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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851902.1:277880..280075- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_357941-T1 ID=M747DRAFT_357941-T1|Name=M747DRAFT_357941-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2196bp|location=Sequence derived from alignment at KZ851902.1:277880..280075- (Aspergillus niger ATCC 13496)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCATTTGAGGTCCAGATGCGCCGGC
GGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATCC
GGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGCT
AAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCATG
AAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCTG
TCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTAC
AATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTGG
AAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCCC
TTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCCG
GTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACAC
AGCAGAGACACTTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAAT
GTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAGC
GTTATTCGTGTGGGATTCCCTCCTTTGTATTCTGAGGAGCATTGCGAAGG
TTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTCA
GAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGTA
TGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCTC
GTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACAC
AAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATCA
AGCTACAGATGGGGCTTTCTATTTCGATGAGCTTTTCGACGATATGAGCA
GGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGAT
TGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGAG back to topCoding sequence (CDS) from alignment at KZ851902.1:277880..280075- >M747DRAFT_357941-T1 ID=M747DRAFT_357941-T1|Name=M747DRAFT_357941-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6273bp|location=Sequence derived from alignment at KZ851902.1:277880..280075- (Aspergillus niger ATCC 13496)
ATGTTCCCCGGCATGAACGAGCCGCCTCATGAAAAACGAGGCGCATCAGA
GATGATATTTTGCTTGGCTCGGATGGAGCTGTCAAATTTCTACACTCGAA
CCGGGGTCCAGCTGAAGGGGAACGGGGGTACAATCGAGTTCCGGACCCCC
GAGGAGATCGAGCGACTGATTGACGAGGTGGAAGACCTCATCGAGAAGAA
GTTCTTGCGGTACTGCGACATCTTGAACCCCTTACACTTTCTGACCACCG
GCGTTATGCGATCCGCCATTAGTGCTGTCCGGTTACGCGCGCGGATGCCG
CTGCTCAAGCAAGAAACTATAACCGACACACAGCAGAGACACTTCTGCAC
CCTTGCCGAAAAGGTCCTCGACACCAGAAATGTCATGTATAGTAATCCCG
CGACTCAAAAGTTCCGCTGGCAGATGCAAGCGTTATTCGTGTGGGATTCC
CTCCTTTGTATTCTGAGGAGCATTGCGAAGGTTGGATTTTATTCGCCATC
AGAGCTTGATGCTGCCTGGAAAAGGGTTTCAGAGGTCTACGCGAATCACG
AAGCACTGCGTCAGGGCCGAAGGACCTTGTATGCTACGATTGCTAAGATC
ACTTTGAAGGCCTGGTTACTAAACCCGCCTCGTAATTCAACTCCCGAACC
GGATTTTATGACCGCGCTGCGCGCTCAACACAAGCCCAAAGAGATCGACC
AGCGGCATGACAGTACGTTTGCTGCCCATCAAGCTACAGATGGGGCTTTC
TATTTCGATGAGCTTTTCGACGATATGAGCAGGGCTGATCCCAATATGAA
CAATGCCTTCAATCTCGACCCTTCTGCCGATTGGCTATTCTGGGACCAAA
TGTGTGGAGAAACCAGCCTTGGTTGACCACCCCCTCGGTTATCAGCGGAA
GAGACTTGGAGGCCTCAGCAAATAGTATACAGGGACAGACTCCAGGGACA
GCGAACTCGCAGGCTGACGTTGCAGCCAATAAACTGCTTCCCAAGTATGG
CAATTCTCGCCACATTGACGATGTTCTGCTCCTCGACGCTGGCGAAGGTG
ACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAGCAACAGAACCATCATGAA
GATGAGCCTGGTCCCGACAAAGCCACTCCAACCGGTCTTCTTGGTGCCCT
TGCCGCGCATTCCATCTCGGATGCAAGTACGAGAAGCGCGATAAGCCTCA
CCGACCTTCACCCTAGCTGTGAGCATGCGGCTAAGCTCTGGTATGCCTAC
GTGGAGAACGTCGAGCCTCTTTGCAAGGTTCTTCATGTTCCGACTGTCGC
CAGGATAGTCCACACCGTCTCCAAGCACCCAGCGACTGCCTCCAAGAACG
ATGAATGCATACTGTTTGCCATTTACCATTTCGCCGTATTTTCAATGTCC
GATGACGAGTGTTCACATGAACTCCATGATTCCAGGGCCCAGCTGATGCA
CAAATATCGGACCGCAGTCACTCAGGCATTGGTAAATGCCTCTTGGCTCA
AGACAACCTCGTTGCCGGTTTTACAGGCTTACACTCTCTTCCTTATCTCC
TTGCGCACTCAAATCGATTCTCATACATTCTGGATTTTGACTGGGATTGC
AATTCGCCTGGCCCAGCGCATAGGATTGCATCGGGACGGCGAAAGCGTCG
GATTGCCCCATTTGAGGTCCAGATGCGCCGGCGGCTCTTTTGGCAGCTGC
TACCCTTGGACAGCTACGCAGGTCAAACATCCGGCACGGATGCCACCCAA
ACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACAAGAGAGCGGAT
ACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTGTCCCACTTGCC
TCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAATGGCTCCTGTGA
AACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGCCTGTGTGCGCA
AGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCAACTGCATCAAG
ACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGACGCAAGAGGAA
ACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGCACATGTTCCCC
GGCATGAACGAGCCGCCTCATGAAAAACGAGGCGCATCAGAGATGATATT
TTGCTTGGCTCGGATGGAGCTGTCAAATTTCTACACTCGAACCGGGGTCC
AGCTGAAGGGGAACGGGGGTACAATCGAGTTCCGGACCCCCGAGGAGATC
GAGCGACTGATTGACGAGGTGGAAGACCTCATCGAGAAGAAGTTCTTGCG
GTACTGCGACATCTTGAACCCCTTACACTTTCTGACCACCGGCGTTATGC
GATCCGCCATTAGTGCTGTCCGGTTACGCGCGCGGATGCCGCTGCTCAAG
CAAGAAACTATAACCGACACACAGCAGAGACACTTCTGCACCCTTGCCGA
AAAGGTCCTCGACACCAGAAATGTCATGTATAGTAATCCCGCGACTCAAA
AGTTCCGCTGGCAGATGCAAGCGTTATTCGTGTGGGATTCCCTCCTTTGT
ATTCTGAGGAGCATTGCGAAGGTTGGATTTTATTCGCCATCAGAGCTTGA
TGCTGCCTGGAAAAGGGTTTCAGAGGTCTACGCGAATCACGAAGCACTGC
GTCAGGGCCGAAGGACCTTGTATGCTACGATTGCTAAGATCACTTTGAAG
GCCTGGTTACTAAACCCGCCTCGTAATTCAACTCCCGAACCGGATTTTAT
GACCGCGCTGCGCGCTCAACACAAGCCCAAAGAGATCGACCAGCGGCATG
ACAGTACGTTTGCTGCCCATCAAGCTACAGATGGGGCTTTCTATTTCGAT
GAGCTTTTCGACGATATGAGCAGGGCTGATCCCAATATGAACAATGCCTT
CAATCTCGACCCTTCTGCCGATTGGCTATTCTGGGACCAAATGTGTGGAG
AAACCAGCCTTGGTTGACCACCCCCTCGGTTATCAGCGGAAGAGACTTGG
AGGCCTCAGCAAATAGTATACAGGGACAGACTCCAGGGACAGCGAACTCG
CAGGCTGACGTTGCAGCCAATAAACTGCTTCCCAAGTATGGCAATTCTCG
CCACATTGACGATGTTCTGCTCCTCGACGCTGGCGAAGGTGACCTGGGTG
AGTTGTCCGTGTCCGAGTCCGAGCAACAGAACCATCATGAAGATGAGCCT
GGTCCCGACAAAGCCACTCCAACCGGTCTTCTTGGTGCCCTTGCCGCGCA
TTCCATCTCGGATGCAAGTACGAGAAGCGCGATAAGCCTCACCGACCTTC
ACCCTAGCTGTGAGCATGCGGCTAAGCTCTGGTATGCCTACGTGGAGAAC
GTCGAGCCTCTTTGCAAGGTTCTTCATGTTCCGACTGTCGCCAGGATAGT
CCACACCGTCTCCAAGCACCCAGCGACTGCCTCCAAGAACGATGAATGCA
TACTGTTTGCCATTTACCATTTCGCCGTATTTTCAATGTCCGATGACGAG
TGTTCACATGAACTCCATGATTCCAGGGCCCAGCTGATGCACAAATATCG
GACCGCAGTCACTCAGGCATTGGTAAATGCCTCTTGGCTCAAGACAACCT
CGTTGCCGGTTTTACAGGCTTACACTCTCTTCCTTATCTCCTTGCGCACT
CAAATCGATTCTCATACATTCTGGATTTTGACTGGGATTGCAATTCGCCT
GGCCCAGCGCATAGGATTGCATCGGGACGGCGAAAGCGTCGGATTGCCCC
ATTTGAGGTCCAGATGCGCCGGCGGCTCTTTTGGCAGCTGCTACCCTTGG
ACAGCTACGCAGGTCAAACATCCGGCACGGATGCCACCCAAACGCCGACT
ACGAAAGAATACGGCCGCGATAGCCATACAAGAGAGCGGATACATCGGTT
CCCCATCAATGGAGGATACAAGGAATCTTGTCCCACTTGCCTCCGCCCCG
GCAAAGCATCTCCCTCTTGACGCCCACAATGGCTCCTGTGAAACCGGCTC
GTTGACCCCAGTCCGCTTCAACTGTCAAGCCTGTGTGCGCAAGAAGATCA
AATGCAACCGCGCGGTGCCCAAGTGTGCCAACTGCATCAAGACCAAGCTC
GAGTGTGTCTACCAGCCACCGCCGCCACGACGCAAGAGGAAACGTAGCCA
GGGCGAGGAAGATGTACATGAACGTCTGGCACATGTTCCCCGGCATGAAC
GAGCCGCCTCATGAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGC
TCGGATGGAGCTGTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGG
GGAACGGGGGTACAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTG
ATTGACGAGGTGGAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGA
CATCTTGAACCCCTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCA
TTAGTGCTGTCCGGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACT
ATAACCGACACACAGCAGAGACACTTCTGCACCCTTGCCGAAAAGGTCCT
CGACACCAGAAATGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCT
GGCAGATGCAAGCGTTATTCGTGTGGGATTCCCTCCTTTGTATTCTGAGG
AGCATTGCGAAGGTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTG
GAAAAGGGTTTCAGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCC
GAAGGACCTTGTATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTA
CTAAACCCGCCTCGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCT
GCGCGCTCAACACAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGT
TTGCTGCCCATCAAGCTACAGATGGGGCTTTCTATTTCGATGAGCTTTTC
GACGATATGAGCAGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGA
CCCTTCTGCCGATTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCC
TTGGTTGACCACCCCCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAG
CAAATAGTATACAGGGACAGACTCCAGGGACAGCGAACTCGCAGGCTGAC
GTTGCAGCCAATAAACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGA
CGATGTTCTGCTCCTCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCG
TGTCCGAGTCCGAGCAACAGAACCATCATGAAGATGAGCCTGGTCCCGAC
AAAGCCACTCCAACCGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTC
GGATGCAAGTACGAGAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCT
GTGAGCATGCGGCTAAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCT
CTTTGCAAGGTTCTTCATGTTCCGACTGTCGCCAGGATAGTCCACACCGT
CTCCAAGCACCCAGCGACTGCCTCCAAGAACGATGAATGCATACTGTTTG
CCATTTACCATTTCGCCGTATTTTCAATGTCCGATGACGAGTGTTCACAT
GAACTCCATGATTCCAGGGCCCAGCTGATGCACAAATATCGGACCGCAGT
CACTCAGGCATTGGTAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGG
TTTTACAGGCTTACACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGAT
TCTCATACATTCTGGATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCG
CATAGGATTGCATCGGGACGGCGAAAGCGTCGGATTGCCCCATTTGAGGT
CCAGATGCGCCGGCGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACG
CAGGTCAAACATCCGGCACGGATGCCACCCAAACGCCGACTACGAAAGAA
TACGGCCGCGATAGCCATACAAGAGAGCGGATACATCGGTTCCCCATCAA
TGGAGGATACAAGGAATCTTGTCCCACTTGCCTCCGCCCCGGCAAAGCAT
CTCCCTCTTGACGCCCACAATGGCTCCTGTGAAACCGGCTCGTTGACCCC
AGTCCGCTTCAACTGTCAAGCCTGTGTGCGCAAGAAGATCAAATGCAACC
GCGCGGTGCCCAAGTGTGCCAACTGCATCAAGACCAAGCTCGAGTGTGTC
TACCAGCCACCGCCGCCACGACGCAAGAGGAAACGTAGCCAGGGCGAGGA
AGATGTACATGAACGTCTGGCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | Transcription factor vrtR1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851902.1 | supercontig | KZ851902.1:277880..280075 - |
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