|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851899.1:482172..483757- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_365913-T1 ID=M747DRAFT_365913-T1|Name=M747DRAFT_365913-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1586bp|location=Sequence derived from alignment at KZ851899.1:482172..483757- (Aspergillus niger ATCC 13496) CAAACTGAATACATAAGGTTAAGACGATGGCAGCTCAACAGTACCGCCAC
AGTCCCCTCGTTCCCAGTGGTCCCATCCCCACGCCGCCATGACCCAGTCC
TTCGTCTCCTTCACCGCCGTCCTGTTGACGGGATTGCTGTCGCATTCCCA
GCCTGCCGCGGCGGTGGGAATCAGCTGCGATCCAAACACCCGTCCATACT
CAGCCTGGATGACAGATAGCGTCATTGCCCGACGAGATGCCATTCTAGGT
GACTTTGCAGCAGGAGATGATATCTACCCGAATATCTCTCGGATCGGGCT
GTTTGAGTCAACCGTCATCCGGTTGAAGGATTACTACGATGCCGATTCTT
GCGGCCAGGTGGATTGGCACAGTTACACGCTGCAGGGCGCGGAAAGCCTT
CTTCCGGCAGTGTTGAATGTTTCGTTTGATGTGAATGCTCCGCTCACTGT
GTTTGCGGCGGGAGATCCTATGTATCACCAGTAAGTCATTCAATCTCACC
ACTTAACTGGCTGGCCTCAGGGACAATCAAACCGACATCTATATTGTTAG
ATACGATCGCGCGCCAAATGAGACCTACAAACAAGCCCTTGATACCCTTC
ACGATGCCTTTAACGCAAGAACCCGCGACTCAGAAGGTCGGACAACACCC
GCGTCAATACCAACAACTCAATCCCATACTCAAAATCCGAAGCATACTAA
TTATATGAATATCCAGGCGCCTTCTGGTACTTCAACCCCTACCCCAACTG
GGGCGTCCTTGAGGGCCTCTACCCTCTCGGCTCCTTCATCTCCATGTGGA
AAACCTACTTCGAGCCCACTAACACCACCCTATCCGACTCCCTAATGCTC
AGCCTCGATCTATTCAAAGACCACTGCCACGACGACTCCAGCGGCCTCCT
CTTCCACGGCTACGACTCCAGCAAGACCGCCTCCTGGGCCGACCCCACCA
CCGGCGCGAGTTCCTACGTCTGGAACCGCGCTCTCGGAAACTGGTTCATG
ACGCTGGTGGATCTACTTGAACGATCAGGCAAAAACAGCGCGATTCTCAA
CGAGACGCAGCGCGACGACGTCTACACGAAATACTGGAATGTCGCTAACA
CGATCATCAACGACGCTGATGAGGAAACTGGATGCTGGTGGCAGGTTATG
TTGCATGGTGGGGAAGAGGGCAACTATATCGAGTCTAGTGGATCAGCTCA
GTTTGTGTATGGATTGTTGAAAGGTGCCAGATTGGGCTATTTGCAGGGGA
AGACACCCAATGGAGTGGGATATACTGATGCGGCCGATAAGTGCTATAAC
TATCTGGTGAGCGAGTTTGTCAAGGAGGAGGCGGATGGCTCGTTGGGGTA
CAATGGGACTGTTGGGGATTGTGGATTGTATGATCCGACCTTTGAGGTAT
GAATTTCTTCTTCTTCCATTCTTTTGTGATTCGGCTGAATGCTAACGCAA
TTGTATTCTCAAAGTACTACACCACCAGACCCATCGAATACAACAACCTC
TTCGGCACTTCGTCTTTCATCCTGGCAAGCTGGGAACATGAGATGTTTGA
GACGGGGTATTATGATTAGCTAGCTAGCTGAGGTGG back to topCoding sequence (CDS) from alignment at KZ851899.1:482172..483757- >M747DRAFT_365913-T1 ID=M747DRAFT_365913-T1|Name=M747DRAFT_365913-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5052bp|location=Sequence derived from alignment at KZ851899.1:482172..483757- (Aspergillus niger ATCC 13496) TACTACACCACCAGACCCATCGAATACAACAACCTCTTCGGCACTTCGTC TTTCATCCTGGCAAGCTGGGAACATGAGATGTTTGAGACGGGGTATTATG ATTAGGCGCCTTCTGGTACTTCAACCCCTACCCCAACTGGGGCGTCCTTG AGGGCCTCTACCCTCTCGGCTCCTTCATCTCCATGTGGAAAACCTACTTC GAGCCCACTAACACCACCCTATCCGACTCCCTAATGCTCAGCCTCGATCT ATTCAAAGACCACTGCCACGACGACTCCAGCGGCCTCCTCTTCCACGGCT ACGACTCCAGCAAGACCGCCTCCTGGGCCGACCCCACCACCGGCGCGAGT TCCTACGTCTGGAACCGCGCTCTCGGAAACTGGTTCATGACGCTGGTGGA TCTACTTGAACGATCAGGCAAAAACAGCGCGATTCTCAACGAGACGCAGC GCGACGACGTCTACACGAAATACTGGAATGTCGCTAACACGATCATCAAC GACGCTGATGAGGAAACTGGATGCTGGTGGCAGGTTATGTTGCATGGTGG GGAAGAGGGCAACTATATCGAGTCTAGTGGATCAGCTCAGTTTGTGTATG GATTGTTGAAAGGTGCCAGATTGGGCTATTTGCAGGGGAAGACACCCAAT GGAGTGGGATATACTGATGCGGCCGATAAGTGCTATAACTATCTGGTGAG CGAGTTTGTCAAGGAGGAGGCGGATGGCTCGTTGGGGTACAATGGGACTG TTGGGGATTGTGGATTGTATGATCCGACCTTTGAGATACGATCGCGCGCC AAATGAGACCTACAAACAAGCCCTTGATACCCTTCACGATGCCTTTAACG CAAGAACCCGCGACTCAGAAGATGACCCAGTCCTTCGTCTCCTTCACCGC CGTCCTGTTGACGGGATTGCTGTCGCATTCCCAGCCTGCCGCGGCGGTGG GAATCAGCTGCGATCCAAACACCCGTCCATACTCAGCCTGGATGACAGAT AGCGTCATTGCCCGACGAGATGCCATTCTAGGTGACTTTGCAGCAGGAGA TGATATCTACCCGAATATCTCTCGGATCGGGCTGTTTGAGTCAACCGTCA TCCGGTTGAAGGATTACTACGATGCCGATTCTTGCGGCCAGGTGGATTGG CACAGTTACACGCTGCAGGGCGCGGAAAGCCTTCTTCCGGCAGTGTTGAA TGTTTCGTTTGATGTGAATGCTCCGCTCACTGTGTTTGCGGCGGGAGATC CTATGTATCACCATACTACACCACCAGACCCATCGAATACAACAACCTCT TCGGCACTTCGTCTTTCATCCTGGCAAGCTGGGAACATGAGATGTTTGAG ACGGGGTATTATGATTAGGCGCCTTCTGGTACTTCAACCCCTACCCCAAC TGGGGCGTCCTTGAGGGCCTCTACCCTCTCGGCTCCTTCATCTCCATGTG GAAAACCTACTTCGAGCCCACTAACACCACCCTATCCGACTCCCTAATGC TCAGCCTCGATCTATTCAAAGACCACTGCCACGACGACTCCAGCGGCCTC CTCTTCCACGGCTACGACTCCAGCAAGACCGCCTCCTGGGCCGACCCCAC CACCGGCGCGAGTTCCTACGTCTGGAACCGCGCTCTCGGAAACTGGTTCA TGACGCTGGTGGATCTACTTGAACGATCAGGCAAAAACAGCGCGATTCTC AACGAGACGCAGCGCGACGACGTCTACACGAAATACTGGAATGTCGCTAA CACGATCATCAACGACGCTGATGAGGAAACTGGATGCTGGTGGCAGGTTA TGTTGCATGGTGGGGAAGAGGGCAACTATATCGAGTCTAGTGGATCAGCT CAGTTTGTGTATGGATTGTTGAAAGGTGCCAGATTGGGCTATTTGCAGGG GAAGACACCCAATGGAGTGGGATATACTGATGCGGCCGATAAGTGCTATA ACTATCTGGTGAGCGAGTTTGTCAAGGAGGAGGCGGATGGCTCGTTGGGG TACAATGGGACTGTTGGGGATTGTGGATTGTATGATCCGACCTTTGAGAT ACGATCGCGCGCCAAATGAGACCTACAAACAAGCCCTTGATACCCTTCAC GATGCCTTTAACGCAAGAACCCGCGACTCAGAAGATGACCCAGTCCTTCG TCTCCTTCACCGCCGTCCTGTTGACGGGATTGCTGTCGCATTCCCAGCCT GCCGCGGCGGTGGGAATCAGCTGCGATCCAAACACCCGTCCATACTCAGC CTGGATGACAGATAGCGTCATTGCCCGACGAGATGCCATTCTAGGTGACT TTGCAGCAGGAGATGATATCTACCCGAATATCTCTCGGATCGGGCTGTTT GAGTCAACCGTCATCCGGTTGAAGGATTACTACGATGCCGATTCTTGCGG CCAGGTGGATTGGCACAGTTACACGCTGCAGGGCGCGGAAAGCCTTCTTC CGGCAGTGTTGAATGTTTCGTTTGATGTGAATGCTCCGCTCACTGTGTTT GCGGCGGGAGATCCTATGTATCACCATACTACACCACCAGACCCATCGAA TACAACAACCTCTTCGGCACTTCGTCTTTCATCCTGGCAAGCTGGGAACA TGAGATGTTTGAGACGGGGTATTATGATTAGGCGCCTTCTGGTACTTCAA CCCCTACCCCAACTGGGGCGTCCTTGAGGGCCTCTACCCTCTCGGCTCCT TCATCTCCATGTGGAAAACCTACTTCGAGCCCACTAACACCACCCTATCC GACTCCCTAATGCTCAGCCTCGATCTATTCAAAGACCACTGCCACGACGA CTCCAGCGGCCTCCTCTTCCACGGCTACGACTCCAGCAAGACCGCCTCCT GGGCCGACCCCACCACCGGCGCGAGTTCCTACGTCTGGAACCGCGCTCTC GGAAACTGGTTCATGACGCTGGTGGATCTACTTGAACGATCAGGCAAAAA CAGCGCGATTCTCAACGAGACGCAGCGCGACGACGTCTACACGAAATACT GGAATGTCGCTAACACGATCATCAACGACGCTGATGAGGAAACTGGATGC TGGTGGCAGGTTATGTTGCATGGTGGGGAAGAGGGCAACTATATCGAGTC TAGTGGATCAGCTCAGTTTGTGTATGGATTGTTGAAAGGTGCCAGATTGG GCTATTTGCAGGGGAAGACACCCAATGGAGTGGGATATACTGATGCGGCC GATAAGTGCTATAACTATCTGGTGAGCGAGTTTGTCAAGGAGGAGGCGGA TGGCTCGTTGGGGTACAATGGGACTGTTGGGGATTGTGGATTGTATGATC CGACCTTTGAGATACGATCGCGCGCCAAATGAGACCTACAAACAAGCCCT TGATACCCTTCACGATGCCTTTAACGCAAGAACCCGCGACTCAGAAGATG ACCCAGTCCTTCGTCTCCTTCACCGCCGTCCTGTTGACGGGATTGCTGTC GCATTCCCAGCCTGCCGCGGCGGTGGGAATCAGCTGCGATCCAAACACCC GTCCATACTCAGCCTGGATGACAGATAGCGTCATTGCCCGACGAGATGCC ATTCTAGGTGACTTTGCAGCAGGAGATGATATCTACCCGAATATCTCTCG GATCGGGCTGTTTGAGTCAACCGTCATCCGGTTGAAGGATTACTACGATG CCGATTCTTGCGGCCAGGTGGATTGGCACAGTTACACGCTGCAGGGCGCG GAAAGCCTTCTTCCGGCAGTGTTGAATGTTTCGTTTGATGTGAATGCTCC GCTCACTGTGTTTGCGGCGGGAGATCCTATGTATCACCATACTACACCAC CAGACCCATCGAATACAACAACCTCTTCGGCACTTCGTCTTTCATCCTGG CAAGCTGGGAACATGAGATGTTTGAGACGGGGTATTATGATTAGGCGCCT TCTGGTACTTCAACCCCTACCCCAACTGGGGCGTCCTTGAGGGCCTCTAC CCTCTCGGCTCCTTCATCTCCATGTGGAAAACCTACTTCGAGCCCACTAA CACCACCCTATCCGACTCCCTAATGCTCAGCCTCGATCTATTCAAAGACC ACTGCCACGACGACTCCAGCGGCCTCCTCTTCCACGGCTACGACTCCAGC AAGACCGCCTCCTGGGCCGACCCCACCACCGGCGCGAGTTCCTACGTCTG GAACCGCGCTCTCGGAAACTGGTTCATGACGCTGGTGGATCTACTTGAAC GATCAGGCAAAAACAGCGCGATTCTCAACGAGACGCAGCGCGACGACGTC TACACGAAATACTGGAATGTCGCTAACACGATCATCAACGACGCTGATGA GGAAACTGGATGCTGGTGGCAGGTTATGTTGCATGGTGGGGAAGAGGGCA ACTATATCGAGTCTAGTGGATCAGCTCAGTTTGTGTATGGATTGTTGAAA GGTGCCAGATTGGGCTATTTGCAGGGGAAGACACCCAATGGAGTGGGATA TACTGATGCGGCCGATAAGTGCTATAACTATCTGGTGAGCGAGTTTGTCA AGGAGGAGGCGGATGGCTCGTTGGGGTACAATGGGACTGTTGGGGATTGT GGATTGTATGATCCGACCTTTGAGATACGATCGCGCGCCAAATGAGACCT ACAAACAAGCCCTTGATACCCTTCACGATGCCTTTAACGCAAGAACCCGC GACTCAGAAGATGACCCAGTCCTTCGTCTCCTTCACCGCCGTCCTGTTGA CGGGATTGCTGTCGCATTCCCAGCCTGCCGCGGCGGTGGGAATCAGCTGC GATCCAAACACCCGTCCATACTCAGCCTGGATGACAGATAGCGTCATTGC CCGACGAGATGCCATTCTAGGTGACTTTGCAGCAGGAGATGATATCTACC CGAATATCTCTCGGATCGGGCTGTTTGAGTCAACCGTCATCCGGTTGAAG GATTACTACGATGCCGATTCTTGCGGCCAGGTGGATTGGCACAGTTACAC GCTGCAGGGCGCGGAAAGCCTTCTTCCGGCAGTGTTGAATGTTTCGTTTG ATGTGAATGCTCCGCTCACTGTGTTTGCGGCGGGAGATCCTATGTATCAC CA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-25) |
Note | CAZy:GH105 |
DBxref | InterPro:IPR008928 |
DBxref | InterPro:IPR010905 |
DBxref | InterPro:IPR012341 |
DBxref | PFAM:PF07470 |
Product | cell wall glycosyl hydrolase YteR |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851899.1 | supercontig | KZ851899.1:482172..483757 - |
|