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M747DRAFT_364642-T1, M747DRAFT_364642-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_364642-T1
Unique NameM747DRAFT_364642-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:240024..241579-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_364642-T1 ID=M747DRAFT_364642-T1|Name=M747DRAFT_364642-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1556bp|location=Sequence derived from alignment at KZ851907.1:240024..241579- (Aspergillus niger ATCC 13496)
TCTCACTGTCTCCTCTCCTAGCCCAGAACTTACTGAGCAGGCAGTAATCC
TCCACCATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCAC
CGTCAGCGCCGGCCCCTGTGACATCTACGAAGCCGGCGACACGCCCTGCG
TAGCCGCGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCC
CTCTATCAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCC
GCTCACAGCCGGTGGCGTCGCCGACGCCTCCGCCCAAGACACCTTCTGTG
CCAACACCACCTGCCTGATCACCATCATCTACGACCAATCCGGCAACGGC
AACCACCTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGA
CGGCTACGACAACCTCGCCAGCGCCATCGGCGCCCCCGTCACCCTCAATG
GCCAAAAGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAAC
AACGAAGCCACCGGCACTGCCACCGGCGACGAGCCCGAAGGCATGTACGC
CGTCCTGGACGGCACGCACTACAACGACGCCTGCTGCTTCGACTACGGCA
ACGCCGAGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATC
TACCTCGGGAACAGCACCACCTGGGGCTACGGCGCCGGCGACGGGCCCTG
GATCATGGTCGATATGGAGAACAACCTCTTCTCCGGTGCTGATGAGGGAT
ATAACTCCGGTGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTC
AAGGGCGGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGG
GTCCCTCTCTACTTACTACAGCGGCGCTCGCCCGGATTACTCCGGCTATA
ACCCCATGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAAC
AGCAACGGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTA
CCCGTCGGACGATGTCGAGAACTCCGTCCAGGAGAACATCGTGGCTGCGA
AATACGTCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCCGGAGAG
GTGGTCTCGCTGCGTGTCACTACGCCCGGTTACACGACGCGGTATATTGC
GCACACTGACACCACTGTGAACACGCAGGTCGTGGACGACGATAGTTCCA
CCACGCTGAAGGAGGAGGCTAGCTGGACCGTGGTGACCGGTCTGGCTAAT
AGTCAGTGCTTCTCGTTCGAGTCGGTTGATACCCCTGGTAGCTATATCCG
GCATTACAACTTTGAGTTGCTGCTTAATGCCAATGATGGCACGAAGCAGT
TCCATGAGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAGGGT
ACTTCGTTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGACATTATGA
TAATGTCCTGTATGCTGCTAGTAATGGCGGTGTGCAGACGTTTGATTCCA
AGACATCGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCT
TCGTAA
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Coding sequence (CDS) from alignment at KZ851907.1:240024..241579-

>M747DRAFT_364642-T1 ID=M747DRAFT_364642-T1|Name=M747DRAFT_364642-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1500bp|location=Sequence derived from alignment at KZ851907.1:240024..241579- (Aspergillus niger ATCC 13496)
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAG
CGCCGGCCCCTGTGACATCTACGAAGCCGGCGACACGCCCTGCGTAGCCG
CGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAT
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCAC
AGCCGGTGGCGTCGCCGACGCCTCCGCCCAAGACACCTTCTGTGCCAACA
CCACCTGCCTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTA
CGACAACCTCGCCAGCGCCATCGGCGCCCCCGTCACCCTCAATGGCCAAA
AGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACTGCCACCGGCGACGAGCCCGAAGGCATGTACGCCGTCCT
GGACGGCACGCACTACAACGACGCCTGCTGCTTCGACTACGGCAACGCCG
AGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGCGACGGGCCCTGGATCAT
GGTCGATATGGAGAACAACCTCTTCTCCGGTGCTGATGAGGGATATAACT
CCGGTGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCT
CTCTACTTACTACAGCGGCGCTCGCCCGGATTACTCCGGCTATAACCCCA
TGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTC
GGACGATGTCGAGAACTCCGTCCAGGAGAACATCGTGGCTGCGAAATACG
TCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCCGGAGAGGTGGTC
TCGCTGCGTGTCACTACGCCCGGTTACACGACGCGGTATATTGCGCACAC
TGACACCACTGTGAACACGCAGGTCGTGGACGACGATAGTTCCACCACGC
TGAAGGAGGAGGCTAGCTGGACCGTGGTGACCGGTCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCTGGTAGCTATATCCGGCATTA
CAACTTTGAGTTGCTGCTTAATGCCAATGATGGCACGAAGCAGTTCCATG
AGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAGGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGACATTATGATAATGT
CCTGTATGCTGCTAGTAATGGCGGTGTGCAGACGTTTGATTCCAAGACAT
CGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046556alpha-L-arabinofuranosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0046373L-arabinose metabolic process
GO:0031221arabinan metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_364642M747DRAFT_364642Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_364642-T1.cdsM747DRAFT_364642-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_364642-T1.exon1M747DRAFT_364642-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_364642-T1.utr5p1M747DRAFT_364642-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_364642-T1M747DRAFT_364642-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:CBM42
NoteCAZy:GH54
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR036195
DBxrefInterPro:IPR007934
DBxrefInterPro:IPR015289
DBxrefPFAM:PF09206
DBxrefPFAM:PF05270
Productarabinofuranosidase B abfB
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:240024..241579 -
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