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M747DRAFT_363127-T1, M747DRAFT_363127-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_363127-T1
Unique NameM747DRAFT_363127-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:336807..338339+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_363127-T1 ID=M747DRAFT_363127-T1|Name=M747DRAFT_363127-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1533bp|location=Sequence derived from alignment at KZ851905.1:336807..338339+ (Aspergillus niger ATCC 13496)
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGGTGGTTATCACTCACCCATTAACCTACTATTG
ATAGCTGACGGGAGGCATGCTACGGTCATAGGAAAATCCAGCACAATCAA
ATCTATCGATTGAATCTGGGGAATGAGAGTGAATCCCGGAAGGTCTGTTT
CAAGTTCCTCGATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGC
TCCACCCCGAACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGT
GGTCTCGACACCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGC
TGCCTTGCTTCGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACAT
ACGATGGCAACCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTC
CACCACGTTATCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTAT
TATCAAGGACATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTC
ACAAGGTTACCCTGAACAATCCTGATAAAGCCGGTGTCATGACTATAGTC
GAGTATGATCTGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCT
TACCCGCTCCTTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACT
ACCCGAAGTTATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATC
ATCCGCGACGTCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAA
ACAGATATGGTCTAAGTACGTCAGCGACTTTGCAGATCTATTTAAGCCAG
AAAATTGTGAGGCGGCCTTAGACTGCAGTTCTGAGATGGTTCTTAACGCA
CTAGAACATGCCAAGGACTGTCTTGTCTATCTGGCTGGGTTGAATGAGCA
GAGCATCTTTAATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGC
TAGAGCTGTGCTTCCGCAATCCCGCTCTGTTTGAGCGGGATGTCAATATT
AAGATCAGCAGAGGTGATGCATGTCAGCTGATGTTCGAGTGCACACAGGG
CCTGCCGGGGCTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAA
CCAAGAATTCATTAAGTGCCACCAATCTTTCCGAGATAAATACGGTGTGC
GATACGGTATGTTATCTCATTTATACTTCAGAGTGAGCGAGTCCTAACAA
CCATAGATTGAGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACA
AACTCATTAGTGCAATGAGGATGAACAGTGATAGTGGATGATATGAGATG
CACTACTGCTAGATATCAGGATGGGCAACGGTAAAGAGTGTACTCGAGGA
ATCCACATTATGGAATCACTGGAAGAATATCCTACATCTGAATAATAATG
TAAGGGCGTCAACCTAGCATACCTGGTTGAGCTCTAATGCGCCTTCGCGA
GCATCTTGTTGAACAGAAGCCTACGAATCTTGG
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Coding sequence (CDS) from alignment at KZ851905.1:336807..338339+

>M747DRAFT_363127-T1 ID=M747DRAFT_363127-T1|Name=M747DRAFT_363127-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3600bp|location=Sequence derived from alignment at KZ851905.1:336807..338339+ (Aspergillus niger ATCC 13496)
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGGTGGAAAATCCAGCACAATCAAATCTATCGAT
TGAATCTGGGGAATGAGAGTGAATCCCGGAAGGTCTGTTTCAAGTTCCTC
GATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGCTCCACCCCGA
ACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGTGGTCTCGACA
CCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGCTGCCTTGCTT
CGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACATACGATGGCAA
CCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTCCACCACGTTA
TCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTATTATCAAGGAC
ATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTCACAAGGTTAC
CCTGAACAATCCTGATAAAGCCGGTGTCATGACTATAGTCGAGTATGATC
TGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCTTACCCGCTCC
TTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACTACCCGAAGTT
ATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATCATCCGCGACG
TCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAAACAGATATGG
TCTAAGTACGTCAGCGACTTTGCAGATCTATTTAAGCCAGAAAATTGTGA
GGCGGCCTTAGACTGCAGTTCTGAGATGGTTCTTAACGCACTAGAACATG
CCAAGGACTGTCTTGTCTATCTGGCTGGGTTGAATGAGCAGAGCATCTTT
AATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGCTAGAGCTGTG
CTTCCGCAATCCCGCTCTGTTTGAGCGGGATGTCAATATTAAGATCAGCA
GAGGTGATGCATGTCAGCTGATGTTCGAGTGCACACAGGGCCTGCCGGGG
CTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAACCAAGAATTC
ATTAAGTGCCACCAATCTTTCCGAGATAAATACGGTGTGCGATACGATTG
AGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACAAACTCATTAG
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGGTGGAAAATCCAGCACAATCAAATCTATCGAT
TGAATCTGGGGAATGAGAGTGAATCCCGGAAGGTCTGTTTCAAGTTCCTC
GATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGCTCCACCCCGA
ACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGTGGTCTCGACA
CCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGCTGCCTTGCTT
CGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACATACGATGGCAA
CCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTCCACCACGTTA
TCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTATTATCAAGGAC
ATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTCACAAGGTTAC
CCTGAACAATCCTGATAAAGCCGGTGTCATGACTATAGTCGAGTATGATC
TGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCTTACCCGCTCC
TTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACTACCCGAAGTT
ATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATCATCCGCGACG
TCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAAACAGATATGG
TCTAAGTACGTCAGCGACTTTGCAGATCTATTTAAGCCAGAAAATTGTGA
GGCGGCCTTAGACTGCAGTTCTGAGATGGTTCTTAACGCACTAGAACATG
CCAAGGACTGTCTTGTCTATCTGGCTGGGTTGAATGAGCAGAGCATCTTT
AATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGCTAGAGCTGTG
CTTCCGCAATCCCGCTCTGTTTGAGCGGGATGTCAATATTAAGATCAGCA
GAGGTGATGCATGTCAGCTGATGTTCGAGTGCACACAGGGCCTGCCGGGG
CTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAACCAAGAATTC
ATTAAGTGCCACCAATCTTTCCGAGATAAATACGGTGTGCGATACGATTG
AGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACAAACTCATTAG
ATGGAGTATATCAGCAGCGCTCTCTACTACGTCTTTCATCCATATCAATT
GAGAGATATTCTGAAATGGTGGAAAATCCAGCACAATCAAATCTATCGAT
TGAATCTGGGGAATGAGAGTGAATCCCGGAAGGTCTGTTTCAAGTTCCTC
GATCAGACCGGCCGGAGCTTCAGTGCCGTTATCAAGGAGCTCCACCCCGA
ACTGCTCGTCCCTATTTGTATCTTCTACCTGGTCCTCCGTGGTCTCGACA
CCATAGAAGACGACCCTTCTATTTCTGTGAAGGCTAAGGCTGCCTTGCTT
CGCGGCTTCGAGGATGTATTGGTGAAGGACGGGTGGACATACGATGGCAA
CCGTCCCGAAGAGAAGGACCGCGAACTGCTTGTTCACTTCCACCACGTTA
TCAACGAGTACAAAGCTTTGAAGCCAGCCTGCAGACTTATTATCAAGGAC
ATCACCAGGGTAATGGGTAATGGAATGGCCGACTTCTGTCACAAGGTTAC
CCTGAACAATCCTGATAAAGCCGGTGTCATGACTATAGTCGAGTATGATC
TGTACTGCTATTATGTTGCCGGCTGTGTCGGCGAGGGCCTTACCCGCTCC
TTCATCGAAGCGCAACTTTGCAACTCGTCGTTGCTCGACTACCCGAAGTT
ATCCCGGTCAATGGGTGCCTTCCTCCAGAAGACCAACATCATCCGCGACG
TCAGTGAAGATCACGGAGACCACCGTTGCTTTTGGCCCAAACAGATATGG
TCTAAGTACGTCAGCGACTTTGCAGATCTATTTAAGCCAGAAAATTGTGA
GGCGGCCTTAGACTGCAGTTCTGAGATGGTTCTTAACGCACTAGAACATG
CCAAGGACTGTCTTGTCTATCTGGCTGGGTTGAATGAGCAGAGCATCTTT
AATTTCTGCGCTGTACCCCAGAGCATGGCTATCGCGACGCTAGAGCTGTG
CTTCCGCAATCCCGCTCTGTTTGAGCGGGATGTCAATATTAAGATCAGCA
GAGGTGATGCATGTCAGCTGATGTTCGAGTGCACACAGGGCCTGCCGGGG
CTGTGTCGTATTGTCAGTCGATATGCACGACGCATCAAAACCAAGAATTC
ATTAAGTGCCACCAATCTTTCCGAGATAAATACGGTGTGCGATACGATTG
AGAAAGCGGTCGAAGAATTATTTCATCCGGAAGAAGGACAAACTCATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0051996squalene synthase activity
GO:0004310farnesyl-diphosphate farnesyltransferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006696ergosterol biosynthetic process
GO:0009058biosynthetic process
GO:0008610lipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_363127M747DRAFT_363127Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_363127-T1.exon1M747DRAFT_363127-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_363127-T1.exon2M747DRAFT_363127-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_363127-T1.exon3M747DRAFT_363127-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_363127-T1.cdsM747DRAFT_363127-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_363127-T1.utr3p1M747DRAFT_363127-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_363127-T1M747DRAFT_363127-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519051.2
DBxrefInterPro:IPR033904
DBxrefInterPro:IPR019845
DBxrefInterPro:IPR002060
DBxrefInterPro:IPR006449
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00494
Productsqualene synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:336807..338339 +
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