCAGGCATGTGATGGAGGCGCGCGGGCGGTGGGCGCCTGTCA
GGCATGTTAATTTGGGCTTGTTGCCCTCGTCGGCGGCTGCTTGGGGGGCT
GCGTGTCGGATGGTGGATGGACGGTTGGGGGGTTGGCTGCATGTGCATGA
GAATGTGGATGTGCGGCGCATTGAGGAGATGGGGGATCATATCACGAAGG
AGATTGGGAGGTTAAGGGCCACGGCTTTGGAGGTTGAAGATGTGGTGGCG
GAGTGTCGGCATGTTGAACAGGTCAAGACTTACGCTCCGGGGGTGATGCA
TTGCGTGTTTGATGTCAAGATGCCGGCACTGGAGCTATAACGCTCATTGA
CGCTTCGTATGGATTGGGTTGGATTTCCAAGGGGTATGTATAATCACCCG
CCAGGATGCTCGT
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Coding sequence (CDS) from alignment at KZ851901.1:780189..781701-

>M747DRAFT_355718-T1 ID=M747DRAFT_355718-T1|Name=M747DRAFT_355718-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1314bp|location=Sequence derived from alignment at KZ851901.1:780189..781701- (Aspergillus niger ATCC 13496)
ATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGACACAACAATCAC
GTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGCCACCACCACCA
CGAAGAACCAGAACAACCACCACCACCCCCGCAAACCAAAACCCACGCTC
CTCAACCCCCTTCAAAAAGGTATCACAACCTACCTAACCCACCACCACAC
CGATGCGACCCTCCCCCCCTCCTCCCTTCCCAAACGCTTCACCATCTACG
CCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGACCCCACCCGCCTGG
CACACCCTCTATGCCTCCCTAACCGCATCTCAAAGGACCACTCTCTACGA
ATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCACCCACATCGCCATCA
ACGCCCCCATCGCATTAACCGACGCGCAAGGCACCGAGAACCGCATGCGC
AGTCCCGGCGGCTTACACCCACTACACGGGGATTTTGGGCCCTCGCCCAG
CACAATCGTGAATCTGGATGCGCCAACAGCGGAGGACCTGGGGCGTGCGT
TGTGGGTGAGTACGGTGCAGAACCATGGCATTGAGCAGTTTTGGGCACCT
ATGTATACGATGTTCTCGAGGGGGAATGTTACGGAGAAGGCAAGGATATT
GGATGGCATGGAGGGGTTGCGGAGGGAGGATATGGAGGGGGCAGGGATGA
GTGTGGTGGATATGTATGCGGGGATTGGGTATTTTGTGTTTTCGTACCTG
AGGCGGGGGGTGCAAAGGGTTTGGGGGTGGGAGATTAATGGCTGGTCCGT
GGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTGGGGGTGTAGGGTTG
TTAAGATTGATGGTGATGGGGTGTTAGAGGGTGGTATGGGGGTGAAGGAG
TTGGTGGATGGGTTGAGGGATGAGGATAGGGTGGTGGTGTTTCATGGGGA
TAATCGGTTTGCGGCGCGTGTTTTGGCACAGATCAGGCATGTGATGGAGG
CGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATTTGGGCTTGTTGCCC
TCGTCGGCGGCTGCTTGGGGGGCTGCGTGTCGGATGGTGGATGGACGGTT
GGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGTGCGGCGCATTGAGG
AGATGGGGGATCATATCACGAAGGAGATTGGGAGGTTAAGGGCCACGGCT
TTGGAGGTTGAAGATGTGGTGGCGGAGTGTCGGCATGTTGAACAGGTCAA
GACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGATGTCAAGATGCCGG
CACTGGAGCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0031591wybutosine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_355718M747DRAFT_355718Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_355718-T1.cdsM747DRAFT_355718-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_355718-T1.utr3p1M747DRAFT_355718-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_355718-T1.exon1M747DRAFT_355718-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_355718-T1.utr5p1M747DRAFT_355718-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_355718-T1M747DRAFT_355718-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR026274
DBxrefInterPro:IPR030382
ProducttRNA wybutosine-synthesizing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:780189..781701 -
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