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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851949.1:84198..85867- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_360681-T1 ID=M747DRAFT_360681-T1|Name=M747DRAFT_360681-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1670bp|location=Sequence derived from alignment at KZ851949.1:84198..85867- (Aspergillus niger ATCC 13496) ATGCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC
CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATC
AGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGA
GTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT
GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATG
GGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGA
CCTCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT
ATTGGGGTTGGTACACTGGCTATGGTATGGATGAATCTCCGGCCGAATGC
AACATATTGCTTGCTAATATATCTGGCTACTAGGGCGCACCGCTTTATAT
CTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAAT
CCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGC
ATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCA
GATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACT
CACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGT
CTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGA
ATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAAC
AACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATG
GACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGCGTGGGTGT
AGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGC
CCACGCTTTTCCAATTGATCGACCAGAAGGGCGAGATGTCATTGATCTTG
TCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTT
AACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCC
TGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGG
CCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTT
TCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCT
TGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTA
TCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCC
GGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGT
GCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACC
GGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACA
AGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGG
AAGGGAGGCTTGACGTGTGA back to topCoding sequence (CDS) from alignment at KZ851949.1:84198..85867- >M747DRAFT_360681-T1 ID=M747DRAFT_360681-T1|Name=M747DRAFT_360681-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3222bp|location=Sequence derived from alignment at KZ851949.1:84198..85867- (Aspergillus niger ATCC 13496) GGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGGGGAAC CCTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTT ATTGGGTAACGTTCGGCATGAGATTAGTTGATAGTGAAGCTTCATTCCGT GTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTAT CCATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGG AGGATTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTCCATTGAGCGAT CAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGAGCCCA GAAACTCATGGAACAACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAG AGGCTCTGATATGGATGGACCTATTCAGGCCGCAGACCTGGAAGAGGACA GCAGTCGGCGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGC GTTTATTTACTACGCGCCCACGCTTTTCCAATTGATCGACCAGAAGGGCG AGATGTCATTGATCTTGTCAGGTGTATTCAATACCCTCCAGCTTCTCACT GTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGC GATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTATCATTGCCGTGC TGATGGCTCTTTATGGGCCCGACTGGGCTAACCCATCGGCCGGTTGGGGC TGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACATACTC GCCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTT CGAAAGGGGTTGCGTTATCAACTTGCGTCAACTGGCTGTCCAATTTTATT GTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGCACATA CGTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTC TGGTTCCCGAGACAACCGGCAGAACACTGGAGCAGATTGACGAAGTTTTT GGCAATATTAGCAAACAAGCACACCATGAATTTATGAGGGAAACTACTTT CCAAGCGGCTAGAGGGGAAGGGAGGCTTGACGTGTGAATGCATCAAGTGT TGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAGAGGCACCCTTGGT GTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGG GCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGCCTTGCTTCTCTTG GGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATCAGTCATCAATGTC ATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAA AGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTTGTCGGTTGTATCT TCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGGCCCTGACGGTG GTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGACCTCGGCCCAAAA TTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGTATTGGGGTTGGTA CACTGGCTATGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAAC CTGCGGGGAACCCTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGC GGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTAGTTGATAGTGAAG CTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTT GGGGTCGGTATCCATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCGT TGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTC CATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAG GTTAGAGCCCAGAAACTCATGGAACAACAACAGCGCCCGGGCGTGACTGG CATCAAGCGAGAGGCTCTGATATGGATGGACCTATTCAGGCCGCAGACCT GGAAGAGGACAGCAGTCGGCGTGGGTGTAGGGTTTTTCCAACAATTCTCG GGGGTCAATGCGTTTATTTACTACGCGCCCACGCTTTTCCAATTGATCGA CCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTATTCAATACCCTCC AGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGG CGCCCCTTGGCGATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTAT CATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGGGCTAACCCATCGG CCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGG AACACATACTCGCCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAA TGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGCGTCAACTGGCTGT CCAATTTTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGT TATGGCACATACGTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTG GGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACACTGGAGCAGATTG ACGAAGTTTTTGGCAATATTAGCAAACAAGCACACCATGAATTTATGAGG GAAACTACTTTCCAAGCGGCTAGAGGGGAAGGGAGGCTTGACGTGTGAAT GCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAGAG GCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGGAT GGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGCCT TGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATCAG TCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGAGT GAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTTGT CGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGG CCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGACC TCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGTAT TGGGGTTGGTACACTGGCTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0016020 | membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_8519491.1 |
Note | EggNog:ENOG41 |
Note | SMCOG1169:sugar transport protein |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR005829 |
DBxref | InterPro:IPR005828 |
DBxref | InterPro:IPR003663 |
DBxref | PFAM:PF00083 |
DBxref | PFAM:PF07690 |
Product | MFS monosaccharide transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851949.1 | supercontig | KZ851949.1:84198..85867 - |
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