You are here

Home

M747DRAFT_358369-T1, M747DRAFT_358369-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_358369-T1
Unique NameM747DRAFT_358369-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:1059788..1061387-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_358369-T1 ID=M747DRAFT_358369-T1|Name=M747DRAFT_358369-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1600bp|location=Sequence derived from alignment at KZ851902.1:1059788..1061387- (Aspergillus niger ATCC 13496)
ATGAACGGCAATCCATCCTCTTCATCAGCTACAGAGACAAACGCCGCCGA
TCTAGAAAAAGAGCCGAACCAAGATGCACCACCTAGGCTGGAGGTATTTT
CAGTCTTCACAGTCAACCAGAAGAGAGCCATGGTGGCGACCGGCTCAATG
GCGAGCTTTTTCTCGCCTTTGTCTTCAAGCATCTACTTCCCTGCCATGGA
CACGATCGCAACAGCGCTGAATGTCTCCACATCCAAGATTGATTTGACTG
TCACGACCTACCTCGTGAGTCTAGAGTCCCTTTTACAGGTTCAGTAACTG
ATGATGTACTTTTTATTCCCAGATAATGCAAGGCATAGCTCCCATGTTGA
TCGCCGGATTCTCAGACACAGCCGGCAGACGTCCCGCCTACATAATCTGC
TTCACCGTCTATATCGCCGCCAACCTGGGCCTCGGCATCCAGAACGACTA
CGGTTCGCTACTCGGTCTGCGATGCCTCCAAAGTGCAGGAAGCAGCGGCA
CCGTGGCCCTGGCCAACGGCCTCGTTGGAGACCTAGTAACATCAGCGGAA
CGCGGTACATACATCGCCTTCGCTTCGCTTGGGAGCATGCTCGGCCCCTC
TCTGTCGCCCATCATCGGCGGACTCCTCAGCCAATATCTCAACTGGCACT
GGATATTTTGGTTCCTTCTCATCTTCTCGGGTGCCTTCTTCCTCCCTCTA
TTACTCTTCCTCCCGGAGACCTGCCGCAAAGTCGTAGCCGATGGCTCTGT
CCCACCCCCCACACTAAACAAAAATATAAGCGACACACTCCGGCACCGCA
ACCGAAAAGCCAAAGGCCTCGCTGTGGAGGAAAGCAAACTCGCCGAAGTG
CGCAAGAACTACGCCTTCCGGTGCCCATCACCAATGTCCACACTGAAGGT
TACCGCCGACCTAGAAACCGGCGTCATTCTCCTGGCCACAGGGCTAAACT
TCGCATGCTTCTACGCCGTAATGACCGGAGCGACCACCTCATTCCACAAC
ATCTACCACCTCAACGACATCGATACAGGCCTAATGTATATCCCCATCGG
GGCTGGCGGCATCGTATCAGCATTCACCACGGGCCGTCTAATGGACTGGA
ACTACCGACGCCATGCCGCGCAGGCCGGACTACCTGTTATCCGGAACGTG
CGACAGGACCTCACGAACTTTAATATTGAAAAGGTGAGGCTGCAAGTCGG
CCTACCGATGTACTACGCATGCATAGCGTCCATGATCGCATACGGCTGGG
TCCTCGGCCACAAGGTGAATCTGGCTGCGCCGGTAATCCTACTCTTCATC
TGTGGATGGAGCCTCAATGCTACATCGCAGGTCTTGAATGCAATTCTTGT
TGATCTGTGGCCTGGTCGGTCAGCTGCTGCGACGGCAGCGAGTAATTTGT
TTCGCTGTGAGTTGGGAGCTGCAGCTTCGGCGGCGATTACGCCTATGAGT
GAGGCCATGGGCCAGGGGTGGGCGTATACGACACTGGGGTTGATTGCGGT
GGTTGTGTCGCCGAGTTTGTGGGTGGTTATGGAGAGGGGGATTAAGTGGA
GGCAGAGGAGGTTGAGGAGAGAGCGGGAACGGGCAGCCAGAAATCAGTAG
back to top

Coding sequence (CDS) from alignment at KZ851902.1:1059788..1061387-

>M747DRAFT_358369-T1 ID=M747DRAFT_358369-T1|Name=M747DRAFT_358369-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3084bp|location=Sequence derived from alignment at KZ851902.1:1059788..1061387- (Aspergillus niger ATCC 13496)
ATAATGCAAGGCATAGCTCCCATGTTGATCGCCGGATTCTCAGACACAGC
CGGCAGACGTCCCGCCTACATAATCTGCTTCACCGTCTATATCGCCGCCA
ACCTGGGCCTCGGCATCCAGAACGACTACGGTTCGCTACTCGGTCTGCGA
TGCCTCCAAAGTGCAGGAAGCAGCGGCACCGTGGCCCTGGCCAACGGCCT
CGTTGGAGACCTAGTAACATCAGCGGAACGCGGTACATACATCGCCTTCG
CTTCGCTTGGGAGCATGCTCGGCCCCTCTCTGTCGCCCATCATCGGCGGA
CTCCTCAGCCAATATCTCAACTGGCACTGGATATTTTGGTTCCTTCTCAT
CTTCTCGGGTGCCTTCTTCCTCCCTCTATTACTCTTCCTCCCGGAGACCT
GCCGCAAAGTCGTAGCCGATGGCTCTGTCCCACCCCCCACACTAAACAAA
AATATAAGCGACACACTCCGGCACCGCAACCGAAAAGCCAAAGGCCTCGC
TGTGGAGGAAAGCAAACTCGCCGAAGTGCGCAAGAACTACGCCTTCCGGT
GCCCATCACCAATGTCCACACTGAAGGTTACCGCCGACCTAGAAACCGGC
GTCATTCTCCTGGCCACAGGGCTAAACTTCGCATGCTTCTACGCCGTAAT
GACCGGAGCGACCACCTCATTCCACAACATCTACCACCTCAACGACATCG
ATACAGGCCTAATGTATATCCCCATCGGGGCTGGCGGCATCGTATCAGCA
TTCACCACGGGCCGTCTAATGGACTGGAACTACCGACGCCATGCCGCGCA
GGCCGGACTACCTGTTATCCGGAACGTGCGACAGGACCTCACGAACTTTA
ATATTGAAAAGGTGAGGCTGCAAGTCGGCCTACCGATGTACTACGCATGC
ATAGCGTCCATGATCGCATACGGCTGGGTCCTCGGCCACAAGGTGAATCT
GGCTGCGCCGGTAATCCTACTCTTCATCTGTGGATGGAGCCTCAATGCTA
CATCGCAGGTCTTGAATGCAATTCTTGTTGATCTGTGGCCTGGTCGGTCA
GCTGCTGCGACGGCAGCGAGTAATTTGTTTCGCTGTGAGTTGGGAGCTGC
AGCTTCGGCGGCGATTACGCCTATGAGTGAGGCCATGGGCCAGGGGTGGG
CGTATACGACACTGGGGTTGATTGCGGTGGTTGTGTCGCCGAGTTTGTGG
GTGGTTATGGAGAGGGGGATTAAGTGGAGGCAGAGGAGGTTGAGGAGAGA
GCGGGAACGGGCAGCCAGAAATCAGTAGATGAACGGCAATCCATCCTCTT
CATCAGCTACAGAGACAAACGCCGCCGATCTAGAAAAAGAGCCGAACCAA
GATGCACCACCTAGGCTGGAGGTATTTTCAGTCTTCACAGTCAACCAGAA
GAGAGCCATGGTGGCGACCGGCTCAATGGCGAGCTTTTTCTCGCCTTTGT
CTTCAAGCATCTACTTCCCTGCCATGGACACGATCGCAACAGCGCTGAAT
GTCTCCACATCCAAGATTGATTTGACTGTCACGACCTACCTCATAATGCA
AGGCATAGCTCCCATGTTGATCGCCGGATTCTCAGACACAGCCGGCAGAC
GTCCCGCCTACATAATCTGCTTCACCGTCTATATCGCCGCCAACCTGGGC
CTCGGCATCCAGAACGACTACGGTTCGCTACTCGGTCTGCGATGCCTCCA
AAGTGCAGGAAGCAGCGGCACCGTGGCCCTGGCCAACGGCCTCGTTGGAG
ACCTAGTAACATCAGCGGAACGCGGTACATACATCGCCTTCGCTTCGCTT
GGGAGCATGCTCGGCCCCTCTCTGTCGCCCATCATCGGCGGACTCCTCAG
CCAATATCTCAACTGGCACTGGATATTTTGGTTCCTTCTCATCTTCTCGG
GTGCCTTCTTCCTCCCTCTATTACTCTTCCTCCCGGAGACCTGCCGCAAA
GTCGTAGCCGATGGCTCTGTCCCACCCCCCACACTAAACAAAAATATAAG
CGACACACTCCGGCACCGCAACCGAAAAGCCAAAGGCCTCGCTGTGGAGG
AAAGCAAACTCGCCGAAGTGCGCAAGAACTACGCCTTCCGGTGCCCATCA
CCAATGTCCACACTGAAGGTTACCGCCGACCTAGAAACCGGCGTCATTCT
CCTGGCCACAGGGCTAAACTTCGCATGCTTCTACGCCGTAATGACCGGAG
CGACCACCTCATTCCACAACATCTACCACCTCAACGACATCGATACAGGC
CTAATGTATATCCCCATCGGGGCTGGCGGCATCGTATCAGCATTCACCAC
GGGCCGTCTAATGGACTGGAACTACCGACGCCATGCCGCGCAGGCCGGAC
TACCTGTTATCCGGAACGTGCGACAGGACCTCACGAACTTTAATATTGAA
AAGGTGAGGCTGCAAGTCGGCCTACCGATGTACTACGCATGCATAGCGTC
CATGATCGCATACGGCTGGGTCCTCGGCCACAAGGTGAATCTGGCTGCGC
CGGTAATCCTACTCTTCATCTGTGGATGGAGCCTCAATGCTACATCGCAG
GTCTTGAATGCAATTCTTGTTGATCTGTGGCCTGGTCGGTCAGCTGCTGC
GACGGCAGCGAGTAATTTGTTTCGCTGTGAGTTGGGAGCTGCAGCTTCGG
CGGCGATTACGCCTATGAGTGAGGCCATGGGCCAGGGGTGGGCGTATACG
ACACTGGGGTTGATTGCGGTGGTTGTGTCGCCGAGTTTGTGGGTGGTTAT
GGAGAGGGGGATTAAGTGGAGGCAGAGGAGGTTGAGGAGAGAGCGGGAAC
GGGCAGCCAGAAATCAGTAGATGAACGGCAATCCATCCTCTTCATCAGCT
ACAGAGACAAACGCCGCCGATCTAGAAAAAGAGCCGAACCAAGATGCACC
ACCTAGGCTGGAGGTATTTTCAGTCTTCACAGTCAACCAGAAGAGAGCCA
TGGTGGCGACCGGCTCAATGGCGAGCTTTTTCTCGCCTTTGTCTTCAAGC
ATCTACTTCCCTGCCATGGACACGATCGCAACAGCGCTGAATGTCTCCAC
ATCCAAGATTGATTTGACTGTCACGACCTACCTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_358369M747DRAFT_358369Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_358369-T1M747DRAFT_358369-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_358369-T1.cdsM747DRAFT_358369-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_358369-T1.exon2M747DRAFT_358369-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_358369-T1.exon1M747DRAFT_358369-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
ProductMFS general substrate transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:1059788..1061387 -
Powered by Drupal